MGE detailed information
MGE type: Genomic_island MGE length: 55217 bp
Accession: NZ_CP089788 Location: 1235222..1290438 Organism: Salmonella enterica subsp. enterica serovar Kentucky strain ZTA19/00847 Replicon: chromosome
Accession: NZ_CP089788 Location: 1235222..1290438 Organism: Salmonella enterica subsp. enterica serovar Kentucky strain ZTA19/00847 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LUY19_RS05745 () | 1231473..1232015 | + | 543 | WP_000996818.1 | type VI secretion system contractile sheath small subunit | - |
| LUY19_RS05750 () | 1232039..1233547 | + | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| LUY19_RS05755 () | 1233610..1233720 | + | 111 | WP_077684072.1 | BPSL0067 family protein | - |
| LUY19_RS05760 () | 1233847..1234179 | + | 333 | WP_077944511.1 | hypothetical protein | - |
| LUY19_RS05765 () | 1234433..1234918 | + | 486 | WP_000312802.1 | Hcp family type VI secretion system effector | - |
| LUY19_RS05770 () | 1234985..1235179 | + | 195 | Protein_1109 | type VI secretion system lipoprotein TssJ | - |
| LUY19_RS05775 () | 1235222..1235707 | + | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| LUY19_RS05780 () | 1235692..1236075 | + | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| LUY19_RS05785 () | 1236218..1236702 | + | 485 | Protein_1112 | Protein hcp1 | VF |
| LUY19_RS05790 () | 1236769..1237305 | + | 537 | WP_023202967.1 | hypothetical protein | VF |
| LUY19_RS05795 () | 1237309..1238652 | + | 1344 | WP_000118732.1 | hypothetical protein | VF |
| LUY19_RS05800 () | 1238649..1239953 | + | 1305 | WP_023224021.1 | Outer membrane porin F | VF |
| LUY19_RS05805 () | 1239958..1240731 | + | 774 | WP_023224022.1 | Rap1a/Tai family immunity protein | - |
| LUY19_RS05810 () | 1240934..1241365 | + | 432 | WP_077905250.1 | Shiga toxin A subunit | - |
| LUY19_RS05815 () | 1241399..1245292 | + | 3894 | WP_058654875.1 | hypothetical protein | VF |
| LUY19_RS05820 () | 1245292..1246059 | + | 768 | WP_001254120.1 | TagF domain-containing protein | - |
| LUY19_RS05825 () | 1246102..1246572 | + | 471 | WP_000501517.1 | glucosaminidase domain-containing protein | - |
| LUY19_RS05830 () | 1246557..1247018 | + | 462 | WP_023240609.1 | hypothetical protein | - |
| LUY19_RS05835 () | 1247054..1247134 | + | 81 | Protein_1122 | hypothetical protein | - |
| LUY19_RS05840 () | 1247145..1247846 | + | 702 | WP_023181852.1 | hypothetical protein | - |
| LUY19_RS05845 () | 1247860..1248309 | + | 450 | WP_223152164.1 | hypothetical protein | - |
| LUY19_RS05850 () | 1248341..1250563 | + | 2223 | WP_052939575.1 | Actin cross-linking toxin VgrG1 | VF |
| LUY19_RS05855 () | 1250578..1251009 | + | 432 | WP_001199685.1 | DcrB-related protein | - |
| LUY19_RS05860 () | 1251040..1255578 | + | 4539 | WP_223163370.1 | RHS repeat-associated core domain-containing protein | - |
| LUY19_RS05865 () | 1255575..1256123 | + | 549 | WP_023236940.1 | hypothetical protein | - |
| LUY19_RS05870 () | 1256169..1256738 | - | 570 | WP_052939574.1 | DUF4291 domain-containing protein | - |
| LUY19_RS05875 () | 1257452..1257868 | + | 417 | WP_001596567.1 | DUF2195 family protein | - |
| LUY19_RS05880 () | 1257892..1258413 | + | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| LUY19_RS05885 () | 1258810..1260999 | + | 2190 | WP_052939573.1 | Actin cross-linking toxin VgrG1 | VF |
| LUY19_RS05890 () | 1261023..1261469 | + | 447 | WP_000375832.1 | DcrB-related protein | - |
| LUY19_RS05895 () | 1261488..1265621 | + | 4134 | WP_072106084.1 | RHS repeat-associated core domain-containing protein | - |
| LUY19_RS05900 () | 1265635..1266156 | + | 522 | WP_023203424.1 | SMI1/KNR4 family protein | - |
| LUY19_RS05905 () | 1266517..1266924 | + | 408 | WP_024146273.1 | DUF4329 domain-containing protein | - |
| LUY19_RS05910 () | 1266943..1267251 | + | 309 | WP_023203423.1 | hypothetical protein | - |
| LUY19_RS05915 () | 1267310..1267567 | - | 258 | WP_023203422.1 | SymE family type I addiction module toxin | Toxin Detail |
| - | 1267392..1267724 | + | 333 | - | - | Antitoxin Detail |
| LUY19_RS05920 () | 1268640..1268915 | + | 276 | WP_223163371.1 | hypothetical protein | - |
| LUY19_RS05925 () | 1269008..1269475 | + | 468 | WP_000828182.1 | sugar tyrosine-protein kinase | - |
| LUY19_RS05930 () | 1269793..1270071 | + | 279 | WP_012664366.1 | hypothetical protein | - |
| LUY19_RS05935 () | 1270216..1270452 | - | 237 | Protein_1142 | SymE family type I addiction module toxin | - |
| LUY19_RS05940 () | 1270505..1271209 | + | 705 | Protein_1143 | integrase core domain-containing protein | - |
| LUY19_RS05945 () | 1271970..1272467 | + | 498 | WP_058654878.1 | Saf-pilin pilus formation protein SafA | - |
| LUY19_RS05950 () | 1272542..1273282 | + | 741 | WP_052939572.1 | Chaperone protein caf1M | VF |
| LUY19_RS05955 () | 1273306..1275816 | + | 2511 | WP_023223985.1 | F1 capsule-anchoring protein | VF |
| LUY19_RS05960 () | 1275838..1276308 | + | 471 | WP_000266939.1 | AfaD family invasin | - |
| LUY19_RS05965 () | 1276716..1277537 | + | 822 | WP_000119391.1 | polysaccharide deacetylase family protein | - |
| LUY19_RS05970 () | 1277620..1277860 | + | 241 | Protein_1149 | PerC family transcriptional regulator | - |
| LUY19_RS05975 () | 1278353..1279300 | + | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| LUY19_RS05980 () | 1279420..1279539 | + | 120 | Protein_1151 | hypothetical protein | - |
| LUY19_RS05985 () | 1279620..1279806 | + | 187 | Protein_1152 | transposase | - |
| LUY19_RS05990 () | 1279846..1280403 | - | 558 | Protein_1153 | IS21 family transposase ISEc62 | Transposase |
| LUY19_RS05995 () | 1281439..1282149 | + | 711 | WP_001009507.1 | hypothetical protein | VF |
| LUY19_RS06000 () | 1282257..1282775 | + | 519 | WP_232660199.1 | CFA/I fimbrial subunit B | VF |
| LUY19_RS06005 () | 1282884..1285571 | + | 2688 | WP_052939571.1 | hypothetical protein | VF |
| LUY19_RS06010 () | 1285594..1286673 | + | 1080 | WP_000066479.1 | fimbrial protein TcfD | - |
| LUY19_RS06015 () | 1286806..1287261 | + | 456 | WP_000141547.1 | Lrp/AsnC family transcriptional regulator | - |
| LUY19_RS06020 () | 1287401..1288018 | + | 618 | WP_000241747.1 | protein TioA | - |
| LUY19_RS06025 () | 1288620..1288753 | - | 134 | Protein_1160 | transposase | - |
| LUY19_RS06030 () | 1288789..1288977 | + | 189 | WP_031603649.1 | hypothetical protein | - |
| LUY19_RS06035 () | 1288981..1289700 | - | 720 | WP_000787603.1 | Outer membrane protein PagN | VF |
| LUY19_RS06040 () | 1290031..1290438 | - | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| LUY19_RS06045 () | 1290748..1291515 | - | 768 | WP_000015789.1 | amidohydrolase | - |
| LUY19_RS06050 () | 1291624..1294068 | - | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| LUY19_RS06055 () | 1294308..1294886 | + | 579 | WP_000284051.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|