MGE detailed information
MGE type: Genomic_island MGE length: 54286 bp
Accession: NZ_CP089798 Location: 3598595..3652880 Organism: Salmonella enterica subsp. enterica serovar Kentucky strain ZTA19/00789 Replicon: chromosome
Accession: NZ_CP089798 Location: 3598595..3652880 Organism: Salmonella enterica subsp. enterica serovar Kentucky strain ZTA19/00789 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LUY14_RS17560 () | 3595098..3595865 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| LUY14_RS17565 () | 3596175..3596582 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| LUY14_RS17570 () | 3596913..3597632 | + | 720 | WP_000787603.1 | adhesin/invasin protein PagN | - |
| LUY14_RS17575 () | 3597636..3597824 | - | 189 | WP_031603649.1 | hypothetical protein | - |
| LUY14_RS17580 () | 3597860..3597993 | + | 134 | Protein_3440 | transposase | - |
| LUY14_RS17585 () | 3598595..3599212 | - | 618 | WP_000241747.1 | protein TioA | - |
| LUY14_RS17590 () | 3599352..3599807 | - | 456 | WP_000141547.1 | Lrp/AsnC family transcriptional regulator | - |
| LUY14_RS17595 () | 3599940..3601019 | - | 1080 | WP_000066479.1 | fimbrial protein TcfD | - |
| LUY14_RS17600 () | 3601042..3603729 | - | 2688 | WP_052939571.1 | fimbrial outer membrane usher protein TcfC | - |
| LUY14_RS17605 () | 3603838..3604356 | - | 519 | WP_232660199.1 | CS1 type fimbrial major subunit | - |
| LUY14_RS17610 () | 3604464..3605174 | - | 711 | WP_001009507.1 | fimbrial chaperone TcfA | - |
| LUY14_RS17615 () | 3606210..3606767 | + | 558 | Protein_3447 | ATP-binding protein | - |
| LUY14_RS17620 () | 3606807..3606993 | - | 187 | Protein_3448 | transposase | - |
| LUY14_RS17625 () | 3607074..3607193 | - | 120 | Protein_3449 | hypothetical protein | - |
| LUY14_RS17630 () | 3607313..3608260 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| LUY14_RS17635 () | 3608753..3608993 | - | 241 | Protein_3451 | PerC family transcriptional regulator | - |
| LUY14_RS17640 () | 3609076..3609897 | - | 822 | WP_000119391.1 | polysaccharide deacetylase family protein | - |
| LUY14_RS17645 () | 3610305..3610775 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| LUY14_RS17650 () | 3610797..3613307 | - | 2511 | WP_023223985.1 | fimbrial biogenesis outer membrane usher protein | - |
| LUY14_RS17655 () | 3613331..3614071 | - | 741 | WP_052939572.1 | pili assembly chaperone SafB | - |
| LUY14_RS17660 () | 3614146..3614643 | - | 498 | WP_058654878.1 | Saf-pilin pilus formation protein SafA | - |
| LUY14_RS17665 () | 3615404..3616108 | - | 705 | Protein_3457 | integrase core domain-containing protein | - |
| LUY14_RS17670 () | 3616161..3616397 | + | 237 | Protein_3458 | SymE family type I addiction module toxin | - |
| LUY14_RS17675 () | 3616542..3616820 | - | 279 | WP_012664366.1 | hypothetical protein | - |
| LUY14_RS17680 () | 3617138..3617605 | - | 468 | WP_000828182.1 | sugar tyrosine-protein kinase | - |
| LUY14_RS17685 () | 3617698..3617973 | - | 276 | WP_223163371.1 | hypothetical protein | - |
| - | 3618889..3619221 | - | 333 | - | - | Antitoxin Detail |
| LUY14_RS17690 () | 3619046..3619303 | + | 258 | WP_023203422.1 | SymE family type I addiction module toxin | Toxin Detail |
| LUY14_RS17695 () | 3619362..3619670 | - | 309 | WP_023203423.1 | hypothetical protein | - |
| LUY14_RS17700 () | 3619689..3620096 | - | 408 | WP_024146273.1 | DUF4329 domain-containing protein | - |
| LUY14_RS17705 () | 3620457..3620978 | - | 522 | WP_023203424.1 | SMI1/KNR4 family protein | - |
| LUY14_RS17710 () | 3620992..3625125 | - | 4134 | WP_072106084.1 | RHS repeat-associated core domain-containing protein | - |
| LUY14_RS17715 () | 3625144..3625590 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
| LUY14_RS17720 () | 3625614..3627803 | - | 2190 | WP_052939573.1 | type VI secretion system Vgr family protein | - |
| LUY14_RS17725 () | 3628200..3628721 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| LUY14_RS17730 () | 3628745..3629161 | - | 417 | WP_001596567.1 | DUF2195 family protein | - |
| LUY14_RS17735 () | 3629875..3630444 | + | 570 | WP_052939574.1 | DUF4291 domain-containing protein | - |
| LUY14_RS17740 () | 3630490..3631038 | - | 549 | WP_023236940.1 | hypothetical protein | - |
| LUY14_RS17745 () | 3631035..3635573 | - | 4539 | WP_223163370.1 | RHS repeat-associated core domain-containing protein | - |
| LUY14_RS17750 () | 3635604..3636035 | - | 432 | WP_001199685.1 | DcrB-related protein | - |
| LUY14_RS17755 () | 3636050..3638272 | - | 2223 | WP_052939575.1 | type VI secretion system Vgr family protein | - |
| LUY14_RS17760 () | 3638304..3638753 | - | 450 | WP_223152164.1 | hypothetical protein | - |
| LUY14_RS17765 () | 3638767..3639468 | - | 702 | WP_023181852.1 | hypothetical protein | - |
| LUY14_RS17770 () | 3639479..3639559 | - | 81 | Protein_3478 | hypothetical protein | - |
| LUY14_RS17775 () | 3639595..3640056 | - | 462 | WP_023240609.1 | hypothetical protein | - |
| LUY14_RS17780 () | 3640041..3640511 | - | 471 | WP_000501517.1 | glucosaminidase domain-containing protein | - |
| LUY14_RS17785 () | 3640554..3641321 | - | 768 | WP_001254120.1 | TagF domain-containing protein | - |
| LUY14_RS17790 () | 3641321..3645214 | - | 3894 | WP_058654875.1 | type VI secretion system membrane subunit TssM | - |
| LUY14_RS17795 () | 3645248..3645679 | - | 432 | WP_077905250.1 | Shiga toxin A subunit | - |
| LUY14_RS17800 () | 3645882..3646655 | - | 774 | WP_023224022.1 | Rap1a/Tai family immunity protein | - |
| LUY14_RS17805 () | 3646660..3647964 | - | 1305 | WP_023224021.1 | type VI secretion system protein TssL, long form | - |
| LUY14_RS17810 () | 3647961..3649304 | - | 1344 | WP_000118732.1 | type VI secretion system baseplate subunit TssK | - |
| LUY14_RS17815 () | 3649308..3649844 | - | 537 | WP_023202967.1 | type VI secretion system lipoprotein TssJ | - |
| LUY14_RS17820 () | 3649911..3650395 | - | 485 | Protein_3488 | Hcp family type VI secretion system effector | - |
| LUY14_RS17825 () | 3650538..3650921 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| LUY14_RS17830 () | 3650906..3651391 | - | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| LUY14_RS17835 () | 3651434..3651628 | - | 195 | Protein_3491 | type VI secretion system lipoprotein TssJ | - |
| LUY14_RS17840 () | 3651695..3652180 | - | 486 | WP_000312802.1 | Hcp family type VI secretion system effector | - |
| LUY14_RS17845 () | 3652434..3652766 | - | 333 | WP_077944511.1 | hypothetical protein | - |
| LUY14_RS17850 () | 3652893..3653003 | - | 111 | WP_077684072.1 | BPSL0067 family protein | - |
| LUY14_RS17855 () | 3653066..3654574 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| LUY14_RS17860 () | 3654598..3655140 | - | 543 | WP_000996818.1 | type VI secretion system contractile sheath small subunit | - |
| LUY14_RS17865 () | 3655241..3657880 | - | 2640 | WP_023223892.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|