MGE detailed information
MGE type: IScluster/Tn MGE length: 6140 bp
Accession: NZ_CP089942 Location: 3257905..3264044 Organism: Erwinia tracheiphila strain MDCuke Replicon: chromosome
Accession: NZ_CP089942 Location: 3257905..3264044 Organism: Erwinia tracheiphila strain MDCuke Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LU604_RS17395 (LU604_17395) | 3253029..3253610 | - | 582 | WP_233478875.1 | nucleotide exchange factor GrpE | - |
| LU604_RS17400 (LU604_17400) | 3253736..3254614 | + | 879 | WP_233478876.1 | NAD(+) kinase | - |
| LU604_RS17405 (LU604_17405) | 3254702..3256363 | + | 1662 | WP_233478877.1 | DNA repair protein RecN | - |
| LU604_RS17410 (LU604_17410) | 3256515..3256862 | + | 348 | WP_233478878.1 | outer membrane protein assembly factor BamE | - |
| LU604_RS17415 (LU604_17415) | 3256935..3257852 | - | 918 | Protein_3453 | IS481 family transposase | - |
| LU604_RS17420 (LU604_17420) | 3257905..3259025 | + | 1121 | WP_233478879.1 | IS3 family transposase ISKpn34 | Transposase |
| LU604_RS17425 (LU604_17425) | 3259066..3259200 | - | 135 | Protein_3455 | helix-turn-helix domain-containing protein | - |
| LU604_RS17430 (LU604_17430) | 3259371..3259811 | - | 441 | Protein_3456 | IS200-IS605 family transposase ISSham1 | Transposase |
| LU604_RS17435 (LU604_17435) | 3259955..3260242 | - | 288 | WP_016191801.1 | RnfH family protein | - |
| LU604_RS17440 (LU604_17440) | 3260235..3260669 | - | 435 | WP_016191800.1 | type II toxin-antitoxin system RatA family toxin | - |
| LU604_RS17445 (LU604_17445) | 3260828..3261310 | + | 483 | WP_016191799.1 | SsrA-binding protein SmpB | - |
| LU604_RS17455 (LU604_17455) | 3262010..3262255 | + | 246 | WP_233478880.1 | DinI-like family protein | - |
| LU604_RS17460 (LU604_17460) | 3262357..3262536 | + | 180 | WP_063162134.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LU604_RS17465 (LU604_17465) | 3262558..3262953 | + | 396 | WP_233478881.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LU604_RS17470 (LU604_17470) | 3263004..3264044 | - | 1041 | WP_233478553.1 | IS481 family transposase ISErsp1 | Transposase |
| LU604_RS17475 (LU604_17475) | 3264208..3264567 | + | 360 | WP_233478883.1 | GtrA family protein | - |
| LU604_RS17480 (LU604_17480) | 3264564..3265484 | + | 921 | WP_233478884.1 | glycosyltransferase family 2 protein | - |
| LU604_RS17485 (LU604_17485) | 3265484..3266701 | + | 1218 | WP_233478885.1 | DUF6056 family protein | - |
| LU604_RS17490 (LU604_17490) | 3266749..3267180 | - | 432 | WP_233478886.1 | tail fiber assembly protein | - |
| LU604_RS17495 (LU604_17495) | 3267182..3268225 | - | 1044 | WP_233478887.1 | hypothetical protein | - |
| LU604_RS17500 (LU604_17500) | 3268276..3268881 | - | 606 | WP_233478888.1 | DUF2313 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|