MGE detailed information
MGE type: IScluster/Tn MGE length: 11755 bp
Accession: NZ_CP089610 Location: 1163917..1175671 Organism: Mycobacterium tuberculosis strain I0004290-8 Replicon: chromosome
Accession: NZ_CP089610 Location: 1163917..1175671 Organism: Mycobacterium tuberculosis strain I0004290-8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVJ91_RS05520 (LVJ91_05520) | 1160852..1161421 | + | 570 | WP_003405322.1 | K(+)-transporting ATPase subunit C | - |
| LVJ91_RS05525 (LVJ91_05525) | 1161425..1162954 | - | 1530 | WP_003405324.1 | HAMP domain-containing sensor histidine kinase | - |
| LVJ91_RS05530 (LVJ91_05530) | 1162962..1163735 | - | 774 | WP_003405328.1 | two-component system response regulator TrcR | - |
| LVJ91_RS05535 (LVJ91_05535) | 1163917..1165357 | - | 1441 | Protein_1090 | ISNCY family transposase | - |
| LVJ91_RS05540 (LVJ91_05540) | 1165543..1165827 | - | 285 | WP_003898699.1 | hypothetical protein | VF |
| LVJ91_RS05545 (LVJ91_05545) | 1165854..1166150 | - | 297 | WP_003405345.1 | type VII secretion system ESX-5 protein EsxJ | - |
| LVJ91_RS05550 (LVJ91_05550) | 1166296..1167471 | - | 1176 | WP_003405368.1 | hypothetical protein | VF |
| LVJ91_RS05555 (LVJ91_05555) | 1167548..1168375 | - | 828 | WP_003405370.1 | PE domain-containing protein | - |
| LVJ91_RS05560 (LVJ91_05560) | 1169163..1169402 | - | 240 | WP_009936438.1 | hypothetical protein | - |
| LVJ91_RS05565 (LVJ91_05565) | 1169571..1170498 | - | 928 | Protein_1096 | IS5-like element ISMt1 family transposase | - |
| LVJ91_RS05570 (LVJ91_05570) | 1170781..1171806 | - | 1026 | WP_003405514.1 | serine protease | - |
| LVJ91_RS05575 (LVJ91_05575) | 1172053..1172676 | + | 624 | WP_003405517.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| LVJ91_RS05580 (LVJ91_05580) | 1172673..1173554 | + | 882 | WP_003898703.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| LVJ91_RS05585 (LVJ91_05585) | 1174424..1175671 | + | 1248 | WP_003900260.1 | IS256 family transposase IS1081 | Transposase |
| LVJ91_RS05590 (LVJ91_05590) | 1176039..1177154 | - | 1116 | WP_003405582.1 | hypothetical protein | - |
| LVJ91_RS05595 (LVJ91_05595) | 1177111..1177314 | - | 204 | WP_003405585.1 | hypothetical protein | - |
| LVJ91_RS05600 (LVJ91_05600) | 1177387..1177833 | + | 447 | WP_003405595.1 | oxidation-sensing regulator MosR | - |
| LVJ91_RS05605 (LVJ91_05605) | 1177882..1178787 | + | 906 | WP_003405600.1 | SDR family oxidoreductase | - |
| LVJ91_RS05610 (LVJ91_05610) | 1178946..1179125 | - | 180 | WP_023637525.1 | helix-turn-helix domain-containing protein | - |
| LVJ91_RS05615 (LVJ91_05615) | 1179306..1179755 | - | 450 | Protein_1106 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA10016 | NC_000962 | 1158918..1170670 | 0.001 |