MGE detailed information
MGE type: IScluster/Tn MGE length: 11755 bp
Accession: NZ_CP089611 Location: 1163732..1175486 Organism: Mycobacterium tuberculosis strain I0004240-3 Replicon: chromosome
Accession: NZ_CP089611 Location: 1163732..1175486 Organism: Mycobacterium tuberculosis strain I0004240-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVJ90_RS05545 (LVJ90_05540) | 1160667..1161236 | + | 570 | WP_003405322.1 | K(+)-transporting ATPase subunit C | - |
| LVJ90_RS05550 (LVJ90_05545) | 1161240..1162769 | - | 1530 | WP_003405324.1 | HAMP domain-containing sensor histidine kinase | - |
| LVJ90_RS05555 (LVJ90_05550) | 1162777..1163550 | - | 774 | WP_003405328.1 | two-component system response regulator TrcR | - |
| LVJ90_RS05560 (LVJ90_05555) | 1163732..1165172 | - | 1441 | Protein_1095 | ISNCY family transposase | - |
| LVJ90_RS05565 (LVJ90_05560) | 1165358..1165642 | - | 285 | WP_003898699.1 | ESAT-6-like protein EsxI | VF |
| LVJ90_RS05570 (LVJ90_05565) | 1165669..1165965 | - | 297 | WP_003405345.1 | type VII secretion system ESX-5 protein EsxJ | - |
| LVJ90_RS05575 (LVJ90_05570) | 1166111..1167286 | - | 1176 | WP_003405368.1 | PPE family protein PPE15 | VF |
| LVJ90_RS05580 (LVJ90_05575) | 1167363..1168190 | - | 828 | WP_003405370.1 | PE domain-containing protein | - |
| LVJ90_RS05585 (LVJ90_05580) | 1168978..1169217 | - | 240 | WP_003405375.1 | hypothetical protein | - |
| LVJ90_RS05590 (LVJ90_05585) | 1169386..1170313 | - | 928 | Protein_1101 | IS5-like element ISMt1 family transposase | - |
| LVJ90_RS05595 (LVJ90_05590) | 1170596..1171621 | - | 1026 | WP_003405514.1 | serine protease | - |
| LVJ90_RS05600 (LVJ90_05595) | 1171868..1172491 | + | 624 | WP_003405517.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| LVJ90_RS05605 (LVJ90_05600) | 1172488..1173369 | + | 882 | WP_003898703.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| LVJ90_RS05610 (LVJ90_05605) | 1174239..1175486 | + | 1248 | WP_003900260.1 | IS256 family transposase IS1081 | Transposase |
| LVJ90_RS05615 (LVJ90_05610) | 1175854..1176969 | - | 1116 | WP_003405582.1 | hypothetical protein | - |
| LVJ90_RS05620 (LVJ90_05615) | 1176926..1177129 | - | 204 | WP_003405585.1 | hypothetical protein | - |
| LVJ90_RS05625 (LVJ90_05620) | 1177202..1177648 | + | 447 | WP_003405595.1 | oxidation-sensing regulator MosR | - |
| LVJ90_RS05630 (LVJ90_05625) | 1177697..1178602 | + | 906 | WP_003405600.1 | SDR family oxidoreductase | - |
| LVJ90_RS05635 (LVJ90_05630) | 1178761..1178940 | - | 180 | WP_023637525.1 | helix-turn-helix domain-containing protein | - |
| LVJ90_RS05640 (LVJ90_05635) | 1179121..1179570 | - | 450 | Protein_1111 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA10016 | NC_000962 | 1158918..1170670 | 0.001 |