MGE detailed information
MGE type: IScluster/Tn MGE length: 11755 bp
Accession: NZ_CP089777 Location: 1164119..1175873 Organism: Mycobacterium tuberculosis strain I0003270-1 Replicon: chromosome
Accession: NZ_CP089777 Location: 1164119..1175873 Organism: Mycobacterium tuberculosis strain I0003270-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVJ72_RS05535 (LVJ72_05530) | 1161054..1161623 | + | 570 | WP_003405322.1 | K(+)-transporting ATPase subunit C | - |
| LVJ72_RS05540 (LVJ72_05535) | 1161627..1163156 | - | 1530 | WP_003405324.1 | HAMP domain-containing sensor histidine kinase | - |
| LVJ72_RS05545 (LVJ72_05540) | 1163164..1163937 | - | 774 | WP_003405328.1 | two-component system response regulator TrcR | - |
| LVJ72_RS05550 (LVJ72_05545) | 1164119..1165559 | - | 1441 | Protein_1093 | ISNCY family transposase | - |
| LVJ72_RS05555 (LVJ72_05550) | 1165745..1166029 | - | 285 | WP_003898699.1 | ESAT-6-like protein EsxI | VF |
| LVJ72_RS05560 (LVJ72_05555) | 1166056..1166352 | - | 297 | WP_003405345.1 | type VII secretion system ESX-5 protein EsxJ | - |
| LVJ72_RS05565 (LVJ72_05560) | 1166498..1167673 | - | 1176 | WP_003405368.1 | PPE family protein PPE15 | VF |
| LVJ72_RS05570 (LVJ72_05565) | 1167750..1168577 | - | 828 | WP_003405370.1 | PE domain-containing protein | - |
| LVJ72_RS05575 (LVJ72_05570) | 1169365..1169604 | - | 240 | WP_009936438.1 | hypothetical protein | - |
| LVJ72_RS05580 (LVJ72_05575) | 1169773..1170700 | - | 928 | Protein_1099 | IS5-like element ISMt1 family transposase | - |
| LVJ72_RS05585 (LVJ72_05580) | 1170983..1172008 | - | 1026 | WP_003405514.1 | serine protease | - |
| LVJ72_RS05590 (LVJ72_05585) | 1172255..1172878 | + | 624 | WP_003405517.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| LVJ72_RS05595 (LVJ72_05590) | 1172875..1173756 | + | 882 | WP_003898703.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| LVJ72_RS05600 (LVJ72_05595) | 1174626..1175873 | + | 1248 | WP_003901078.1 | IS256 family transposase IS1081 | Transposase |
| LVJ72_RS05605 (LVJ72_05600) | 1176241..1177356 | - | 1116 | WP_003405582.1 | hypothetical protein | - |
| LVJ72_RS05610 (LVJ72_05605) | 1177313..1177516 | - | 204 | WP_003405585.1 | hypothetical protein | - |
| LVJ72_RS05615 (LVJ72_05610) | 1177589..1178035 | + | 447 | WP_003405595.1 | oxidation-sensing regulator MosR | - |
| LVJ72_RS05620 (LVJ72_05615) | 1178084..1178989 | + | 906 | WP_003405600.1 | SDR family oxidoreductase | - |
| LVJ72_RS05625 (LVJ72_05620) | 1179148..1179327 | - | 180 | WP_023637525.1 | helix-turn-helix domain-containing protein | - |
| LVJ72_RS05630 (LVJ72_05625) | 1179508..1179957 | - | 450 | Protein_1109 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA10016 | NC_000962 | 1158918..1170670 | 0.001 |