MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 76140 bp
Accession: NZ_CP089932 Location: 3665016..3741155 Organism: Erwinia tracheiphila strain BHKY Replicon: chromosome
Accession: NZ_CP089932 Location: 3665016..3741155 Organism: Erwinia tracheiphila strain BHKY Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LU633_RS19020 (LU633_19020) | 3660082..3660504 | + | 423 | WP_016190290.1 | Holliday junction resolvase RuvX | - |
| LU633_RS19025 (LU633_19025) | 3660516..3661511 | - | 996 | WP_016190291.1 | type IV pilus twitching motility protein PilT | - |
| LU633_RS19030 (LU633_19030) | 3661526..3662233 | + | 708 | WP_016190292.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| LU633_RS19035 (LU633_19035) | 3662242..3662793 | + | 552 | WP_016190293.1 | YggT family protein | - |
| LU633_RS19040 (LU633_19040) | 3662824..3663420 | + | 597 | WP_016190294.1 | XTP/dITP diphosphatase | - |
| LU633_RS19045 (LU633_19045) | 3663413..3664573 | + | 1161 | WP_016190295.1 | radical SAM family heme chaperone HemW | - |
| LU633_RS19050 (LU633_19050) | 3664720..3665759 | + | 1040 | Protein_3753 | IS481 family transposase ISErsp1 | Transposase |
| LU633_RS19055 (LU633_19055) | 3665820..3666539 | - | 720 | WP_016190298.1 | DUF2884 domain-containing protein | - |
| LU633_RS19060 (LU633_19060) | 3666605..3666931 | - | 327 | WP_016190299.1 | YggL family protein | - |
| LU633_RS19065 (LU633_19065) | 3666931..3667650 | - | 720 | WP_016190300.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| LU633_RS19070 (LU633_19070) | 3667802..3668881 | + | 1080 | WP_016190301.1 | A/G-specific adenine glycosylase | - |
| LU633_RS19075 (LU633_19075) | 3668894..3669166 | + | 273 | WP_016190302.1 | oxidative damage protection protein | - |
| LU633_RS19080 (LU633_19080) | 3669218..3670297 | + | 1080 | WP_016190303.1 | membrane-bound lytic murein transglycosylase MltC | - |
| LU633_RS19085 (LU633_19085) | 3670365..3671192 | - | 828 | WP_016190304.1 | phosphoenolpyruvate hydrolase family protein | - |
| LU633_RS19090 (LU633_19090) | 3671195..3672415 | - | 1221 | WP_016190305.1 | Tm-1-like ATP-binding domain-containing protein | - |
| LU633_RS19095 (LU633_19095) | 3672656..3673312 | + | 657 | WP_040465325.1 | TetR/AcrR family transcriptional regulator | - |
| LU633_RS19100 (LU633_19100) | 3673347..3675491 | - | 2145 | WP_016190307.1 | ornithine decarboxylase | - |
| LU633_RS19105 (LU633_19105) | 3676188..3676891 | + | 704 | Protein_3764 | IS6 family transposase IS26 | Transposase |
| LU633_RS19110 (LU633_19110) | 3677750..3678781 | + | 1032 | WP_233481936.1 | IS91 family transposase | - |
| LU633_RS19115 (LU633_19115) | 3678759..3678974 | + | 216 | WP_233481937.1 | hypothetical protein | - |
| LU633_RS19120 (LU633_19120) | 3679777..3680436 | + | 660 | WP_016190308.1 | hypothetical protein | - |
| LU633_RS19125 (LU633_19125) | 3680437..3680676 | - | 240 | WP_016190309.1 | hypothetical protein | - |
| LU633_RS19130 (LU633_19130) | 3680897..3681058 | - | 162 | WP_071598870.1 | MbeD family mobilization/exclusion protein | - |
| LU633_RS19135 (LU633_19135) | 3681444..3681584 | + | 141 | WP_161796965.1 | hypothetical protein | - |
| LU633_RS19140 (LU633_19140) | 3681593..3682807 | + | 1215 | WP_046371879.1 | IS91 family transposase | - |
| LU633_RS19145 (LU633_19145) | 3682959..3684350 | + | 1392 | Protein_3772 | terminase family protein | - |
| LU633_RS19150 (LU633_19150) | 3684350..3685408 | + | 1059 | WP_046371980.1 | phage portal protein | - |
| LU633_RS19155 (LU633_19155) | 3685479..3685982 | - | 504 | WP_016193219.1 | hypothetical protein | - |
| LU633_RS19160 (LU633_19160) | 3686392..3686775 | - | 384 | WP_046371846.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| LU633_RS19165 (LU633_19165) | 3686772..3686993 | - | 222 | WP_006117881.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LU633_RS19170 (LU633_19170) | 3687060..3687755 | - | 696 | WP_046371847.1 | DNA methylase | - |
| LU633_RS19175 (LU633_19175) | 3688005..3688364 | - | 360 | WP_046371849.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LU633_RS19180 (LU633_19180) | 3688384..3688650 | - | 267 | WP_046371850.1 | hypothetical protein | - |
| LU633_RS19185 (LU633_19185) | 3688616..3691111 | - | 2496 | WP_052734703.1 | replication endonuclease | - |
| LU633_RS19190 (LU633_19190) | 3691111..3691494 | - | 384 | WP_046371981.1 | hypothetical protein | - |
| LU633_RS19195 (LU633_19195) | 3691567..3691809 | - | 243 | WP_016193223.1 | hypothetical protein | - |
| LU633_RS19200 (LU633_19200) | 3691857..3692123 | - | 267 | Protein_3783 | hypothetical protein | - |
| LU633_RS19205 (LU633_19205) | 3692141..3692347 | - | 207 | WP_016193242.1 | hypothetical protein | - |
| LU633_RS19210 (LU633_19210) | 3692344..3693186 | - | 843 | WP_016193243.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| LU633_RS19215 (LU633_19215) | 3693183..3693743 | - | 561 | WP_233479716.1 | 3'-5' exonuclease | - |
| LU633_RS19220 (LU633_19220) | 3693825..3694217 | - | 393 | WP_040465952.1 | hypothetical protein | - |
| LU633_RS19225 (LU633_19225) | 3694387..3694623 | - | 237 | WP_040465953.1 | hypothetical protein | - |
| LU633_RS19230 (LU633_19230) | 3694961..3695200 | - | 240 | WP_016193245.1 | hypothetical protein | - |
| LU633_RS19235 (LU633_19235) | 3695169..3695351 | - | 183 | WP_016193246.1 | hypothetical protein | - |
| LU633_RS19240 (LU633_19240) | 3695583..3696014 | - | 432 | WP_233481908.1 | hypothetical protein | - |
| LU633_RS19245 (LU633_19245) | 3696120..3696401 | + | 282 | WP_046372033.1 | helix-turn-helix transcriptional regulator | - |
| LU633_RS19250 (LU633_19250) | 3696486..3697505 | + | 1020 | WP_046371854.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LU633_RS19255 (LU633_19255) | 3697616..3697924 | - | 309 | WP_016193234.1 | hypothetical protein | - |
| LU633_RS19260 (LU633_19260) | 3698529..3699089 | - | 561 | WP_016193233.1 | hypothetical protein | - |
| LU633_RS19265 (LU633_19265) | 3699398..3700308 | - | 911 | Protein_3796 | hypothetical protein ; Integrase | Integrase |
| LU633_RS19270 (LU633_19270) | 3701293..3702465 | - | 1173 | WP_232426941.1 | hypothetical protein | - |
| LU633_RS19275 (LU633_19275) | 3702710..3702997 | + | 288 | WP_016193230.1 | hypothetical protein | - |
| LU633_RS19280 (LU633_19280) | 3703035..3704294 | - | 1260 | WP_046372034.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| LU633_RS19285 (LU633_19285) | 3704305..3704640 | - | 336 | WP_016192757.1 | hypothetical protein | - |
| LU633_RS19290 (LU633_19290) | 3704642..3706060 | - | 1419 | WP_016192758.1 | integrating conjugative element protein | - |
| LU633_RS19295 (LU633_19295) | 3706072..3707043 | - | 972 | WP_016192759.1 | TIGR03756 family integrating conjugative element protein | - |
| LU633_RS19300 (LU633_19300) | 3707040..3707444 | - | 405 | WP_016192760.1 | TIGR03757 family integrating conjugative element protein | - |
| LU633_RS19305 (LU633_19305) | 3707615..3708235 | - | 621 | WP_046372035.1 | hypothetical protein | - |
| LU633_RS19310 (LU633_19310) | 3708198..3709058 | - | 861 | WP_233481938.1 | ATP-binding protein | - |
| LU633_RS19315 (LU633_19315) | 3709396..3710436 | - | 1041 | WP_046372036.1 | IS481 family transposase ISErsp1 | Transposase |
| LU633_RS19320 (LU633_19320) | 3710547..3711221 | + | 675 | WP_233481939.1 | hypothetical protein | - |
| LU633_RS19325 (LU633_19325) | 3711237..3711656 | + | 420 | WP_046372037.1 | hypothetical protein | - |
| LU633_RS19330 (LU633_19330) | 3711741..3712145 | - | 405 | WP_016192058.1 | hypothetical protein | - |
| LU633_RS19335 (LU633_19335) | 3712142..3714954 | - | 2813 | Protein_3810 | conjugative transfer ATPase | - |
| LU633_RS19340 (LU633_19340) | 3714954..3715358 | - | 405 | WP_016192002.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| LU633_RS19345 (LU633_19345) | 3715345..3715605 | - | 261 | WP_152664198.1 | hypothetical protein | - |
| LU633_RS19350 (LU633_19350) | 3715750..3715989 | - | 240 | WP_232426902.1 | TIGR03758 family integrating conjugative element protein | - |
| LU633_RS19355 (LU633_19355) | 3715986..3716289 | - | 304 | Protein_3814 | RAQPRD family integrative conjugative element protein | - |
| LU633_RS19360 (LU633_19360) | 3716597..3717100 | - | 504 | WP_046371978.1 | IS1 family transposase ISEic1 | Transposase |
| LU633_RS19365 (LU633_19365) | 3717019..3717294 | - | 276 | WP_072052824.1 | IS1-like element transposase | - |
| LU633_RS19370 (LU633_19370) | 3717326..3717589 | - | 264 | WP_046372289.1 | hypothetical protein | - |
| LU633_RS19375 (LU633_19375) | 3718088..3718363 | - | 276 | WP_016192006.1 | hypothetical protein | - |
| LU633_RS19380 (LU633_19380) | 3718506..3718655 | - | 150 | WP_016192007.1 | hypothetical protein | - |
| LU633_RS19385 (LU633_19385) | 3719001..3719492 | - | 492 | WP_016192008.1 | Major exported protein | VF |
| LU633_RS19390 (LU633_19390) | 3719734..3720252 | - | 519 | WP_016192010.1 | DUF2778 domain-containing protein | - |
| LU633_RS19395 (LU633_19395) | 3720762..3721454 | + | 693 | WP_016192012.1 | replication initiation protein | - |
| LU633_RS19400 (LU633_19400) | 3721451..3721699 | + | 249 | WP_016192013.1 | hypothetical protein | - |
| LU633_RS19405 (LU633_19405) | 3721849..3722052 | - | 204 | WP_016192014.1 | AlpA family transcriptional regulator | - |
| LU633_RS19410 (LU633_19410) | 3722630..3723639 | - | 1010 | Protein_3825 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LU633_RS19415 (LU633_19415) | 3723688..3725325 | - | 1638 | WP_232426892.1 | TraI domain-containing protein | - |
| LU633_RS19420 (LU633_19420) | 3725301..3726055 | - | 755 | Protein_3827 | ATP-binding domain-containing protein | - |
| LU633_RS19425 (LU633_19425) | 3726463..3727556 | + | 1094 | Protein_3828 | IS3 family transposase ISSlo2 | Transposase |
| LU633_RS19430 (LU633_19430) | 3727563..3728885 | - | 1323 | WP_046371900.1 | IS4 family transposase IS1271 | Transposase |
| LU633_RS19435 (LU633_19435) | 3728957..3729079 | + | 123 | Protein_3830 | ATP-binding protein | - |
| LU633_RS19440 (LU633_19440) | 3729640..3731358 | + | 1719 | WP_232426893.1 | polysaccharide lyase family protein | - |
| LU633_RS19445 (LU633_19445) | 3731576..3732319 | + | 744 | WP_016192019.1 | oligogalacturonate-specific porin KdgM family protein | - |
| LU633_RS19450 (LU633_19450) | 3732665..3733180 | - | 516 | Protein_3833 | 2-isopropylmalate synthase | - |
| LU633_RS19455 (LU633_19455) | 3733679..3734218 | - | 540 | WP_016192021.1 | hypothetical protein | VF |
| LU633_RS19460 (LU633_19460) | 3734280..3735746 | - | 1467 | WP_198292540.1 | Catalase | VF |
| LU633_RS19465 (LU633_19465) | 3736624..3737106 | - | 483 | WP_016192024.1 | hypothetical protein | VF |
| LU633_RS19470 (LU633_19470) | 3738472..3739665 | + | 1194 | WP_157275252.1 | hypothetical protein | - |
| LU633_RS19475 (LU633_19475) | 3740115..3741155 | - | 1041 | WP_046371791.1 | IS481 family transposase ISErsp1 | Transposase |
| LU633_RS19480 (LU633_19480) | 3741322..3742536 | - | 1215 | WP_046371879.1 | IS91 family transposase | - |
| LU633_RS19485 (LU633_19485) | 3742545..3742685 | - | 141 | WP_161796965.1 | hypothetical protein | - |
| LU633_RS19490 (LU633_19490) | 3743721..3744233 | + | 513 | WP_016192027.1 | AraC family ligand binding domain-containing protein | - |
| LU633_RS19495 (LU633_19495) | 3744894..3745073 | + | 180 | WP_232426894.1 | hypothetical protein | - |
| LU633_RS19500 (LU633_19500) | 3745098..3745442 | + | 345 | WP_232426895.1 | 2OG-Fe dioxygenase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|