MGE detailed information
MGE type: IScluster/Tn MGE length: 11755 bp
Accession: NZ_CP089774 Location: 1165547..1177301 Organism: Mycobacterium tuberculosis strain 02-R0894 Replicon: chromosome
Accession: NZ_CP089774 Location: 1165547..1177301 Organism: Mycobacterium tuberculosis strain 02-R0894 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVJ69_RS05565 (LVJ69_05560) | 1162482..1163051 | + | 570 | WP_003405322.1 | K(+)-transporting ATPase subunit C | - |
| LVJ69_RS05570 (LVJ69_05565) | 1163055..1164584 | - | 1530 | WP_003405324.1 | HAMP domain-containing sensor histidine kinase | - |
| LVJ69_RS05575 (LVJ69_05570) | 1164592..1165365 | - | 774 | WP_003405328.1 | two-component system response regulator TrcR | - |
| LVJ69_RS05580 (LVJ69_05575) | 1165547..1166987 | - | 1441 | Protein_1099 | ISNCY family transposase | - |
| LVJ69_RS05585 (LVJ69_05580) | 1167173..1167457 | - | 285 | WP_003898699.1 | ESAT-6-like protein EsxI | VF |
| LVJ69_RS05590 (LVJ69_05585) | 1167484..1167780 | - | 297 | WP_003405345.1 | type VII secretion system ESX-5 protein EsxJ | - |
| LVJ69_RS05595 (LVJ69_05590) | 1167926..1169101 | - | 1176 | WP_003405368.1 | PPE family protein PPE15 | VF |
| LVJ69_RS05600 (LVJ69_05595) | 1169178..1170005 | - | 828 | WP_003405370.1 | PE domain-containing protein | - |
| LVJ69_RS05605 (LVJ69_05600) | 1170793..1171032 | - | 240 | WP_003405375.1 | hypothetical protein | - |
| LVJ69_RS05610 (LVJ69_05605) | 1171201..1172128 | - | 928 | Protein_1105 | IS5-like element ISMt1 family transposase | - |
| LVJ69_RS05615 (LVJ69_05610) | 1172411..1173436 | - | 1026 | WP_003405514.1 | serine protease | - |
| LVJ69_RS05620 (LVJ69_05615) | 1173683..1174306 | + | 624 | WP_003405517.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| LVJ69_RS05625 (LVJ69_05620) | 1174303..1175184 | + | 882 | WP_003898703.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| LVJ69_RS05630 (LVJ69_05625) | 1176054..1177301 | + | 1248 | WP_003900260.1 | IS256 family transposase IS1081 | Transposase |
| LVJ69_RS05635 (LVJ69_05630) | 1177669..1178784 | - | 1116 | WP_003405582.1 | hypothetical protein | - |
| LVJ69_RS05640 (LVJ69_05635) | 1178741..1178944 | - | 204 | WP_003405585.1 | hypothetical protein | - |
| LVJ69_RS05645 (LVJ69_05640) | 1179017..1179463 | + | 447 | WP_003405595.1 | oxidation-sensing regulator MosR | - |
| LVJ69_RS05650 (LVJ69_05645) | 1179512..1180417 | + | 906 | WP_003405600.1 | SDR family oxidoreductase | - |
| LVJ69_RS05655 (LVJ69_05650) | 1180576..1180755 | - | 180 | WP_023637525.1 | helix-turn-helix domain-containing protein | - |
| LVJ69_RS05660 (LVJ69_05655) | 1180936..1181385 | - | 450 | Protein_1115 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA10016 | NC_000962 | 1158918..1170670 | 0.001 |