MGE detailed information
MGE type: IScluster/Tn MGE length: 6364 bp
Accession: NZ_CP089927 Location: 2721795..2728158 Organism: Mycobacterium tuberculosis strain M20 Replicon: chromosome
Accession: NZ_CP089927 Location: 2721795..2728158 Organism: Mycobacterium tuberculosis strain M20 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LV451_RS12855 | 2716851..2717504 | + | 654 | WP_003417903.1 | HAD family phosphatase | - |
| LV451_RS12860 | 2717543..2719048 | - | 1506 | WP_003417905.1 | type B diterpene cyclase | - |
| LV451_RS12865 | 2719053..2719943 | - | 891 | WP_003417908.1 | diterpene synthase | - |
| LV451_RS20835 | 2719952..2721562 | - | 1611 | WP_003417910.1 | 1-deoxy-D-xylulose-5-phosphate synthase N-terminal domain-containing protein | - |
| LV451_RS20840 | 2721507..2721686 | - | 180 | WP_250575601.1 | 1-deoxy-D-xylulose-5-phosphate synthase N-terminal domain-containing protein | - |
| LV451_RS12885 | 2723143..2724132 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| LV451_RS12890 | 2724132..2725184 | - | 1053 | WP_009935184.1 | polyprenyl synthetase family protein | - |
| LV451_RS12895 | 2725938..2726330 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LV451_RS12900 | 2726330..2726605 | - | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LV451_RS12905 | 2726787..2728158 | + | 1372 | Protein_2549 | ISNCY family transposase ISRjo3 | Transposase |
| LV451_RS12910 | 2728348..2730458 | + | 2111 | Protein_2550 | PE family protein | - |
| LV451_RS12915 | 2730529..2731401 | - | 873 | WP_003417929.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| LV451_RS12920 | 2731475..2732185 | + | 711 | WP_003417932.1 | histidine phosphatase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0 |