MGE detailed information
MGE type: IScluster/Tn MGE length: 11755 bp
Accession: NZ_CP089773 Location: 1165212..1176966 Organism: Mycobacterium tuberculosis strain 01-R1430 Replicon: chromosome
Accession: NZ_CP089773 Location: 1165212..1176966 Organism: Mycobacterium tuberculosis strain 01-R1430 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVJ68_RS05540 (LVJ68_05535) | 1162147..1162716 | + | 570 | WP_003405322.1 | K(+)-transporting ATPase subunit C | - |
| LVJ68_RS05545 (LVJ68_05540) | 1162720..1164249 | - | 1530 | WP_070892751.1 | HAMP domain-containing sensor histidine kinase | - |
| LVJ68_RS05550 (LVJ68_05545) | 1164257..1165030 | - | 774 | WP_003405328.1 | two-component system response regulator TrcR | - |
| LVJ68_RS05555 (LVJ68_05550) | 1165212..1166652 | - | 1441 | Protein_1094 | ISNCY family transposase | - |
| LVJ68_RS05560 (LVJ68_05555) | 1166838..1167122 | - | 285 | WP_003898699.1 | ESAT-6-like protein EsxI | VF |
| LVJ68_RS05565 (LVJ68_05560) | 1167149..1167445 | - | 297 | WP_003405345.1 | type VII secretion system ESX-5 protein EsxJ | - |
| LVJ68_RS05570 (LVJ68_05565) | 1167591..1168766 | - | 1176 | WP_003405368.1 | PPE family protein PPE15 | VF |
| LVJ68_RS05575 (LVJ68_05570) | 1168843..1169670 | - | 828 | WP_003405370.1 | PE domain-containing protein | - |
| LVJ68_RS05580 (LVJ68_05575) | 1170458..1170697 | - | 240 | WP_009936438.1 | hypothetical protein | - |
| LVJ68_RS05585 (LVJ68_05580) | 1170866..1171793 | - | 928 | Protein_1100 | IS5-like element ISMt1 family transposase | - |
| LVJ68_RS05590 (LVJ68_05585) | 1172076..1173101 | - | 1026 | WP_003405514.1 | serine protease | - |
| LVJ68_RS05595 (LVJ68_05590) | 1173348..1173971 | + | 624 | WP_003405517.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| LVJ68_RS05600 (LVJ68_05595) | 1173968..1174849 | + | 882 | WP_003898703.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| LVJ68_RS05605 (LVJ68_05600) | 1175719..1176966 | + | 1248 | WP_003901078.1 | IS256 family transposase IS1081 | Transposase |
| LVJ68_RS05610 (LVJ68_05605) | 1177334..1178449 | - | 1116 | WP_003405582.1 | hypothetical protein | - |
| LVJ68_RS05615 (LVJ68_05610) | 1178406..1178609 | - | 204 | WP_003405585.1 | hypothetical protein | - |
| LVJ68_RS05620 (LVJ68_05615) | 1178682..1179128 | + | 447 | WP_003405595.1 | oxidation-sensing regulator MosR | - |
| LVJ68_RS05625 (LVJ68_05620) | 1179177..1180082 | + | 906 | WP_003405600.1 | SDR family oxidoreductase | - |
| LVJ68_RS05630 (LVJ68_05625) | 1180241..1180420 | - | 180 | WP_023637525.1 | helix-turn-helix domain-containing protein | - |
| LVJ68_RS05635 (LVJ68_05630) | 1180601..1181050 | - | 450 | Protein_1110 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA10016 | NC_000962 | 1158918..1170670 | 0 |