MGE detailed information
MGE type: Genomic_island MGE length: 55965 bp
Accession: NZ_CP089790 Location: 3595781..3651745 Organism: Salmonella enterica subsp. enterica serovar Kentucky strain ZTA19/00830 Replicon: chromosome
Accession: NZ_CP089790 Location: 3595781..3651745 Organism: Salmonella enterica subsp. enterica serovar Kentucky strain ZTA19/00830 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LUY12_RS17535 () | 3591413..3593857 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| LUY12_RS17540 () | 3593966..3594733 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| LUY12_RS17545 () | 3595043..3595450 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| LUY12_RS17550 () | 3595781..3596500 | + | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| LUY12_RS17555 () | 3596504..3596692 | - | 189 | WP_031603649.1 | hypothetical protein | - |
| LUY12_RS17560 () | 3596728..3596861 | + | 134 | Protein_3439 | transposase | - |
| LUY12_RS17565 () | 3597463..3598080 | - | 618 | WP_000241747.1 | protein TioA | - |
| LUY12_RS17570 () | 3598220..3598675 | - | 456 | WP_000141547.1 | Lrp/AsnC family transcriptional regulator | - |
| LUY12_RS17575 () | 3598808..3599887 | - | 1080 | WP_000066479.1 | fimbrial protein TcfD | - |
| LUY12_RS17580 () | 3599910..3602597 | - | 2688 | WP_052939571.1 | hypothetical protein | VF |
| LUY12_RS17585 () | 3602706..3603224 | - | 519 | WP_232660199.1 | CFA/I fimbrial subunit B | VF |
| LUY12_RS17590 () | 3603332..3604042 | - | 711 | WP_001009507.1 | hypothetical protein | VF |
| LUY12_RS17595 () | 3605075..3605632 | + | 558 | Protein_3446 | IS21 family transposase ISEc62 | Transposase |
| LUY12_RS17600 () | 3605672..3605858 | - | 187 | Protein_3447 | transposase | - |
| LUY12_RS17605 () | 3605939..3606058 | - | 120 | Protein_3448 | hypothetical protein | - |
| LUY12_RS17610 () | 3606178..3607125 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| LUY12_RS17615 () | 3607618..3607858 | - | 241 | Protein_3450 | PerC family transcriptional regulator | - |
| LUY12_RS17620 () | 3607941..3608762 | - | 822 | WP_000119391.1 | polysaccharide deacetylase family protein | - |
| LUY12_RS17625 () | 3609170..3609640 | - | 471 | WP_000266939.1 | AfaD family invasin | - |
| LUY12_RS17630 () | 3609662..3612172 | - | 2511 | WP_023223985.1 | F1 capsule-anchoring protein | VF |
| LUY12_RS17635 () | 3612196..3612936 | - | 741 | WP_052939572.1 | Chaperone protein caf1M | VF |
| LUY12_RS17640 () | 3613011..3613508 | - | 498 | WP_058654878.1 | Saf-pilin pilus formation protein SafA | - |
| LUY12_RS17645 () | 3614269..3614973 | - | 705 | Protein_3456 | integrase core domain-containing protein | - |
| LUY12_RS17650 () | 3615026..3615262 | + | 237 | Protein_3457 | SymE family type I addiction module toxin | - |
| LUY12_RS17655 () | 3615407..3615685 | - | 279 | WP_012664366.1 | hypothetical protein | - |
| LUY12_RS17660 () | 3616003..3616470 | - | 468 | WP_000828182.1 | sugar tyrosine-protein kinase | - |
| LUY12_RS17665 () | 3616563..3616838 | - | 276 | WP_223163371.1 | hypothetical protein | - |
| - | 3617754..3618086 | - | 333 | - | - | Antitoxin Detail |
| LUY12_RS17670 () | 3617911..3618168 | + | 258 | WP_023203422.1 | SymE family type I addiction module toxin | Toxin Detail |
| LUY12_RS17675 () | 3618227..3618535 | - | 309 | WP_023203423.1 | hypothetical protein | - |
| LUY12_RS17680 () | 3618554..3618961 | - | 408 | WP_024146273.1 | DUF4329 domain-containing protein | - |
| LUY12_RS17685 () | 3619322..3619843 | - | 522 | WP_023203424.1 | SMI1/KNR4 family protein | - |
| LUY12_RS17690 () | 3619857..3623990 | - | 4134 | WP_072106084.1 | RHS repeat-associated core domain-containing protein | - |
| LUY12_RS17695 () | 3624009..3624455 | - | 447 | WP_000375832.1 | DcrB-related protein | - |
| LUY12_RS17700 () | 3624479..3626668 | - | 2190 | WP_052939573.1 | Actin cross-linking toxin VgrG1 | VF |
| LUY12_RS17705 () | 3627065..3627586 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| LUY12_RS17710 () | 3627610..3628026 | - | 417 | WP_001596567.1 | DUF2195 family protein | - |
| LUY12_RS17715 () | 3628740..3629309 | + | 570 | WP_052939574.1 | DUF4291 domain-containing protein | - |
| LUY12_RS17720 () | 3629355..3629903 | - | 549 | WP_023236940.1 | hypothetical protein | - |
| LUY12_RS17725 () | 3629900..3634438 | - | 4539 | WP_223163370.1 | RHS repeat-associated core domain-containing protein | - |
| LUY12_RS17730 () | 3634469..3634900 | - | 432 | WP_001199685.1 | DcrB-related protein | - |
| LUY12_RS17735 () | 3634915..3637137 | - | 2223 | WP_052939575.1 | Actin cross-linking toxin VgrG1 | VF |
| LUY12_RS17740 () | 3637169..3637618 | - | 450 | WP_223152164.1 | hypothetical protein | - |
| LUY12_RS17745 () | 3637632..3638333 | - | 702 | WP_023181852.1 | hypothetical protein | - |
| LUY12_RS17750 () | 3638344..3638424 | - | 81 | Protein_3477 | hypothetical protein | - |
| LUY12_RS17755 () | 3638460..3638921 | - | 462 | WP_023240609.1 | hypothetical protein | - |
| LUY12_RS17760 () | 3638906..3639376 | - | 471 | WP_000501517.1 | glucosaminidase domain-containing protein | - |
| LUY12_RS17765 () | 3639419..3640186 | - | 768 | WP_001254120.1 | TagF domain-containing protein | - |
| LUY12_RS17770 () | 3640186..3644079 | - | 3894 | WP_058654875.1 | hypothetical protein | VF |
| LUY12_RS17775 () | 3644113..3644544 | - | 432 | WP_077905250.1 | Shiga toxin A subunit | - |
| LUY12_RS17780 () | 3644747..3645520 | - | 774 | WP_023224022.1 | Rap1a/Tai family immunity protein | - |
| LUY12_RS17785 () | 3645525..3646829 | - | 1305 | WP_023224021.1 | Outer membrane porin F | VF |
| LUY12_RS17790 () | 3646826..3648169 | - | 1344 | WP_000118732.1 | hypothetical protein | VF |
| LUY12_RS17795 () | 3648173..3648709 | - | 537 | WP_023202967.1 | hypothetical protein | VF |
| LUY12_RS17800 () | 3648776..3649260 | - | 485 | Protein_3487 | Protein hcp1 | VF |
| LUY12_RS17805 () | 3649403..3649786 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| LUY12_RS17810 () | 3649771..3650256 | - | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| LUY12_RS17815 () | 3650299..3650493 | - | 195 | Protein_3490 | type VI secretion system lipoprotein TssJ | - |
| LUY12_RS17820 () | 3650560..3651045 | - | 486 | WP_000312802.1 | Protein hcp1 | VF |
| LUY12_RS17825 () | 3651299..3651631 | - | 333 | WP_077944511.1 | hypothetical protein | - |
| LUY12_RS17830 () | 3651758..3651868 | - | 111 | WP_077684072.1 | BPSL0067 family protein | - |
| LUY12_RS17835 () | 3651931..3653439 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| LUY12_RS17840 () | 3653463..3654005 | - | 543 | WP_000996818.1 | type VI secretion system contractile sheath small subunit | - |
| LUY12_RS17845 () | 3654106..3656745 | - | 2640 | WP_023223892.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|