MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 76140 bp
Accession: NZ_CP089940 Location: 3929205..4005344 Organism: Erwinia tracheiphila strain BuffGH Replicon: chromosome
Accession: NZ_CP089940 Location: 3929205..4005344 Organism: Erwinia tracheiphila strain BuffGH Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LU631_RS20570 (LU631_20570) | 3924271..3924693 | + | 423 | WP_016190290.1 | Holliday junction resolvase RuvX | - |
| LU631_RS20575 (LU631_20575) | 3924705..3925700 | - | 996 | WP_016190291.1 | type IV pilus twitching motility protein PilT | - |
| LU631_RS20580 (LU631_20580) | 3925715..3926422 | + | 708 | WP_016190292.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| LU631_RS20585 (LU631_20585) | 3926431..3926982 | + | 552 | WP_016190293.1 | YggT family protein | - |
| LU631_RS20590 (LU631_20590) | 3927013..3927609 | + | 597 | WP_016190294.1 | XTP/dITP diphosphatase | - |
| LU631_RS20595 (LU631_20595) | 3927602..3928762 | + | 1161 | WP_016190295.1 | radical SAM family heme chaperone HemW | - |
| LU631_RS20600 (LU631_20600) | 3928909..3929948 | + | 1040 | Protein_4074 | IS481 family transposase ISErsp1 | Transposase |
| LU631_RS20605 (LU631_20605) | 3930009..3930728 | - | 720 | WP_016190298.1 | DUF2884 domain-containing protein | - |
| LU631_RS20610 (LU631_20610) | 3930794..3931120 | - | 327 | WP_016190299.1 | YggL family protein | - |
| LU631_RS20615 (LU631_20615) | 3931120..3931839 | - | 720 | WP_016190300.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| LU631_RS20620 (LU631_20620) | 3931991..3933070 | + | 1080 | WP_016190301.1 | A/G-specific adenine glycosylase | - |
| LU631_RS20625 (LU631_20625) | 3933083..3933355 | + | 273 | WP_016190302.1 | oxidative damage protection protein | - |
| LU631_RS20630 (LU631_20630) | 3933407..3934486 | + | 1080 | WP_016190303.1 | membrane-bound lytic murein transglycosylase MltC | - |
| LU631_RS20635 (LU631_20635) | 3934554..3935381 | - | 828 | WP_016190304.1 | phosphoenolpyruvate hydrolase family protein | - |
| LU631_RS20640 (LU631_20640) | 3935384..3936604 | - | 1221 | WP_016190305.1 | Tm-1-like ATP-binding domain-containing protein | - |
| LU631_RS20645 (LU631_20645) | 3936845..3937501 | + | 657 | WP_040465325.1 | TetR/AcrR family transcriptional regulator | - |
| LU631_RS20650 (LU631_20650) | 3937536..3939680 | - | 2145 | WP_016190307.1 | ornithine decarboxylase | - |
| LU631_RS20655 (LU631_20655) | 3940377..3941080 | + | 704 | Protein_4085 | IS6 family transposase IS26 | Transposase |
| LU631_RS20660 (LU631_20660) | 3941939..3942970 | + | 1032 | WP_233481936.1 | IS91 family transposase | - |
| LU631_RS20665 (LU631_20665) | 3942948..3943163 | + | 216 | WP_233481937.1 | hypothetical protein | - |
| LU631_RS20670 (LU631_20670) | 3943966..3944625 | + | 660 | WP_016190308.1 | hypothetical protein | - |
| LU631_RS20675 (LU631_20675) | 3944626..3944865 | - | 240 | WP_016190309.1 | hypothetical protein | - |
| LU631_RS20680 (LU631_20680) | 3945086..3945247 | - | 162 | WP_071598870.1 | MbeD family mobilization/exclusion protein | - |
| LU631_RS20685 (LU631_20685) | 3945633..3945773 | + | 141 | WP_161796965.1 | hypothetical protein | - |
| LU631_RS20690 (LU631_20690) | 3945782..3946996 | + | 1215 | WP_046371879.1 | IS91 family transposase | - |
| LU631_RS20695 (LU631_20695) | 3947148..3948539 | + | 1392 | Protein_4093 | terminase family protein | - |
| LU631_RS20700 (LU631_20700) | 3948539..3949597 | + | 1059 | WP_046371980.1 | phage portal protein | - |
| LU631_RS20705 (LU631_20705) | 3949668..3950171 | - | 504 | WP_016193219.1 | hypothetical protein | - |
| LU631_RS20710 (LU631_20710) | 3950581..3950964 | - | 384 | WP_046371846.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| LU631_RS20715 (LU631_20715) | 3950961..3951182 | - | 222 | WP_006117881.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LU631_RS20720 (LU631_20720) | 3951249..3951944 | - | 696 | WP_046371847.1 | DNA methylase | - |
| LU631_RS20725 (LU631_20725) | 3952194..3952553 | - | 360 | WP_046371849.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LU631_RS20730 (LU631_20730) | 3952573..3952839 | - | 267 | WP_046371850.1 | hypothetical protein | - |
| LU631_RS20735 (LU631_20735) | 3952805..3955300 | - | 2496 | WP_052734703.1 | replication endonuclease | - |
| LU631_RS20740 (LU631_20740) | 3955300..3955683 | - | 384 | WP_046371981.1 | hypothetical protein | - |
| LU631_RS20745 (LU631_20745) | 3955756..3955998 | - | 243 | WP_016193223.1 | hypothetical protein | - |
| LU631_RS20750 (LU631_20750) | 3956046..3956312 | - | 267 | Protein_4104 | hypothetical protein | - |
| LU631_RS20755 (LU631_20755) | 3956330..3956536 | - | 207 | WP_016193242.1 | hypothetical protein | - |
| LU631_RS20760 (LU631_20760) | 3956533..3957375 | - | 843 | WP_016193243.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| LU631_RS20765 (LU631_20765) | 3957372..3957944 | - | 573 | WP_016193244.1 | 3'-5' exonuclease | - |
| LU631_RS20770 (LU631_20770) | 3958014..3958406 | - | 393 | WP_040465952.1 | hypothetical protein | - |
| LU631_RS20775 (LU631_20775) | 3958576..3958812 | - | 237 | WP_040465953.1 | hypothetical protein | - |
| LU631_RS20780 (LU631_20780) | 3959150..3959389 | - | 240 | WP_016193245.1 | hypothetical protein | - |
| LU631_RS20785 (LU631_20785) | 3959358..3959540 | - | 183 | WP_016193246.1 | hypothetical protein | - |
| LU631_RS20790 (LU631_20790) | 3959772..3960203 | - | 432 | WP_233481908.1 | hypothetical protein | - |
| LU631_RS20795 (LU631_20795) | 3960309..3960590 | + | 282 | WP_046372033.1 | helix-turn-helix transcriptional regulator | - |
| LU631_RS20800 (LU631_20800) | 3960675..3961694 | + | 1020 | WP_046371854.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LU631_RS20805 (LU631_20805) | 3961805..3962113 | - | 309 | WP_016193234.1 | hypothetical protein | - |
| LU631_RS20810 (LU631_20810) | 3962718..3963278 | - | 561 | WP_016193233.1 | hypothetical protein | - |
| LU631_RS20815 (LU631_20815) | 3963587..3964497 | - | 911 | Protein_4117 | hypothetical protein ; Integrase | Integrase |
| LU631_RS20820 (LU631_20820) | 3965482..3966654 | - | 1173 | WP_232426941.1 | hypothetical protein | - |
| LU631_RS20825 (LU631_20825) | 3966899..3967186 | + | 288 | WP_016193230.1 | hypothetical protein | - |
| LU631_RS20830 (LU631_20830) | 3967224..3968483 | - | 1260 | WP_046372034.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| LU631_RS20835 (LU631_20835) | 3968494..3968829 | - | 336 | WP_016192757.1 | hypothetical protein | - |
| LU631_RS20840 (LU631_20840) | 3968831..3970249 | - | 1419 | WP_016192758.1 | integrating conjugative element protein | - |
| LU631_RS20845 (LU631_20845) | 3970261..3971232 | - | 972 | WP_016192759.1 | TIGR03756 family integrating conjugative element protein | - |
| LU631_RS20850 (LU631_20850) | 3971229..3971633 | - | 405 | WP_016192760.1 | TIGR03757 family integrating conjugative element protein | - |
| LU631_RS20855 (LU631_20855) | 3971804..3972424 | - | 621 | WP_046372035.1 | hypothetical protein | - |
| LU631_RS20860 (LU631_20860) | 3972387..3973247 | - | 861 | WP_233481938.1 | ATP-binding protein | - |
| LU631_RS20865 (LU631_20865) | 3973585..3974625 | - | 1041 | WP_046372036.1 | IS481 family transposase ISErsp1 | Transposase |
| LU631_RS20870 (LU631_20870) | 3974736..3975410 | + | 675 | WP_233481939.1 | hypothetical protein | - |
| LU631_RS20875 (LU631_20875) | 3975426..3975845 | + | 420 | WP_046372037.1 | hypothetical protein | - |
| LU631_RS20880 (LU631_20880) | 3975930..3976334 | - | 405 | WP_016192058.1 | hypothetical protein | - |
| LU631_RS20885 (LU631_20885) | 3976331..3979143 | - | 2813 | Protein_4131 | conjugative transfer ATPase | - |
| LU631_RS20890 (LU631_20890) | 3979143..3979547 | - | 405 | WP_016192002.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| LU631_RS20895 (LU631_20895) | 3979534..3979794 | - | 261 | WP_152664198.1 | hypothetical protein | - |
| LU631_RS20900 (LU631_20900) | 3979939..3980178 | - | 240 | WP_232426902.1 | TIGR03758 family integrating conjugative element protein | - |
| LU631_RS20905 (LU631_20905) | 3980175..3980478 | - | 304 | Protein_4135 | RAQPRD family integrative conjugative element protein | - |
| LU631_RS20910 (LU631_20910) | 3980786..3981289 | - | 504 | WP_046371978.1 | IS1 family transposase ISEic1 | Transposase |
| LU631_RS20915 (LU631_20915) | 3981208..3981483 | - | 276 | WP_072052824.1 | IS1-like element transposase | - |
| LU631_RS20920 (LU631_20920) | 3981515..3981778 | - | 264 | WP_046372289.1 | hypothetical protein | - |
| LU631_RS20925 (LU631_20925) | 3982277..3982552 | - | 276 | WP_016192006.1 | hypothetical protein | - |
| LU631_RS20930 (LU631_20930) | 3982695..3982844 | - | 150 | WP_016192007.1 | hypothetical protein | - |
| LU631_RS20935 (LU631_20935) | 3983190..3983681 | - | 492 | WP_016192008.1 | Major exported protein | VF |
| LU631_RS20940 (LU631_20940) | 3983923..3984441 | - | 519 | WP_016192010.1 | DUF2778 domain-containing protein | - |
| LU631_RS20945 (LU631_20945) | 3984951..3985643 | + | 693 | WP_016192012.1 | replication initiation protein | - |
| LU631_RS20950 (LU631_20950) | 3985640..3985888 | + | 249 | WP_016192013.1 | hypothetical protein | - |
| LU631_RS20955 (LU631_20955) | 3986038..3986241 | - | 204 | WP_016192014.1 | AlpA family transcriptional regulator | - |
| LU631_RS20960 (LU631_20960) | 3986819..3987828 | - | 1010 | Protein_4146 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LU631_RS20965 (LU631_20965) | 3987877..3989514 | - | 1638 | WP_232426892.1 | TraI domain-containing protein | - |
| LU631_RS20970 (LU631_20970) | 3989490..3990244 | - | 755 | Protein_4148 | ATP-binding domain-containing protein | - |
| LU631_RS20975 (LU631_20975) | 3990652..3991745 | + | 1094 | Protein_4149 | IS3 family transposase ISSlo2 | Transposase |
| LU631_RS20980 (LU631_20980) | 3991752..3993074 | - | 1323 | WP_046371900.1 | IS4 family transposase IS1271 | Transposase |
| LU631_RS20985 (LU631_20985) | 3993146..3993268 | + | 123 | Protein_4151 | ATP-binding protein | - |
| LU631_RS20990 (LU631_20990) | 3993829..3995547 | + | 1719 | WP_232426893.1 | polysaccharide lyase family protein | - |
| LU631_RS20995 (LU631_20995) | 3995765..3996508 | + | 744 | WP_016192019.1 | oligogalacturonate-specific porin KdgM family protein | - |
| LU631_RS21000 (LU631_21000) | 3996854..3997369 | - | 516 | Protein_4154 | 2-isopropylmalate synthase | - |
| LU631_RS21005 (LU631_21005) | 3997868..3998407 | - | 540 | WP_016192021.1 | hypothetical protein | VF |
| LU631_RS21010 (LU631_21010) | 3998469..3999935 | - | 1467 | WP_198292540.1 | Catalase | VF |
| LU631_RS21015 (LU631_21015) | 4000813..4001295 | - | 483 | WP_016192024.1 | hypothetical protein | VF |
| LU631_RS21020 (LU631_21020) | 4002661..4003854 | + | 1194 | WP_157275252.1 | hypothetical protein | - |
| LU631_RS21025 (LU631_21025) | 4004304..4005344 | - | 1041 | WP_046371791.1 | IS481 family transposase ISErsp1 | Transposase |
| LU631_RS26210 | 4005511..4005942 | - | 432 | WP_046372013.1 | IS91 family transposase | - |
| LU631_RS26215 | 4005954..4006724 | - | 771 | WP_267921497.1 | transposase zinc-binding domain-containing protein | - |
| LU631_RS21035 (LU631_21035) | 4006733..4006873 | - | 141 | WP_161796965.1 | hypothetical protein | - |
| LU631_RS21040 (LU631_21040) | 4007909..4008421 | + | 513 | WP_016192027.1 | AraC family ligand binding domain-containing protein | - |
| LU631_RS21045 (LU631_21045) | 4009082..4009261 | + | 180 | WP_232426894.1 | hypothetical protein | - |
| LU631_RS21050 (LU631_21050) | 4009286..4009630 | + | 345 | WP_232426895.1 | 2OG-Fe dioxygenase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|