MGE detailed information
MGE type: IScluster/Tn MGE length: 11754 bp
Accession: NZ_CP089775 Location: 1165547..1177300 Organism: Mycobacterium tuberculosis strain 02-R1708 Replicon: chromosome
Accession: NZ_CP089775 Location: 1165547..1177300 Organism: Mycobacterium tuberculosis strain 02-R1708 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVJ70_RS05565 (LVJ70_05560) | 1162482..1163051 | + | 570 | WP_003405322.1 | K(+)-transporting ATPase subunit C | - |
| LVJ70_RS05570 (LVJ70_05565) | 1163055..1164584 | - | 1530 | WP_003405324.1 | HAMP domain-containing sensor histidine kinase | - |
| LVJ70_RS05575 (LVJ70_05570) | 1164592..1165365 | - | 774 | WP_003405328.1 | two-component system response regulator TrcR | - |
| LVJ70_RS05580 (LVJ70_05575) | 1165547..1166987 | - | 1441 | Protein_1099 | ISNCY family transposase | - |
| LVJ70_RS05585 (LVJ70_05580) | 1167173..1167457 | - | 285 | WP_003898699.1 | hypothetical protein | VF |
| LVJ70_RS05590 (LVJ70_05585) | 1167484..1167780 | - | 297 | WP_003405345.1 | type VII secretion system ESX-5 protein EsxJ | - |
| LVJ70_RS05595 (LVJ70_05590) | 1167926..1169101 | - | 1176 | WP_003405368.1 | hypothetical protein | VF |
| LVJ70_RS05600 (LVJ70_05595) | 1169178..1170005 | - | 828 | WP_003405370.1 | PE domain-containing protein | - |
| LVJ70_RS05605 (LVJ70_05600) | 1170793..1171032 | - | 240 | WP_003405375.1 | hypothetical protein | - |
| LVJ70_RS05610 (LVJ70_05605) | 1171201..1172127 | - | 927 | WP_078386733.1 | IS5 family transposase ISMt1 | Transposase |
| LVJ70_RS05615 (LVJ70_05610) | 1172410..1173435 | - | 1026 | WP_003405514.1 | serine protease | - |
| LVJ70_RS05620 (LVJ70_05615) | 1173682..1174305 | + | 624 | WP_003405517.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| LVJ70_RS05625 (LVJ70_05620) | 1174302..1175183 | + | 882 | WP_003898703.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| LVJ70_RS05630 (LVJ70_05625) | 1176053..1177300 | + | 1248 | WP_003900260.1 | IS256 family transposase IS1081 | Transposase |
| LVJ70_RS05635 (LVJ70_05630) | 1177668..1178783 | - | 1116 | WP_003405582.1 | hypothetical protein | - |
| LVJ70_RS05640 (LVJ70_05635) | 1178740..1178943 | - | 204 | WP_003405585.1 | hypothetical protein | - |
| LVJ70_RS05645 (LVJ70_05640) | 1179016..1179462 | + | 447 | WP_003405595.1 | oxidation-sensing regulator MosR | - |
| LVJ70_RS05650 (LVJ70_05645) | 1179511..1180416 | + | 906 | WP_003405600.1 | SDR family oxidoreductase | - |
| LVJ70_RS05655 (LVJ70_05650) | 1180575..1180754 | - | 180 | WP_023637525.1 | helix-turn-helix domain-containing protein | - |
| LVJ70_RS05660 (LVJ70_05655) | 1180935..1181384 | - | 450 | Protein_1115 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA10016 | NC_000962 | 1158918..1170670 | 0.001 |