MGE detailed information
MGE type: IScluster/Tn MGE length: 34249 bp
Accession: NZ_CP089940 Location: 4855032..4889280 Organism: Erwinia tracheiphila strain BuffGH Replicon: chromosome
Accession: NZ_CP089940 Location: 4855032..4889280 Organism: Erwinia tracheiphila strain BuffGH Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LU631_RS25235 (LU631_25235) | 4850897..4852618 | - | 1722 | WP_046372101.1 | type III helper protein HopAK1 | - |
| LU631_RS25240 (LU631_25240) | 4852868..4854898 | - | 2031 | WP_016192351.1 | DNA helicase Rep | - |
| LU631_RS25245 (LU631_25245) | 4855032..4855736 | - | 705 | WP_046371935.1 | IS6 family transposase IS26 | Transposase |
| LU631_RS25250 (LU631_25250) | 4855865..4856455 | - | 591 | WP_016192352.1 | Protein kinase OspG | VF |
| LU631_RS25255 (LU631_25255) | 4856526..4856783 | - | 258 | WP_016192353.1 | hypothetical protein | - |
| LU631_RS25260 (LU631_25260) | 4856960..4858077 | + | 1118 | Protein_4990 | IS200-IS605 family transposase ISEc42 | Transposase |
| LU631_RS25265 (LU631_25265) | 4858458..4858748 | + | 291 | WP_232426910.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LU631_RS25270 (LU631_25270) | 4858741..4859058 | + | 318 | WP_016192357.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| LU631_RS25275 (LU631_25275) | 4859165..4859870 | + | 706 | Protein_4993 | IS6 family transposase IS26 | Transposase |
| LU631_RS25280 (LU631_25280) | 4860081..4860377 | + | 297 | WP_016192358.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LU631_RS25285 (LU631_25285) | 4860379..4860663 | + | 285 | WP_013583077.1 | putative addiction module antidote protein | Antitoxin Detail |
| LU631_RS25290 (LU631_25290) | 4860963..4862003 | + | 1041 | WP_046371813.1 | IS481 family transposase ISErsp1 | Transposase |
| LU631_RS25295 (LU631_25295) | 4862323..4863440 | + | 1118 | Protein_4997 | IS200-IS605 family transposase ISEc42 | Transposase |
| LU631_RS25300 (LU631_25300) | 4863534..4863953 | + | 420 | WP_016192361.1 | protein rep | - |
| LU631_RS25305 (LU631_25305) | 4864023..4864631 | + | 609 | WP_016192362.1 | pesticin C-terminus-like muramidase | - |
| LU631_RS25310 (LU631_25310) | 4864628..4865041 | + | 414 | WP_016192363.1 | hypothetical protein | - |
| LU631_RS25315 (LU631_25315) | 4865573..4866277 | + | 705 | WP_046371935.1 | IS6 family transposase IS26 | Transposase |
| LU631_RS25320 (LU631_25320) | 4866330..4866584 | - | 255 | Protein_5002 | hypothetical protein | - |
| LU631_RS25325 (LU631_25325) | 4867390..4867755 | - | 366 | WP_016192365.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| LU631_RS25330 (LU631_25330) | 4867755..4868027 | - | 273 | WP_016192366.1 | hypothetical protein | - |
| LU631_RS25335 (LU631_25335) | 4868093..4868841 | - | 749 | Protein_5005 | plasmid SOS inhibition protein A | - |
| LU631_RS25340 (LU631_25340) | 4868838..4869254 | - | 417 | WP_016192369.1 | conjugation system SOS inhibitor PsiB | - |
| LU631_RS25345 (LU631_25345) | 4869313..4869495 | - | 183 | Protein_5007 | hypothetical protein | - |
| LU631_RS25350 (LU631_25350) | 4869541..4870245 | - | 705 | WP_046371935.1 | IS6 family transposase IS26 | Transposase |
| LU631_RS25355 (LU631_25355) | 4870282..4870530 | - | 249 | WP_046372103.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| LU631_RS25360 (LU631_25360) | 4871302..4872585 | - | 1284 | WP_052734715.1 | IS91 family transposase | - |
| LU631_RS25365 (LU631_25365) | 4872695..4873141 | - | 447 | WP_016192372.1 | winged helix-turn-helix domain-containing protein | - |
| LU631_RS25370 (LU631_25370) | 4873991..4874664 | + | 674 | Protein_5012 | IS1 family transposase ISEic1 | Transposase |
| LU631_RS25375 (LU631_25375) | 4875008..4875169 | + | 162 | Protein_5013 | NCS2 family permease | - |
| LU631_RS25380 (LU631_25380) | 4875308..4876030 | - | 723 | WP_016192375.1 | hypothetical protein | - |
| LU631_RS25385 (LU631_25385) | 4876434..4877568 | - | 1135 | Protein_5015 | IS256 family transposase ISEc39 | Transposase |
| LU631_RS25390 (LU631_25390) | 4877773..4877984 | - | 212 | Protein_5016 | IS630 family transposase | - |
| LU631_RS25395 (LU631_25395) | 4878121..4878825 | + | 705 | WP_016192377.1 | hypothetical protein | - |
| LU631_RS25400 (LU631_25400) | 4878822..4879256 | + | 435 | WP_016192378.1 | hypothetical protein | - |
| LU631_RS26255 | 4879411..4879773 | - | 363 | WP_016192379.1 | IS91 family transposase ISVa3 | Transposase |
| LU631_RS26260 | 4879773..4880036 | - | 264 | WP_052734716.1 | IS91 family transposase ISVa3 | Transposase |
| LU631_RS25410 (LU631_25410) | 4880282..4881566 | - | 1285 | Protein_5021 | IS91 family transposase | - |
| LU631_RS25415 (LU631_25415) | 4881782..4882479 | + | 698 | WP_233481963.1 | IS1 family transposase ISEic1 | Transposase |
| LU631_RS25420 (LU631_25420) | 4882575..4882910 | + | 336 | WP_046372108.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LU631_RS25425 (LU631_25425) | 4882907..4883263 | + | 357 | WP_006122339.1 | hypothetical protein | - |
| LU631_RS25430 (LU631_25430) | 4883671..4883976 | + | 306 | WP_040465786.1 | hypothetical protein | - |
| LU631_RS25435 (LU631_25435) | 4884159..4884332 | + | 174 | WP_016192381.1 | hypothetical protein | - |
| LU631_RS25440 (LU631_25440) | 4884415..4884657 | + | 243 | WP_016192382.1 | hypothetical protein | - |
| LU631_RS25445 (LU631_25445) | 4884647..4884862 | + | 216 | WP_016192383.1 | hypothetical protein | - |
| LU631_RS25450 (LU631_25450) | 4884954..4885277 | + | 324 | WP_016192384.1 | hypothetical protein | - |
| LU631_RS25455 (LU631_25455) | 4885284..4885523 | + | 240 | WP_233481964.1 | hypothetical protein | - |
| LU631_RS25460 (LU631_25460) | 4885664..4886361 | + | 698 | WP_232426908.1 | IS1 family transposase ISEic1 | Transposase |
| LU631_RS25465 (LU631_25465) | 4886843..4886983 | + | 141 | WP_161796965.1 | hypothetical protein | - |
| LU631_RS25470 (LU631_25470) | 4886992..4888206 | + | 1215 | WP_233481965.1 | IS91 family transposase | - |
| LU631_RS25475 (LU631_25475) | 4888360..4888464 | - | 105 | Protein_5034 | IS1 family transposase | - |
| LU631_RS25480 (LU631_25480) | 4888927..4889449 | - | 523 | Protein_5035 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LU631_RS25485 (LU631_25485) | 4889631..4889884 | - | 254 | Protein_5036 | transposase | - |
| LU631_RS25490 (LU631_25490) | 4889893..4890195 | - | 303 | WP_040465787.1 | type II secretion system pilot lipoprotein GspS | - |
| LU631_RS25495 (LU631_25495) | 4890322..4891092 | - | 771 | WP_016192390.1 | A24 family peptidase | - |
| LU631_RS25500 (LU631_25500) | 4891093..4891539 | - | 447 | WP_016192391.1 | type II secretion system protein GspM | - |
| LU631_RS25505 (LU631_25505) | 4891529..4892722 | - | 1194 | WP_233481966.1 | type II secretion system protein GspL | - |
| LU631_RS25510 (LU631_25510) | 4892725..4893624 | - | 900 | WP_016192393.1 | type II secretion system protein GspK | - |
| LU631_RS25515 (LU631_25515) | 4893624..4894175 | - | 552 | WP_016192394.1 | type II secretion system minor pseudopilin GspJ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|