MGE detailed information
MGE type: Prophage MGE length: 33674 bp
Accession: NZ_CP089919 Location: 892..34565 Organism: Rahnella victoriana strain JZ-GX1 Replicon: chromosome
Accession: NZ_CP089919 Location: 892..34565 Organism: Rahnella victoriana strain JZ-GX1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J9880_RS00010 (J9880_00010) | 346..516 | + | 171 | WP_232769924.1 | DUF2724 domain-containing protein | - |
| J9880_RS00015 (J9880_00015) | 524..826 | + | 303 | WP_232769897.1 | hypothetical protein | - |
| J9880_RS00020 (J9880_00020) | 892..1170 | + | 279 | WP_232769898.1 | DUF2732 family protein | - |
| J9880_RS00025 (J9880_00025) | 1173..1397 | + | 225 | WP_232769899.1 | TraR/DksA C4-type zinc finger protein | - |
| J9880_RS00030 (J9880_00030) | 1477..3708 | + | 2232 | WP_232769925.1 | replication endonuclease | - |
| J9880_RS00035 (J9880_00035) | 3669..4067 | + | 399 | WP_232769900.1 | hypothetical protein | - |
| J9880_RS00040 (J9880_00040) | 4274..4441 | + | 168 | WP_165385156.1 | hypothetical protein | - |
| J9880_RS00045 (J9880_00045) | 4993..5886 | + | 894 | WP_232769926.1 | ATP-dependent zinc metalloprotease FtsH | VF |
| J9880_RS00050 (J9880_00050) | 5879..7123 | + | 1245 | WP_232769927.1 | hypothetical protein | - |
| J9880_RS00055 (J9880_00055) | 7120..8226 | + | 1107 | WP_232769928.1 | S8 family serine peptidase | - |
| J9880_RS00060 (J9880_00060) | 8208..8495 | + | 288 | WP_232769929.1 | hypothetical protein | - |
| J9880_RS00065 (J9880_00065) | 8532..9545 | - | 1014 | WP_232769930.1 | phage portal protein | - |
| J9880_RS00070 (J9880_00070) | 9546..11309 | - | 1764 | WP_232769905.1 | terminase ATPase subunit family protein | - |
| J9880_RS25055 | 11306..11428 | - | 123 | WP_269812094.1 | hypothetical protein | - |
| J9880_RS00075 (J9880_00075) | 11452..12300 | + | 849 | WP_232769906.1 | GPO family capsid scaffolding protein | - |
| J9880_RS00080 (J9880_00080) | 12336..13475 | + | 1140 | WP_131694541.1 | phage major capsid protein, P2 family | - |
| J9880_RS00085 (J9880_00085) | 13479..14135 | + | 657 | WP_232769931.1 | terminase endonuclease subunit | - |
| J9880_RS00090 (J9880_00090) | 14231..14701 | + | 471 | WP_112168801.1 | head completion/stabilization protein | - |
| J9880_RS00095 (J9880_00095) | 14701..14904 | + | 204 | WP_113876574.1 | tail protein X | - |
| J9880_RS00100 (J9880_00100) | 14910..15119 | + | 210 | WP_131693619.1 | holin | - |
| J9880_RS00105 (J9880_00105) | 15100..15609 | + | 510 | WP_232769907.1 | lysozyme | - |
| J9880_RS00110 (J9880_00110) | 15609..16034 | + | 426 | WP_232769908.1 | Rz-like lysis system protein LysB | - |
| J9880_RS00115 (J9880_00115) | 15919..16167 | + | 249 | WP_232770501.1 | Rz1-like lysis system protein LysC | - |
| J9880_RS00120 (J9880_00120) | 16130..16597 | + | 468 | WP_232769909.1 | phage tail protein | - |
| J9880_RS00125 (J9880_00125) | 16590..17042 | + | 453 | WP_232769910.1 | phage virion morphogenesis protein | - |
| J9880_RS00130 (J9880_00130) | 17128..18072 | + | 945 | WP_232769932.1 | DUF4062 domain-containing protein | - |
| J9880_RS00135 (J9880_00135) | 18168..18809 | + | 642 | WP_232769933.1 | phage baseplate assembly protein V | - |
| J9880_RS00140 (J9880_00140) | 18806..19156 | + | 351 | WP_232769934.1 | GPW/gp25 family protein | - |
| J9880_RS00145 (J9880_00145) | 19160..20068 | + | 909 | WP_232769935.1 | baseplate assembly protein | - |
| J9880_RS00150 (J9880_00150) | 20061..20588 | + | 528 | WP_232769914.1 | phage tail protein I | - |
| J9880_RS00155 (J9880_00155) | 20598..22523 | + | 1926 | WP_232769936.1 | phage tail protein | - |
| J9880_RS00160 (J9880_00160) | 22526..22941 | + | 416 | Protein_32 | tail fiber assembly protein | - |
| J9880_RS00165 (J9880_00165) | 23084..24253 | + | 1170 | WP_232769937.1 | phage tail sheath protein | - |
| J9880_RS00170 (J9880_00170) | 24267..24776 | + | 510 | WP_232769938.1 | phage major tail tube protein | - |
| J9880_RS00175 (J9880_00175) | 24834..25115 | + | 282 | WP_232769918.1 | phage tail assembly protein | - |
| J9880_RS00180 (J9880_00180) | 25148..25270 | + | 123 | WP_112150974.1 | GpE family phage tail protein | - |
| J9880_RS00185 (J9880_00185) | 25263..27701 | + | 2439 | WP_232769939.1 | phage tail tape measure protein | - |
| J9880_RS00190 (J9880_00190) | 27714..28184 | + | 471 | WP_232769919.1 | phage tail protein | - |
| J9880_RS00195 (J9880_00195) | 28181..29335 | + | 1155 | WP_232769940.1 | phage late control D family protein | - |
| J9880_RS00200 (J9880_00200) | 29351..29752 | - | 402 | WP_232769920.1 | fosfomycin resistance glutathione transferase | - |
| J9880_RS00205 (J9880_00205) | 29892..30113 | + | 222 | WP_232770502.1 | DNA-binding transcriptional regulator | - |
| J9880_RS00210 (J9880_00210) | 30252..31307 | + | 1056 | WP_232769941.1 | Tyrosine recombinase XerH | VF |
| - | 31377..31466 | - | 90 | - | - | Toxin Detail |
| J9880_RS00215 (J9880_00215) | 31622..31957 | - | 336 | WP_095921404.1 | YebY family protein | - |
| J9880_RS00220 (J9880_00220) | 32008..32892 | - | 885 | WP_095921403.1 | copper homeostasis membrane protein CopD | - |
| J9880_RS00225 (J9880_00225) | 32896..33246 | - | 351 | WP_229921023.1 | copper homeostasis periplasmic binding protein CopC | - |
| J9880_RS00230 (J9880_00230) | 33421..33927 | - | 507 | WP_095921401.1 | non-heme ferritin | - |
| J9880_RS00235 (J9880_00235) | 34335..34565 | + | 231 | WP_013576177.1 | DNA polymerase III subunit theta | - |
| J9880_RS00240 (J9880_00240) | 34585..35541 | - | 957 | WP_095921400.1 | prolyl aminopeptidase | - |
| J9880_RS00245 (J9880_00245) | 36095..38134 | - | 2040 | WP_119826420.1 | prolyl oligopeptidase family serine peptidase | - |
| J9880_RS00250 (J9880_00250) | 38257..38622 | - | 366 | WP_119826422.1 | protein YebF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|