MGE detailed information
MGE type: IScluster/Tn MGE length: 11755 bp
Accession: NZ_CP089776 Location: 1166879..1178633 Organism: Mycobacterium tuberculosis strain 02-R1896 Replicon: chromosome
Accession: NZ_CP089776 Location: 1166879..1178633 Organism: Mycobacterium tuberculosis strain 02-R1896 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVJ71_RS05550 (LVJ71_05545) | 1163814..1164383 | + | 570 | WP_003405322.1 | K(+)-transporting ATPase subunit C | - |
| LVJ71_RS05555 (LVJ71_05550) | 1164387..1165916 | - | 1530 | WP_003405324.1 | HAMP domain-containing sensor histidine kinase | - |
| LVJ71_RS05560 (LVJ71_05555) | 1165924..1166697 | - | 774 | WP_003405328.1 | two-component system response regulator TrcR | - |
| LVJ71_RS05565 (LVJ71_05560) | 1166879..1168319 | - | 1441 | Protein_1096 | ISNCY family transposase | - |
| LVJ71_RS05570 (LVJ71_05565) | 1168505..1168789 | - | 285 | WP_003898699.1 | hypothetical protein | VF |
| LVJ71_RS05575 (LVJ71_05570) | 1168816..1169112 | - | 297 | WP_003405345.1 | type VII secretion system ESX-5 protein EsxJ | - |
| LVJ71_RS05580 (LVJ71_05575) | 1169258..1170433 | - | 1176 | WP_003405368.1 | Putative HMP/thiamine import ATP-binding protein YkoD | VF |
| LVJ71_RS05585 (LVJ71_05580) | 1170510..1171337 | - | 828 | WP_003405370.1 | PE domain-containing protein | - |
| LVJ71_RS05590 (LVJ71_05585) | 1172125..1172364 | - | 240 | WP_009936438.1 | hypothetical protein | - |
| LVJ71_RS05595 (LVJ71_05590) | 1172533..1173460 | - | 928 | Protein_1102 | IS5-like element ISMt1 family transposase | - |
| LVJ71_RS05600 (LVJ71_05595) | 1173743..1174768 | - | 1026 | WP_003405514.1 | serine protease | - |
| LVJ71_RS05605 (LVJ71_05600) | 1175015..1175638 | + | 624 | WP_003405517.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| LVJ71_RS05610 (LVJ71_05605) | 1175635..1176516 | + | 882 | WP_003898703.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| LVJ71_RS05615 (LVJ71_05610) | 1177386..1178633 | + | 1248 | WP_003901078.1 | IS256 family transposase IS1081 | Transposase |
| LVJ71_RS05620 (LVJ71_05615) | 1179001..1180116 | - | 1116 | WP_003405582.1 | hypothetical protein | - |
| LVJ71_RS05625 (LVJ71_05620) | 1180073..1180276 | - | 204 | WP_003405585.1 | hypothetical protein | - |
| LVJ71_RS05630 (LVJ71_05625) | 1180349..1180795 | + | 447 | WP_003405595.1 | oxidation-sensing regulator MosR | - |
| LVJ71_RS05635 (LVJ71_05630) | 1180844..1181749 | + | 906 | WP_003405600.1 | SDR family oxidoreductase | - |
| LVJ71_RS05640 (LVJ71_05635) | 1181908..1182087 | - | 180 | WP_023637525.1 | helix-turn-helix domain-containing protein | - |
| LVJ71_RS05645 (LVJ71_05640) | 1182268..1182717 | - | 450 | Protein_1112 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA10016 | NC_000962 | 1158918..1170670 | 0 |