MGE detailed information
MGE type: Mobilizable plasmid MGE length: 99554 bp
Accession: NZ_CP089770 Location: 1..99554 Organism: Klebsiella pneumoniae strain HKE9 Replicon: plasmid unnamed2
Accession: NZ_CP089770 Location: 1..99554 Organism: Klebsiella pneumoniae strain HKE9 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVO52_RS26475 (LVO52_26445) | 1..987 | + | 987 | WP_001419739.1 | type IV secretion system protein | - |
| LVO52_RS26480 (LVO52_26450) | 993..1640 | + | 648 | WP_001419738.1 | hypothetical protein | VF |
| LVO52_RS26485 (LVO52_26455) | 1644..1880 | + | 237 | WP_000750964.1 | EexN family lipoprotein | - |
| LVO52_RS26490 (LVO52_26460) | 1927..2736 | - | 810 | WP_001419737.1 | DUF5710 domain-containing protein | - |
| LVO52_RS26495 (LVO52_26465) | 2784..3416 | + | 633 | WP_001419736.1 | hypothetical protein | - |
| LVO52_RS26500 (LVO52_26470) | 3483..3782 | + | 300 | WP_000835763.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LVO52_RS26505 (LVO52_26475) | 3785..5020 | + | 1236 | WP_001419735.1 | hypothetical protein | VF |
| LVO52_RS26510 (LVO52_26480) | 5026..5463 | + | 438 | WP_015387358.1 | type IV pilus biogenesis protein PilM | - |
| LVO52_RS26515 (LVO52_26485) | 5803..6201 | + | 399 | WP_001708012.1 | hypothetical protein | - |
| LVO52_RS26520 (LVO52_26490) | 6222..6806 | + | 585 | WP_001401693.1 | Type IV secretion system protein virB1 | VF |
| LVO52_RS26525 (LVO52_26495) | 6806..7096 | + | 291 | WP_000865479.1 | conjugal transfer protein | - |
| LVO52_RS26530 (LVO52_26500) | 7167..7487 | + | 321 | WP_000362081.1 | VirB3 family type IV secretion system protein | - |
| LVO52_RS26535 (LVO52_26505) | 7493..9850 | + | 2358 | WP_015387356.1 | VirB4 family type IV secretion system protein | - |
| LVO52_RS26540 (LVO52_26510) | 10014..10748 | + | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| LVO52_RS26545 (LVO52_26515) | 10745..11515 | + | 771 | WP_015387355.1 | Type IV secretion system protein PtlF | VF |
| LVO52_RS26550 (LVO52_26520) | 11505..12644 | + | 1140 | WP_015387354.1 | Type IV secretion system protein virB10 | VF |
| LVO52_RS26555 (LVO52_26525) | 12663..13718 | + | 1056 | WP_001059977.1 | Type IV secretion system protein VirB11 | VF |
| LVO52_RS26560 (LVO52_26530) | 13734..15692 | + | 1959 | Protein_17 | type IV secretory system conjugative DNA transfer family protein | - |
| LVO52_RS26565 (LVO52_26535) | 15739..16257 | + | 519 | WP_015387353.1 | YfdA protein | - |
| LVO52_RS26570 (LVO52_26540) | 16250..17893 | + | 1644 | WP_001035590.1 | Outer membrane lipoprotein BfpB | VF |
| LVO52_RS26575 (LVO52_26545) | 17944..19254 | + | 1311 | WP_001420476.1 | type 4b pilus protein PilO2 | - |
| LVO52_RS26580 (LVO52_26550) | 19238..19732 | + | 495 | WP_000912551.1 | type IV pilus biogenesis protein PilP | - |
| LVO52_RS26585 (LVO52_26555) | 19732..21293 | + | 1562 | Protein_22 | putative type II secretion system protein HxcR | VF |
| LVO52_RS26590 (LVO52_26560) | 21284..22393 | + | 1110 | WP_277696118.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| LVO52_RS26595 (LVO52_26565) | 22438..22995 | + | 558 | WP_000095051.1 | type 4 pilus major pilin | - |
| LVO52_RS26600 (LVO52_26570) | 23062..23544 | + | 483 | WP_001258095.1 | hypothetical protein | VF |
| LVO52_RS26605 (LVO52_26575) | 23548..24183 | + | 636 | WP_000934978.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| LVO52_RS26610 (LVO52_26580) | 24196..25482 | + | 1287 | WP_015057162.1 | hypothetical protein | VF |
| LVO52_RS26615 (LVO52_26585) | 26430..27554 | + | 1125 | WP_000486719.1 | site-specific integrase | - |
| LVO52_RS26620 (LVO52_26590) | 27566..28219 | + | 654 | WP_015387348.1 | hypothetical protein | - |
| LVO52_RS26625 (LVO52_26595) | 28266..28784 | + | 519 | WP_000698399.1 | thermonuclease family protein | - |
| LVO52_RS26630 (LVO52_26600) | 28800..29204 | + | 405 | WP_001218543.1 | hypothetical protein | - |
| LVO52_RS26635 (LVO52_26605) | 29568..30155 | + | 588 | WP_015387347.1 | DUF6012 family protein | - |
| LVO52_RS26640 (LVO52_26610) | 30167..32323 | + | 2157 | WP_000765172.1 | type IA DNA topoisomerase | - |
| LVO52_RS26645 (LVO52_26615) | 32798..33118 | + | 321 | WP_000668719.1 | hypothetical protein | - |
| LVO52_RS26650 (LVO52_26620) | 33237..33443 | + | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| LVO52_RS26655 (LVO52_26625) | 33589..34020 | + | 432 | WP_000465832.1 | hypothetical protein | - |
| LVO52_RS26660 (LVO52_26630) | 34265..34705 | + | 441 | WP_015387343.1 | hypothetical protein | - |
| LVO52_RS26665 (LVO52_26635) | 34748..38953 | - | 4206 | WP_015387342.1 | hypothetical protein | - |
| LVO52_RS26670 (LVO52_26640) | 38950..39291 | - | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| LVO52_RS26675 (LVO52_26645) | 39660..40061 | + | 402 | WP_000717860.1 | hypothetical protein | - |
| LVO52_RS26680 (LVO52_26650) | 40079..40831 | + | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| LVO52_RS26685 (LVO52_26655) | 40833..41540 | + | 708 | WP_000108796.1 | hypothetical protein | - |
| LVO52_RS26690 (LVO52_26660) | 41560..41979 | + | 420 | WP_001708405.1 | hypothetical protein | - |
| LVO52_RS26695 (LVO52_26665) | 41981..42244 | + | 264 | WP_000224227.1 | hypothetical protein | - |
| LVO52_RS26700 (LVO52_26670) | 42281..42796 | + | 516 | WP_001229189.1 | hypothetical protein | - |
| LVO52_RS26705 (LVO52_26675) | 42925..43110 | + | 186 | Protein_46 | hypothetical protein | - |
| LVO52_RS26710 (LVO52_26680) | 43257..43688 | - | 432 | WP_277696120.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LVO52_RS26715 (LVO52_26685) | 43713..43895 | - | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| LVO52_RS26720 (LVO52_26690) | 44192..44635 | + | 444 | WP_000192626.1 | hypothetical protein | - |
| LVO52_RS26725 (LVO52_26695) | 45057..45350 | - | 294 | WP_000954637.1 | hypothetical protein | - |
| LVO52_RS26730 (LVO52_26700) | 45365..45739 | - | 375 | WP_015387341.1 | hypothetical protein | - |
| LVO52_RS26735 (LVO52_26705) | 45791..46078 | - | 288 | WP_000673430.1 | hypothetical protein | - |
| LVO52_RS26740 (LVO52_26710) | 46828..48090 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| LVO52_RS26745 (LVO52_26715) | 48343..49219 | + | 877 | Protein_54 | Beta-lactamase CTX-M-1 | ARG |
| LVO52_RS26750 (LVO52_26720) | 49266..49610 | - | 345 | Protein_55 | WbuC family cupin fold metalloprotein | - |
| LVO52_RS26755 (LVO52_26725) | 49735..49977 | - | 243 | WP_000151456.1 | hypothetical protein | - |
| LVO52_RS26760 (LVO52_26730) | 50100..51080 | + | 981 | WP_000145796.1 | Type IV secretion system protein VirB11 | VF |
| LVO52_RS26765 (LVO52_26735) | 51096..53054 | + | 1959 | WP_277696121.1 | type IV secretory system conjugative DNA transfer family protein | - |
| LVO52_RS26770 (LVO52_26740) | 53101..53619 | + | 519 | WP_015387353.1 | YfdA protein | - |
| LVO52_RS26775 (LVO52_26745) | 53612..55255 | + | 1644 | WP_001035590.1 | Outer membrane lipoprotein BfpB | VF |
| LVO52_RS26780 (LVO52_26750) | 55306..56619 | + | 1314 | WP_277696122.1 | type 4b pilus protein PilO2 | - |
| LVO52_RS26785 (LVO52_26755) | 56603..57097 | + | 495 | WP_000912551.1 | type IV pilus biogenesis protein PilP | - |
| LVO52_RS26790 (LVO52_26760) | 57122..58658 | + | 1537 | Protein_63 | ATPase, T2SS/T4P/T4SS family | - |
| LVO52_RS26795 (LVO52_26765) | 58649..59653 | + | 1005 | WP_277696123.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| LVO52_RS26800 (LVO52_26770) | 59800..60357 | + | 558 | WP_000095051.1 | type 4 pilus major pilin | - |
| LVO52_RS26805 (LVO52_26775) | 60424..60906 | + | 483 | WP_001258095.1 | hypothetical protein | VF |
| LVO52_RS26810 (LVO52_26780) | 60910..61545 | + | 636 | WP_000934978.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| LVO52_RS26815 (LVO52_26785) | 61558..62844 | + | 1287 | WP_015057162.1 | hypothetical protein | VF |
| LVO52_RS26820 (LVO52_26790) | 63792..64916 | + | 1125 | WP_000486719.1 | site-specific integrase | - |
| LVO52_RS26825 (LVO52_26795) | 64928..65581 | + | 654 | WP_015387348.1 | hypothetical protein | - |
| LVO52_RS26830 (LVO52_26800) | 65628..66146 | + | 519 | WP_000698399.1 | thermonuclease family protein | - |
| LVO52_RS26835 (LVO52_26805) | 66162..66566 | + | 405 | WP_001218543.1 | hypothetical protein | - |
| LVO52_RS26840 (LVO52_26810) | 66930..67517 | + | 588 | WP_015387347.1 | DUF6012 family protein | - |
| LVO52_RS26845 (LVO52_26815) | 67529..69685 | + | 2157 | WP_000765172.1 | type IA DNA topoisomerase | - |
| LVO52_RS26850 (LVO52_26820) | 70160..70480 | + | 321 | WP_000668719.1 | hypothetical protein | - |
| LVO52_RS26855 (LVO52_26825) | 70599..70805 | + | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| LVO52_RS26860 (LVO52_26830) | 70951..71382 | + | 432 | WP_000465832.1 | hypothetical protein | - |
| LVO52_RS26865 (LVO52_26835) | 71627..72067 | + | 441 | WP_015387343.1 | hypothetical protein | - |
| LVO52_RS26870 (LVO52_26840) | 72110..76315 | - | 4206 | WP_015387342.1 | hypothetical protein | - |
| LVO52_RS26875 (LVO52_26845) | 76312..76653 | - | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| LVO52_RS26880 (LVO52_26850) | 77022..77423 | + | 402 | WP_000717860.1 | hypothetical protein | - |
| LVO52_RS26885 (LVO52_26855) | 77441..78193 | + | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| LVO52_RS26890 (LVO52_26860) | 78195..78902 | + | 708 | WP_000108796.1 | hypothetical protein | - |
| LVO52_RS26895 (LVO52_26865) | 78922..79341 | + | 420 | WP_001708405.1 | hypothetical protein | - |
| LVO52_RS26900 (LVO52_26870) | 79343..79606 | + | 264 | WP_000224227.1 | hypothetical protein | - |
| LVO52_RS26905 (LVO52_26875) | 79643..80158 | + | 516 | WP_001229189.1 | hypothetical protein | - |
| LVO52_RS26910 (LVO52_26880) | 80287..80472 | + | 186 | Protein_87 | hypothetical protein | - |
| LVO52_RS26915 (LVO52_26885) | 80606..81043 | - | 438 | WP_000466318.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LVO52_RS26920 (LVO52_26890) | 81068..81250 | - | 183 | WP_000833470.1 | type II toxin-antitoxin system HicA family toxin | - |
| LVO52_RS26925 (LVO52_26895) | 81547..81990 | + | 444 | WP_000192626.1 | hypothetical protein | - |
| LVO52_RS26930 (LVO52_26900) | 82412..82705 | - | 294 | WP_000954637.1 | hypothetical protein | - |
| LVO52_RS26935 (LVO52_26905) | 82720..83094 | - | 375 | WP_015387341.1 | hypothetical protein | - |
| LVO52_RS26940 (LVO52_26910) | 83146..83433 | - | 288 | WP_000673430.1 | hypothetical protein | - |
| LVO52_RS26945 (LVO52_26915) | 84183..85445 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| LVO52_RS26950 (LVO52_26920) | 85698..86573 | + | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| LVO52_RS26955 (LVO52_26925) | 86620..86964 | - | 345 | Protein_96 | WbuC family cupin fold metalloprotein | - |
| LVO52_RS26960 (LVO52_26930) | 87089..87331 | - | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| LVO52_RS26965 (LVO52_26935) | 87328..87582 | - | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| LVO52_RS26970 (LVO52_26940) | 87579..88121 | - | 543 | WP_001083904.1 | hypothetical protein | - |
| LVO52_RS26975 (LVO52_26945) | 88225..88740 | - | 516 | WP_001025393.1 | J domain-containing protein | - |
| LVO52_RS26980 (LVO52_26950) | 89144..89473 | - | 330 | WP_000855119.1 | hypothetical protein | - |
| LVO52_RS26985 (LVO52_26955) | 90060..90725 | + | 666 | WP_015387337.1 | division plane positioning ATPase MipZ | - |
| LVO52_RS26990 (LVO52_26960) | 90799..91083 | + | 285 | WP_001162371.1 | hypothetical protein | - |
| LVO52_RS26995 (LVO52_26965) | 91101..91697 | - | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| LVO52_RS27000 (LVO52_26970) | 91846..91968 | - | 123 | WP_223202818.1 | Hok/Gef family protein | - |
| LVO52_RS27005 (LVO52_26975) | 91913..92065 | - | 153 | Protein_106 | DUF5431 family protein | - |
| LVO52_RS27010 (LVO52_26980) | 93411..94439 | - | 1029 | WP_024172575.1 | plasmid replication initiator RepA | - |
| LVO52_RS27015 (LVO52_26985) | 95525..96031 | + | 507 | WP_001358485.1 | CaiF/GrlA family transcriptional regulator | - |
| LVO52_RS27020 (LVO52_26990) | 96024..96218 | + | 195 | WP_000049865.1 | DUF1187 family protein | - |
| LVO52_RS27025 (LVO52_26995) | 96264..97217 | + | 954 | WP_072105959.1 | SPFH domain-containing protein | - |
| LVO52_RS27030 (LVO52_27000) | 97290..97733 | + | 444 | WP_000964840.1 | NfeD family protein | - |
| LVO52_RS27035 (LVO52_27005) | 97737..97907 | + | 171 | WP_000550721.1 | hypothetical protein | - |
| LVO52_RS27040 (LVO52_27010) | 97918..98580 | + | 663 | WP_001419740.1 | hypothetical protein | - |
| LVO52_RS27045 (LVO52_27015) | 98764..98979 | + | 216 | WP_001360344.1 | hypothetical protein | - |
| LVO52_RS27050 (LVO52_27020) | 98995..99297 | + | 303 | WP_001360345.1 | hypothetical protein | - |
| LVO52_RS27055 (LVO52_27025) | 99294..99551 | + | 258 | WP_000739144.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|