MGE detailed information
MGE type: Prophage MGE length: 47381 bp
Accession: NZ_CP089934 Location: 3199754..3247134 Organism: Erwinia tracheiphila strain SCR3 Replicon: chromosome
Accession: NZ_CP089934 Location: 3199754..3247134 Organism: Erwinia tracheiphila strain SCR3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LU632_RS16945 (LU632_16945) | 3195329..3196306 | - | 978 | WP_016191813.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
| LU632_RS16950 (LU632_16950) | 3196438..3197169 | + | 732 | WP_233480829.1 | outer membrane protein assembly factor BamD | - |
| LU632_RS16955 (LU632_16955) | 3197491..3197832 | + | 342 | WP_233478873.1 | ribosome-associated translation inhibitor RaiA | - |
| LU632_RS16960 (LU632_16960) | 3198415..3199575 | + | 1161 | WP_233478874.1 | bifunctional chorismate mutase/prephenate dehydratase | - |
| LU632_RS16965 (LU632_16965) | 3199754..3200137 | - | 384 | WP_016191809.1 | autonomous glycyl radical cofactor GrcA | - |
| LU632_RS16970 (LU632_16970) | 3200422..3201099 | + | 678 | WP_016191808.1 | uracil-DNA glycosylase | - |
| LU632_RS16975 (LU632_16975) | 3201186..3201767 | - | 582 | WP_233478875.1 | nucleotide exchange factor GrpE | - |
| LU632_RS16980 (LU632_16980) | 3201893..3202771 | + | 879 | WP_233478876.1 | NAD(+) kinase | - |
| LU632_RS16985 (LU632_16985) | 3202859..3204520 | + | 1662 | WP_233478877.1 | DNA repair protein RecN | VF |
| LU632_RS16990 (LU632_16990) | 3204672..3205019 | + | 348 | WP_233478878.1 | outer membrane protein assembly factor BamE | - |
| LU632_RS16995 (LU632_16995) | 3205092..3206009 | - | 918 | Protein_3365 | IS481 family transposase | - |
| LU632_RS17000 (LU632_17000) | 3206062..3207182 | + | 1121 | WP_233478879.1 | IS3 family transposase ISKpn34 | Transposase |
| LU632_RS17005 (LU632_17005) | 3207223..3207357 | - | 135 | Protein_3367 | helix-turn-helix domain-containing protein | - |
| LU632_RS17010 (LU632_17010) | 3207528..3207968 | - | 441 | Protein_3368 | IS200-IS605 family transposase ISSham1 | Transposase |
| LU632_RS17015 (LU632_17015) | 3208112..3208399 | - | 288 | WP_016191801.1 | RnfH family protein | - |
| LU632_RS17020 (LU632_17020) | 3208392..3208826 | - | 435 | WP_016191800.1 | type II toxin-antitoxin system RatA family toxin | - |
| LU632_RS17025 (LU632_17025) | 3208985..3209467 | + | 483 | WP_016191799.1 | SsrA-binding protein SmpB | - |
| LU632_RS17035 (LU632_17035) | 3210167..3210412 | + | 246 | WP_233478880.1 | DinI-like family protein | - |
| LU632_RS17040 (LU632_17040) | 3210514..3210693 | + | 180 | WP_063162134.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LU632_RS17045 (LU632_17045) | 3210715..3211110 | + | 396 | WP_233478881.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LU632_RS17050 (LU632_17050) | 3211161..3212201 | - | 1041 | WP_233478882.1 | IS481 family transposase ISErsp1 | Transposase |
| LU632_RS17055 (LU632_17055) | 3212365..3212724 | + | 360 | WP_233478883.1 | Prophage bactoprenol-linked glucose translocase | VF |
| LU632_RS17060 (LU632_17060) | 3212721..3213641 | + | 921 | WP_233478884.1 | Prophage bactoprenol glucosyl transferase | VF |
| LU632_RS17065 (LU632_17065) | 3213641..3214858 | + | 1218 | WP_233478885.1 | DUF6056 family protein | - |
| LU632_RS17070 (LU632_17070) | 3214906..3215337 | - | 432 | WP_233478886.1 | tail fiber assembly protein | - |
| LU632_RS17075 (LU632_17075) | 3215339..3216382 | - | 1044 | WP_233478887.1 | hypothetical protein | - |
| LU632_RS17080 (LU632_17080) | 3216433..3217038 | - | 606 | WP_233478888.1 | DUF2313 domain-containing protein | - |
| LU632_RS17085 (LU632_17085) | 3217035..3218189 | - | 1155 | WP_233478889.1 | baseplate J/gp47 family protein | - |
| LU632_RS17090 (LU632_17090) | 3218161..3218625 | - | 465 | WP_233478890.1 | phage GP46 family protein | - |
| LU632_RS17095 (LU632_17095) | 3218625..3219212 | - | 588 | WP_233478891.1 | phage baseplate assembly protein | - |
| LU632_RS17100 (LU632_17100) | 3219209..3220282 | - | 1074 | WP_233478892.1 | phage tail protein | - |
| () | 3220269..3221684 | - | 1416 | WP_23347 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|