MGE detailed information
MGE type: Prophage MGE length: 45912 bp
Accession: NZ_CP089778 Location: 1023960..1069871 Organism: Mycobacterium tuberculosis strain I0003758-5 Replicon: chromosome
Accession: NZ_CP089778 Location: 1023960..1069871 Organism: Mycobacterium tuberculosis strain I0003758-5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVJ73_RS04845 (LVJ73_04840) | 1020153..1021424 | - | 1272 | WP_070889687.1 | PPE family protein | - |
| LVJ73_RS04850 (LVJ73_04845) | 1021439..1021738 | - | 300 | WP_003404748.1 | PE family protein | - |
| LVJ73_RS04855 (LVJ73_04850) | 1022182..1023963 | + | 1782 | WP_003404749.1 | BCCT family transporter | - |
| LVJ73_RS04860 (LVJ73_04855) | 1023963..1024217 | + | 255 | WP_003898646.1 | hypothetical protein | - |
| LVJ73_RS04865 (LVJ73_04860) | 1024306..1024782 | + | 477 | WP_053869509.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LVJ73_RS04870 (LVJ73_04865) | 1024779..1025279 | + | 501 | WP_003404756.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LVJ73_RS04880 (LVJ73_04875) | 1025592..1026911 | - | 1320 | WP_003404757.1 | IS256-like element IS1554 family transposase | - |
| LVJ73_RS04885 (LVJ73_04880) | 1027199..1027780 | + | 582 | WP_003404760.1 | IS607-like element IS1535 family transposase | - |
| LVJ73_RS04890 (LVJ73_04885) | 1027780..1029432 | + | 1653 | WP_003404761.1 | IS607 family element RNA-guided endonuclease TnpB | - |
| LVJ73_RS04895 (LVJ73_04890) | 1029608..1030672 | - | 1065 | WP_003898648.1 | poly-gamma-glutamate hydrolase family protein | - |
| LVJ73_RS04900 (LVJ73_04895) | 1030673..1031959 | - | 1287 | WP_003898649.1 | Nramp family divalent metal transporter | - |
| LVJ73_RS04905 (LVJ73_04900) | 1031991..1032728 | - | 738 | WP_003404764.1 | flavodoxin family protein | - |
| LVJ73_RS04910 (LVJ73_04905) | 1032805..1033881 | - | 1077 | WP_003404767.1 | hypothetical protein | - |
| LVJ73_RS04915 (LVJ73_04910) | 1033935..1034726 | - | 792 | WP_003404769.1 | SDR family oxidoreductase | - |
| LVJ73_RS04920 (LVJ73_04915) | 1034998..1036110 | + | 1113 | WP_003404775.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| LVJ73_RS04925 (LVJ73_04920) | 1036123..1037097 | + | 975 | WP_003404779.1 | phosphate ABC transporter permease subunit PstC | - |
| LVJ73_RS04930 (LVJ73_04925) | 1037094..1038008 | + | 915 | WP_003898651.1 | phosphate ABC transporter permease PstA | - |
| LVJ73_RS04935 (LVJ73_04930) | 1038015..1040009 | - | 1995 | Protein_972 | serine/threonine protein kinase PknD | - |
| LVJ73_RS04940 (LVJ73_04935) | 1040031..1041143 | - | 1113 | WP_003898652.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| LVJ73_RS04945 (LVJ73_04940) | 1041359..1042189 | + | 831 | WP_003898653.1 | phosphate ABC transporter ATP-binding protein | - |
| LVJ73_RS04950 (LVJ73_04945) | 1042210..1043334 | + | 1125 | WP_003900236.1 | phosphate ABC transporter substrate-binding protein PstS | - |
| LVJ73_RS04955 (LVJ73_04950) | 1043394..1044410 | + | 1017 | WP_003404792.1 | phosphate ABC transporter permease subunit PstC | - |
| LVJ73_RS04960 (LVJ73_04955) | 1044412..1045317 | + | 906 | WP_003404794.1 | phosphate ABC transporter permease PstA | - |
| LVJ73_RS04965 (LVJ73_04960) | 1045294..1046115 | - | 822 | WP_003404795.1 | Ku protein | - |
| LVJ73_RS04970 (LVJ73_04965) | 1046231..1048510 | + | 2280 | WP_003898655.1 | ATP-dependent DNA ligase | - |
| LVJ73_RS04975 (LVJ73_04970) | 1048507..1050441 | + | 1935 | WP_003404801.1 | fumarylacetoacetate hydrolase family protein | - |
| LVJ73_RS04980 (LVJ73_04975) | 1050688..1051554 | - | 867 | WP_003404819.1 | TIGR03619 family F420-dependent LLM class oxidoreductase | - |
| LVJ73_RS04985 (LVJ73_04980) | 1051639..1052412 | - | 774 | WP_003404823.1 | STAS domain-containing protein | - |
| LVJ73_RS04990 (LVJ73_04985) | 1052455..1052733 | + | 279 | WP_003901948.1 | hypothetical protein | - |
| LVJ73_RS04995 (LVJ73_04990) | 1052791..1053831 | - | 1041 | WP_003898656.1 | DUF4873 domain-containing protein | - |
| LVJ73_RS05000 (LVJ73_04995) | 1053860..1054336 | + | 477 | WP_003404828.1 | zinc finger domain-containing protein | - |
| LVJ73_RS05005 (LVJ73_05000) | 1054354..1055103 | + | 750 | WP_003911341.1 | SDR family oxidoreductase | - |
| LVJ73_RS05010 (LVJ73_05005) | 1055119..1056780 | - | 1662 | WP_003404830.1 | glucose-6-phosphate isomerase | - |
| LVJ73_RS05015 (LVJ73_05010) | 1057395..1057625 | - | 231 | WP_003404833.1 | mycolyltransferase | - |
| LVJ73_RS05020 (LVJ73_05015) | 1057542..1057736 | + | 195 | WP_003404835.1 | hypothetical protein | - |
| LVJ73_RS05025 (LVJ73_05020) | 1057741..1058058 | - | 318 | WP_003404838.1 | chorismate mutase | - |
| LVJ73_RS05030 (LVJ73_05025) | 1058355..1060670 | + | 2316 | WP_003404859.1 | DNA helicase PcrA | - |
| LVJ73_RS05035 (LVJ73_05030) | 1060751..1061749 | - | 999 | WP_003404862.1 | M23 family metallopeptidase | - |
| LVJ73_RS05040 (LVJ73_05035) | 1062059..1063222 | + | 1164 | WP_003898659.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| LVJ73_RS05045 (LVJ73_05040) | 1063244..1064146 | + | 903 | WP_009935735.1 | succinate--CoA ligase subunit alpha | - |
| LVJ73_RS05050 (LVJ73_05045) | 1064209..1065057 | - | 849 | WP_003404873.1 | LLM class F420-dependent oxidoreductase | - |
| LVJ73_RS05055 (LVJ73_05050) | 1065222..1066133 | + | 912 | WP_003404875.1 | DUF5336 domain-containing protein | - |
| LVJ73_RS05060 (LVJ73_05055) | 1066173..1067540 | + | 1368 | WP_003901049.1 | DUF6350 family protein | - |
| LVJ73_RS05065 (LVJ73_05060) | 1067656..1068303 | + | 648 | WP_003898661.1 | phosphoribosylglycinamide formyltransferase | - |
| LVJ73_RS05070 (LVJ73_05065) | 1068300..1069871 | + | 1572 | WP_003404890.1 | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | - |
| LVJ73_RS05075 (LVJ73_05070) | 1069978..1071357 | + | 1380 | WP_003404892.1 | ATP-binding protein | - |
| LVJ73_RS05080 (LVJ73_05075) | 1071350..1073368 | + | 2019 | WP_003404895.1 | VWA domain-containing protein | - |
| LVJ73_RS05085 (LVJ73_05080) | 1073422..1073643 | + | 222 | WP_003404898.1 | antitoxin VapB9 | - |
| LVJ73_RS05090 (LVJ73_05085) | 1073640..1074023 | + | 384 | WP_003404903.1 | PIN domain-containing protein | - |
| LVJ73_RS05095 (LVJ73_05090) | 1074169..1074516 | + | 348 | WP_003404907.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|