MGE detailed information
MGE type: IScluster/Tn MGE length: 11755 bp
Accession: NZ_CP089781 Location: 1156227..1167981 Organism: Mycobacterium tuberculosis strain 02-R1179 Replicon: chromosome
Accession: NZ_CP089781 Location: 1156227..1167981 Organism: Mycobacterium tuberculosis strain 02-R1179 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVJ76_RS05505 (LVJ76_05510) | 1153162..1153731 | + | 570 | WP_003405322.1 | K(+)-transporting ATPase subunit C | - |
| LVJ76_RS05510 (LVJ76_05515) | 1153735..1155264 | - | 1530 | WP_003405324.1 | HAMP domain-containing sensor histidine kinase | - |
| LVJ76_RS05515 (LVJ76_05520) | 1155272..1156045 | - | 774 | WP_003405328.1 | two-component system response regulator TrcR | - |
| LVJ76_RS05520 (LVJ76_05525) | 1156227..1157667 | - | 1441 | Protein_1087 | ISNCY family transposase | - |
| LVJ76_RS05525 (LVJ76_05530) | 1157853..1158137 | - | 285 | WP_003898699.1 | hypothetical protein | VF |
| LVJ76_RS05530 (LVJ76_05535) | 1158164..1158460 | - | 297 | WP_003405345.1 | type VII secretion system ESX-5 protein EsxJ | - |
| LVJ76_RS05535 (LVJ76_05540) | 1158606..1159781 | - | 1176 | WP_009938304.1 | hypothetical protein | VF |
| LVJ76_RS05540 (LVJ76_05545) | 1159858..1160685 | - | 828 | WP_003405370.1 | PE domain-containing protein | - |
| LVJ76_RS05545 (LVJ76_05550) | 1161473..1161712 | - | 240 | WP_009936438.1 | hypothetical protein | - |
| LVJ76_RS05550 (LVJ76_05555) | 1161881..1162808 | - | 928 | Protein_1093 | IS5-like element ISMt1 family transposase | - |
| LVJ76_RS05555 (LVJ76_05560) | 1163091..1164116 | - | 1026 | WP_003405514.1 | serine protease | - |
| LVJ76_RS05560 (LVJ76_05565) | 1164363..1164986 | + | 624 | WP_003405517.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| LVJ76_RS05565 (LVJ76_05570) | 1164983..1165864 | + | 882 | WP_003898703.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| LVJ76_RS05570 (LVJ76_05575) | 1166734..1167981 | + | 1248 | WP_003900260.1 | IS256 family transposase IS1081 | Transposase |
| LVJ76_RS05575 (LVJ76_05580) | 1168349..1169464 | - | 1116 | WP_003405582.1 | hypothetical protein | - |
| LVJ76_RS05580 (LVJ76_05585) | 1169421..1169624 | - | 204 | WP_003405585.1 | hypothetical protein | - |
| LVJ76_RS05585 (LVJ76_05590) | 1169697..1170143 | + | 447 | WP_003405595.1 | oxidation-sensing regulator MosR | - |
| LVJ76_RS05590 (LVJ76_05595) | 1170192..1171097 | + | 906 | WP_003405600.1 | SDR family oxidoreductase | - |
| LVJ76_RS05595 (LVJ76_05600) | 1171256..1171435 | - | 180 | WP_023637525.1 | helix-turn-helix domain-containing protein | - |
| LVJ76_RS05600 (LVJ76_05605) | 1171616..1172065 | - | 450 | Protein_1103 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA10016 | NC_000962 | 1158918..1170670 | 0.001 |