MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 77896 bp
Accession: NZ_CP089940 Location: 4834643..4912538 Organism: Erwinia tracheiphila strain BuffGH Replicon: chromosome
Accession: NZ_CP089940 Location: 4834643..4912538 Organism: Erwinia tracheiphila strain BuffGH Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LU631_RS25130 (LU631_25130) | 4830289..4831413 | + | 1125 | WP_016192334.1 | uroporphyrinogen-III C-methyltransferase | - |
| LU631_RS25135 (LU631_25135) | 4831416..4832606 | + | 1191 | WP_016192335.1 | protoheme IX biogenesis protein HemY | - |
| LU631_RS25165 (LU631_25165) | 4834732..4835472 | - | 741 | WP_016192336.1 | lipopolysaccharide N-acetylmannosaminouronosyltransferase | - |
| LU631_RS25170 (LU631_25170) | 4835503..4836852 | - | 1350 | WP_016192337.1 | ECA oligosaccharide polymerase | - |
| LU631_RS25175 (LU631_25175) | 4836849..4837916 | - | 1068 | WP_016192338.1 | TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase | - |
| LU631_RS25180 (LU631_25180) | 4837913..4839163 | - | 1251 | WP_016192339.1 | lipid III flippase WzxE | - |
| LU631_RS25185 (LU631_25185) | 4839165..4840295 | - | 1131 | WP_016192340.1 | dTDP-4-amino-4,6-dideoxygalactose transaminase | VF |
| LU631_RS25190 (LU631_25190) | 4840300..4841010 | - | 711 | WP_016192341.1 | dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase | - |
| LU631_RS25195 (LU631_25195) | 4841007..4842269 | - | 1263 | WP_016192342.1 | UDP-N-acetyl-D-mannosamine dehydrogenase | VF |
| LU631_RS25200 (LU631_25200) | 4842266..4843396 | - | 1131 | WP_016192343.1 | UDP-N-acetylglucosamine 2-epimerase | VF |
| LU631_RS25205 (LU631_25205) | 4843446..4844474 | - | 1029 | WP_016192344.1 | ECA polysaccharide chain length modulation protein | - |
| LU631_RS25210 (LU631_25210) | 4844529..4845608 | - | 1080 | WP_040465773.1 | Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase | VF |
| LU631_RS25215 (LU631_25215) | 4845923..4847182 | - | 1260 | WP_016192346.1 | Transcription termination factor Rho | VF |
| LU631_RS25220 (LU631_25220) | 4847641..4847973 | - | 333 | WP_016192347.1 | thioredoxin TrxA | - |
| LU631_RS25225 (LU631_25225) | 4848091..4849380 | + | 1290 | WP_016192348.1 | ATP-dependent RNA helicase RhlB | - |
| LU631_RS25230 (LU631_25230) | 4849387..4850871 | + | 1485 | WP_016192349.1 | guanosine-5'-triphosphate,3'-diphosphate diphosphatase | - |
| LU631_RS25235 (LU631_25235) | 4850897..4852618 | - | 1722 | WP_046372101.1 | type III helper protein HopAK1 | - |
| LU631_RS25240 (LU631_25240) | 4852868..4854898 | - | 2031 | WP_016192351.1 | DNA helicase Rep | - |
| LU631_RS25245 (LU631_25245) | 4855032..4855736 | - | 705 | WP_046371935.1 | IS6 family transposase IS26 | Transposase |
| LU631_RS25250 (LU631_25250) | 4855865..4856455 | - | 591 | WP_016192352.1 | Protein kinase OspG | VF |
| LU631_RS25255 (LU631_25255) | 4856526..4856783 | - | 258 | WP_016192353.1 | hypothetical protein | - |
| LU631_RS25260 (LU631_25260) | 4856960..4858077 | + | 1118 | Protein_4990 | IS200-IS605 family transposase ISEc42 | Transposase |
| LU631_RS25265 (LU631_25265) | 4858458..4858748 | + | 291 | WP_232426910.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LU631_RS25270 (LU631_25270) | 4858741..4859058 | + | 318 | WP_016192357.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| LU631_RS25275 (LU631_25275) | 4859165..4859870 | + | 706 | Protein_4993 | IS6 family transposase IS26 | Transposase |
| LU631_RS25280 (LU631_25280) | 4860081..4860377 | + | 297 | WP_016192358.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LU631_RS25285 (LU631_25285) | 4860379..4860663 | + | 285 | WP_013583077.1 | putative addiction module antidote protein | Antitoxin Detail |
| LU631_RS25290 (LU631_25290) | 4860963..4862003 | + | 1041 | WP_046371813.1 | IS481 family transposase ISErsp1 | Transposase |
| LU631_RS25295 (LU631_25295) | 4862323..4863440 | + | 1118 | Protein_4997 | IS200-IS605 family transposase ISEc42 | Transposase |
| LU631_RS25300 (LU631_25300) | 4863534..4863953 | + | 420 | WP_016192361.1 | protein rep | - |
| LU631_RS25305 (LU631_25305) | 4864023..4864631 | + | 609 | WP_016192362.1 | pesticin C-terminus-like muramidase | - |
| LU631_RS25310 (LU631_25310) | 4864628..4865041 | + | 414 | WP_016192363.1 | hypothetical protein | - |
| LU631_RS25315 (LU631_25315) | 4865573..4866277 | + | 705 | WP_046371935.1 | IS6 family transposase IS26 | Transposase |
| LU631_RS25320 (LU631_25320) | 4866330..4866584 | - | 255 | Protein_5002 | hypothetical protein | - |
| LU631_RS25325 (LU631_25325) | 4867390..4867755 | - | 366 | WP_016192365.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| LU631_RS25330 (LU631_25330) | 4867755..4868027 | - | 273 | WP_016192366.1 | hypothetical protein | - |
| LU631_RS25335 (LU631_25335) | 4868093..4868841 | - | 749 | Protein_5005 | plasmid SOS inhibition protein A | - |
| LU631_RS25340 (LU631_25340) | 4868838..4869254 | - | 417 | WP_016192369.1 | conjugation system SOS inhibitor PsiB | - |
| LU631_RS25345 (LU631_25345) | 4869313..4869495 | - | 183 | Protein_5007 | hypothetical protein | - |
| LU631_RS25350 (LU631_25350) | 4869541..4870245 | - | 705 | WP_046371935.1 | IS6 family transposase IS26 | Transposase |
| LU631_RS25355 (LU631_25355) | 4870282..4870530 | - | 249 | WP_046372103.1 | type II toxin-antitoxin system CcdA family antitoxin | - |
| LU631_RS25360 (LU631_25360) | 4871302..4872585 | - | 1284 | WP_052734715.1 | IS91 family transposase | - |
| LU631_RS25365 (LU631_25365) | 4872695..4873141 | - | 447 | WP_016192372.1 | winged helix-turn-helix domain-containing protein | - |
| LU631_RS25370 (LU631_25370) | 4873991..4874664 | + | 674 | Protein_5012 | IS1 family transposase ISEic1 | Transposase |
| LU631_RS25375 (LU631_25375) | 4875008..4875169 | + | 162 | Protein_5013 | NCS2 family permease | - |
| LU631_RS25380 (LU631_25380) | 4875308..4876030 | - | 723 | WP_016192375.1 | hypothetical protein | - |
| LU631_RS25385 (LU631_25385) | 4876434..4877568 | - | 1135 | Protein_5015 | IS256 family transposase ISEc39 | Transposase |
| LU631_RS25390 (LU631_25390) | 4877773..4877984 | - | 212 | Protein_5016 | IS630 family transposase | - |
| LU631_RS25395 (LU631_25395) | 4878121..4878825 | + | 705 | WP_016192377.1 | hypothetical protein | - |
| LU631_RS25400 (LU631_25400) | 4878822..4879256 | + | 435 | WP_016192378.1 | hypothetical protein | - |
| LU631_RS26255 | 4879411..4879773 | - | 363 | WP_016192379.1 | IS91 family transposase ISVa3 | Transposase |
| LU631_RS26260 | 4879773..4880036 | - | 264 | WP_052734716.1 | IS91 family transposase ISVa3 | Transposase |
| LU631_RS25410 (LU631_25410) | 4880282..4881566 | - | 1285 | Protein_5021 | IS91 family transposase | - |
| LU631_RS25415 (LU631_25415) | 4881782..4882479 | + | 698 | WP_233481963.1 | IS1 family transposase ISEic1 | Transposase |
| LU631_RS25420 (LU631_25420) | 4882575..4882910 | + | 336 | WP_046372108.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LU631_RS25425 (LU631_25425) | 4882907..4883263 | + | 357 | WP_006122339.1 | hypothetical protein | - |
| LU631_RS25430 (LU631_25430) | 4883671..4883976 | + | 306 | WP_040465786.1 | hypothetical protein | - |
| LU631_RS25435 (LU631_25435) | 4884159..4884332 | + | 174 | WP_016192381.1 | hypothetical protein | - |
| LU631_RS25440 (LU631_25440) | 4884415..4884657 | + | 243 | WP_016192382.1 | hypothetical protein | - |
| LU631_RS25445 (LU631_25445) | 4884647..4884862 | + | 216 | WP_016192383.1 | hypothetical protein | - |
| LU631_RS25450 (LU631_25450) | 4884954..4885277 | + | 324 | WP_016192384.1 | hypothetical protein | - |
| LU631_RS25455 (LU631_25455) | 4885284..4885523 | + | 240 | WP_233481964.1 | hypothetical protein | - |
| LU631_RS25460 (LU631_25460) | 4885664..4886361 | + | 698 | WP_232426908.1 | IS1 family transposase ISEic1 | Transposase |
| LU631_RS25465 (LU631_25465) | 4886843..4886983 | + | 141 | WP_161796965.1 | hypothetical protein | - |
| LU631_RS25470 (LU631_25470) | 4886992..4888206 | + | 1215 | WP_233481965.1 | IS91 family transposase | - |
| LU631_RS25475 (LU631_25475) | 4888360..4888464 | - | 105 | Protein_5034 | IS1 family transposase | - |
| LU631_RS25480 (LU631_25480) | 4888927..4889449 | - | 523 | Protein_5035 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LU631_RS25485 (LU631_25485) | 4889631..4889884 | - | 254 | Protein_5036 | transposase | - |
| LU631_RS25490 (LU631_25490) | 4889893..4890195 | - | 303 | WP_040465787.1 | type II secretion system pilot lipoprotein GspS | - |
| LU631_RS25495 (LU631_25495) | 4890322..4891092 | - | 771 | WP_016192390.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| LU631_RS25500 (LU631_25500) | 4891093..4891539 | - | 447 | WP_016192391.1 | hypothetical protein | VF |
| LU631_RS25505 (LU631_25505) | 4891529..4892722 | - | 1194 | WP_233481966.1 | type II secretion system protein GspL | - |
| LU631_RS25510 (LU631_25510) | 4892725..4893624 | - | 900 | WP_016192393.1 | type II secretion system protein GspK | - |
| LU631_RS25515 (LU631_25515) | 4893624..4894175 | - | 552 | WP_016192394.1 | type II secretion system minor pseudopilin GspJ | - |
| LU631_RS25520 (LU631_25520) | 4894172..4894567 | - | 396 | WP_016192395.1 | Type II secretion system protein I | VF |
| LU631_RS25525 (LU631_25525) | 4894569..4895012 | - | 444 | WP_016192396.1 | Type II secretion system protein G | VF |
| LU631_RS25530 (LU631_25530) | 4895035..4896234 | - | 1200 | WP_016192397.1 | Type II secretion system protein F | VF |
| LU631_RS25535 (LU631_25535) | 4896224..4897705 | - | 1482 | WP_016192398.1 | Type II secretion system protein E | VF |
| LU631_RS25540 (LU631_25540) | 4897705..4899885 | - | 2181 | WP_233481967.1 | Type II secretion system protein D | VF |
| LU631_RS25545 (LU631_25545) | 4899923..4900429 | - | 507 | WP_233479593.1 | hypothetical protein | VF |
| LU631_RS25550 (LU631_25550) | 4900949..4901624 | - | 676 | Protein_5049 | IS6 family transposase ISEas1 | Transposase |
| LU631_RS25555 (LU631_25555) | 4901793..4901996 | - | 204 | WP_052734718.1 | DUF1471 domain-containing protein | - |
| LU631_RS25560 (LU631_25560) | 4902057..4902841 | + | 785 | Protein_5051 | IS3 family transposase ISSlo2 | Transposase |
| LU631_RS25565 (LU631_25565) | 4902862..4904185 | - | 1324 | Protein_5052 | IS4 family transposase IS1271 | Transposase |
| LU631_RS25570 (LU631_25570) | 4904273..4904659 | + | 387 | Protein_5053 | IS3 family transposase ISAlg | Transposase |
| LU631_RS25575 (LU631_25575) | 4904668..4904796 | - | 129 | Protein_5054 | MBL fold metallo-hydrolase | - |
| LU631_RS25580 (LU631_25580) | 4904912..4905100 | + | 189 | WP_020322936.1 | hypothetical protein | - |
| LU631_RS25585 (LU631_25585) | 4905109..4906308 | + | 1200 | WP_046372110.1 | IS91 family transposase ISSbo1 | Transposase |
| LU631_RS25590 (LU631_25590) | 4906888..4908102 | - | 1215 | WP_046371879.1 | IS91 family transposase | - |
| LU631_RS25595 (LU631_25595) | 4908111..4908251 | - | 141 | WP_161796965.1 | hypothetical protein | - |
| LU631_RS25600 (LU631_25600) | 4908646..4910514 | - | 1869 | WP_016192404.1 | low affinity potassium transporter Kup | - |
| LU631_RS25605 (LU631_25605) | 4910776..4912269 | + | 1494 | WP_016192405.1 | ATPase RavA | - |
| LU631_RS25610 (LU631_25610) | 4912266..4913729 | + | 1464 | WP_016192406.1 | ATPase RavA stimulator ViaA | - |
| LU631_RS25615 (LU631_25615) | 4914233..4914373 | + | 141 | WP_161796965.1 | hypothetical protein | - |
| LU631_RS25620 (LU631_25620) | 4914382..4915596 | + | 1215 | WP_046371879.1 | IS91 family transposase | - |
| LU631_RS25625 (LU631_25625) | 4915834..4916722 | + | 889 | Protein_5064 | transposase | - |
| LU631_RS25630 (LU631_25630) | 4916723..4917058 | + | 336 | WP_072052843.1 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|