MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 136868 bp
Accession: NZ_CP089396 Location: 1..136868 Organism: Klebsiella michiganensis strain Kox58 Replicon: plasmid pKOX58_1
Accession: NZ_CP089396 Location: 1..136868 Organism: Klebsiella michiganensis strain Kox58 Replicon: plasmid pKOX58_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LUW95_RS28700 (LUW95_28700) | 194..475 | - | 282 | WP_064392542.1 | hypothetical protein | - |
| LUW95_RS28705 (LUW95_28705) | 512..2386 | - | 1875 | WP_064392546.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| LUW95_RS28710 (LUW95_28710) | 2383..3000 | - | 618 | WP_064392548.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| LUW95_RS28715 (LUW95_28715) | 3013..3996 | - | 984 | WP_177342650.1 | conjugal transfer pilus assembly protein TraU | - |
| LUW95_RS28720 (LUW95_28720) | 4016..4642 | - | 627 | WP_064392552.1 | type-F conjugative transfer system protein TraW | - |
| LUW95_RS28725 (LUW95_28725) | 4639..5040 | - | 402 | WP_064381408.1 | type-F conjugative transfer system protein TrbI | - |
| LUW95_RS28730 (LUW95_28730) | 5073..7712 | - | 2640 | WP_064381374.1 | type IV secretion system protein TraC | - |
| LUW95_RS28735 (LUW95_28735) | 7843..8247 | - | 405 | WP_064174410.1 | hypothetical protein | - |
| LUW95_RS28740 (LUW95_28740) | 8244..8468 | - | 225 | WP_064381372.1 | hypothetical protein | - |
| LUW95_RS28745 (LUW95_28745) | 8492..8785 | - | 294 | WP_049071697.1 | hypothetical protein | - |
| LUW95_RS28750 (LUW95_28750) | 8814..9218 | - | 405 | WP_064381370.1 | hypothetical protein | - |
| LUW95_RS28755 (LUW95_28755) | 9335..9916 | - | 582 | WP_064381368.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LUW95_RS28760 (LUW95_28760) | 9939..10163 | - | 225 | WP_064381366.1 | hypothetical protein | - |
| LUW95_RS28765 (LUW95_28765) | 10144..10740 | - | 597 | WP_136404571.1 | conjugal transfer protein TraP | - |
| LUW95_RS28770 (LUW95_28770) | 10733..12148 | - | 1416 | WP_064381364.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| LUW95_RS28775 (LUW95_28775) | 12148..12888 | - | 741 | WP_064174405.1 | type-F conjugative transfer system secretin TraK | - |
| LUW95_RS28780 (LUW95_28780) | 12875..13441 | - | 567 | WP_020323527.1 | type IV conjugative transfer system protein TraE | - |
| LUW95_RS28785 (LUW95_28785) | 13461..13766 | - | 306 | WP_020323523.1 | type IV conjugative transfer system protein TraL | - |
| LUW95_RS28790 (LUW95_28790) | 13780..14145 | - | 366 | WP_064381359.1 | type IV conjugative transfer system pilin TraA | - |
| LUW95_RS28795 (LUW95_28795) | 14209..14373 | - | 165 | WP_032426810.1 | TraY domain-containing protein | - |
| LUW95_RS28800 (LUW95_28800) | 14549..15241 | - | 693 | WP_064381358.1 | hypothetical protein | - |
| LUW95_RS28805 (LUW95_28805) | 15479..15871 | - | 393 | WP_032426796.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LUW95_RS28810 (LUW95_28810) | 16378..16800 | + | 423 | WP_077268549.1 | hypothetical protein | VF |
| LUW95_RS28815 (LUW95_28815) | 16823..17365 | - | 543 | WP_064392555.1 | antirestriction protein | - |
| LUW95_RS28820 (LUW95_28820) | 18014..18847 | - | 834 | WP_064392557.1 | N-6 DNA methylase | - |
| LUW95_RS28825 (LUW95_28825) | 18894..19124 | - | 231 | WP_032744242.1 | hypothetical protein | - |
| LUW95_RS28830 (LUW95_28830) | 19215..19562 | - | 348 | WP_053390249.1 | hypothetical protein | - |
| LUW95_RS28835 (LUW95_28835) | 19617..19955 | - | 339 | WP_053390250.1 | hypothetical protein | - |
| LUW95_RS28840 (LUW95_28840) | 20254..20373 | + | 120 | Protein_29 | hypothetical protein | - |
| LUW95_RS28845 (LUW95_28845) | 20700..21020 | - | 321 | WP_060415459.1 | hypothetical protein | - |
| LUW95_RS28850 (LUW95_28850) | 21047..21310 | - | 264 | WP_064392558.1 | DNA polymerase III subunit theta | - |
| LUW95_RS28855 (LUW95_28855) | 21511..21702 | - | 192 | WP_060415457.1 | hypothetical protein | - |
| LUW95_RS28860 (LUW95_28860) | 21744..22250 | - | 507 | WP_064392571.1 | antirestriction protein ArdA | - |
| LUW95_RS28865 (LUW95_28865) | 22295..22723 | - | 429 | WP_039698515.1 | antirestriction protein | - |
| LUW95_RS28870 (LUW95_28870) | 23163..23927 | - | 765 | WP_064392573.1 | hypothetical protein | - |
| LUW95_RS28875 (LUW95_28875) | 23974..24384 | - | 411 | WP_060415454.1 | DUF1380 family protein | - |
| LUW95_RS28880 (LUW95_28880) | 24429..24650 | - | 222 | WP_064392560.1 | hypothetical protein | - |
| LUW95_RS28885 (LUW95_28885) | 24650..25351 | - | 702 | WP_064392561.1 | DNA methyltransferase | - |
| LUW95_RS28890 (LUW95_28890) | 25477..25597 | - | 121 | Protein_39 | hypothetical protein | - |
| LUW95_RS28895 (LUW95_28895) | 25785..26015 | - | 231 | WP_064381621.1 | hypothetical protein | - |
| LUW95_RS28900 (LUW95_28900) | 26223..26648 | + | 426 | WP_032743916.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LUW95_RS28905 (LUW95_28905) | 26648..27922 | + | 1275 | WP_064392563.1 | Y-family DNA polymerase | - |
| LUW95_RS28910 (LUW95_28910) | 28024..28224 | + | 201 | WP_064392565.1 | hypothetical protein | - |
| LUW95_RS28915 (LUW95_28915) | 28267..28497 | - | 231 | WP_032743917.1 | plasmid partition protein ParG | - |
| LUW95_RS28920 (LUW95_28920) | 28547..29167 | - | 621 | WP_064392575.1 | ParA family protein | - |
| LUW95_RS28925 (LUW95_28925) | 30277..30882 | - | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| LUW95_RS28930 (LUW95_28930) | 30977..33397 | + | 2421 | Protein_47 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| LUW95_RS28935 (LUW95_28935) | 33465..34469 | + | 1005 | WP_000427614.1 | IS110 family transposase IS5075 | Transposase |
| LUW95_RS28940 (LUW95_28940) | 34737..35201 | + | 465 | Protein_49 | Tn3 family transposase | - |
| LUW95_RS28945 (LUW95_28945) | 35238..35681 | + | 444 | Protein_50 | DeoR family transcriptional regulator | - |
| LUW95_RS28950 (LUW95_28950) | 35702..36562 | - | 861 | WP_002904004.1 | Beta-lactamase SHV-2 | ARG |
| LUW95_RS28955 (LUW95_28955) | 36699..37403 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LUW95_RS28960 (LUW95_28960) | 37458..40166 | + | 2709 | Protein_53 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| LUW95_RS28965 (LUW95_28965) | 40245..41249 | + | 1005 | WP_000427614.1 | IS110 family transposase IS5075 | Transposase |
| LUW95_RS28970 (LUW95_28970) | 41517..41981 | + | 465 | Protein_55 | Tn3 family transposase | - |
| LUW95_RS28975 (LUW95_28975) | 42022..42540 | - | 519 | WP_022644913.1 | hypothetical protein | - |
| LUW95_RS28980 (LUW95_28980) | 42845..43141 | - | 297 | Protein_57 | IS3 family transposase ISEhe3 | Transposase |
| LUW95_RS28985 (LUW95_28985) | 43158..44240 | - | 1083 | WP_064392781.1 | IS110 family transposase ISEc21 | Transposase |
| LUW95_RS28990 (LUW95_28990) | 44523..45457 | - | 935 | Protein_59 | IS3 family transposase ISEc25 | Transposase |
| LUW95_RS28995 (LUW95_28995) | 45630..46163 | + | 534 | Protein_60 | Recombination-promoting nuclease RpnA | VF |
| LUW95_RS29000 (LUW95_29000) | 46160..46345 | - | 186 | Protein_61 | hypothetical protein | - |
| LUW95_RS29005 (LUW95_29005) | 46956..47651 | + | 696 | WP_040118530.1 | replication initiation protein | - |
| LUW95_RS29010 (LUW95_29010) | 47696..48478 | - | 783 | WP_232421754.1 | site-specific integrase | - |
| LUW95_RS29015 (LUW95_29015) | 48490..49176 | - | 687 | WP_023329039.1 | hypothetical protein | - |
| LUW95_RS29020 (LUW95_29020) | 49210..49569 | - | 360 | WP_064392772.1 | hypothetical protein | - |
| LUW95_RS29025 (LUW95_29025) | 50121..51095 | - | 975 | WP_004098971.1 | sensor domain-containing diguanylate cyclase | - |
| LUW95_RS29030 (LUW95_29030) | 51732..52640 | + | 909 | WP_004098969.1 | HNH endonuclease | - |
| LUW95_RS29035 (LUW95_29035) | 53028..53378 | - | 351 | WP_000694953.1 | DUF305 domain-containing protein | - |
| LUW95_RS29040 (LUW95_29040) | 53522..53953 | - | 432 | WP_000790483.1 | silver-binding protein SilE | - |
| LUW95_RS29045 (LUW95_29045) | 54204..55679 | - | 1476 | WP_000555737.1 | copper/silver sensor histidine kinase SilS | - |
| LUW95_RS29050 (LUW95_29050) | 55672..56352 | - | 681 | WP_000697969.1 | Transcriptional regulatory protein CusR | VF |
| LUW95_RS29055 (LUW95_29055) | 56542..57927 | + | 1386 | WP_023292107.1 | Cation efflux system protein CusC | VF |
| LUW95_RS29060 (LUW95_29060) | 57956..58309 | + | 354 | WP_001246153.1 | cation efflux system protein CusF | - |
| LUW95_RS29065 (LUW95_29065) | 58423..59715 | + | 1293 | WP_004098959.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| LUW95_RS29070 (LUW95_29070) | 59726..62872 | + | 3147 | WP_004098958.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| LUW95_RS29075 (LUW95_29075) | 62959..63399 | + | 441 | WP_000758228.1 | DUF411 domain-containing protein | - |
| LUW95_RS29080 (LUW95_29080) | 63526..65973 | + | 2448 | WP_004098955.1 | Ag(+)-translocating P-type ATPase SilP | - |
| LUW95_RS29085 (LUW95_29085) | 66014..66211 | + | 198 | WP_000843497.1 | DUF2933 domain-containing protein | - |
| LUW95_RS29090 (LUW95_29090) | 66245..66982 | - | 738 | WP_004098947.1 | Murein DD-endopeptidase MepM | VF |
| LUW95_RS29095 (LUW95_29095) | 67271..67720 | - | 450 | WP_001023257.1 | copper resistance protein | - |
| LUW95_RS29100 (LUW95_29100) | 67955..69772 | + | 1818 | WP_000925242.1 | multicopper oxidase PcoA | - |
| LUW95_RS29105 (LUW95_29105) | 69778..70668 | + | 891 | WP_001378118.1 | copper resistance outer membrane transporter PcoB | - |
| LUW95_RS29110 (LUW95_29110) | 70708..71088 | + | 381 | WP_000025662.1 | copper resistance system metallochaperone PcoC | - |
| LUW95_RS29115 (LUW95_29115) | 71093..72022 | + | 930 | WP_004098940.1 | copper resistance inner membrane protein PcoD | - |
| LUW95_RS29120 (LUW95_29120) | 72077..72757 | + | 681 | WP_004098938.1 | Transcriptional activator protein CopR | VF |
| LUW95_RS29125 (LUW95_29125) | 72754..74154 | + | 1401 | WP_004098935.1 | copper resistance membrane spanning protein PcoS | - |
| LUW95_RS29130 (LUW95_29130) | 74370..74804 | + | 435 | WP_004098933.1 | hypothetical protein | - |
| LUW95_RS29135 (LUW95_29135) | 75142..75345 | + | 204 | WP_004098931.1 | HHA domain-containing protein | - |
| LUW95_RS29140 (LUW95_29140) | 75394..75651 | + | 258 | WP_004098928.1 | hypothetical protein | - |
| LUW95_RS29145 (LUW95_29145) | 75727..75981 | + | 255 | WP_004098924.1 | hypothetical protein | - |
| LUW95_RS29150 (LUW95_29150) | 76157..76423 | + | 267 | WP_004098921.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LUW95_RS29155 (LUW95_29155) | 76411..76893 | + | 483 | WP_004098919.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LUW95_RS29160 (LUW95_29160) | 77102..78448 | + | 1347 | WP_077257948.1 | ISNCY family transposase ISLad2 | Transposase |
| LUW95_RS29165 (LUW95_29165) | 78506..79309 | + | 804 | WP_064407410.1 | tetratricopeptide repeat protein | - |
| LUW95_RS29170 (LUW95_29170) | 79323..80684 | + | 1362 | WP_059509657.1 | FRG domain-containing protein | - |
| LUW95_RS29175 (LUW95_29175) | 80916..81356 | + | 441 | WP_059509659.1 | hypothetical protein | - |
| LUW95_RS29180 (LUW95_29180) | 81365..82171 | + | 807 | WP_074189070.1 | SecC motif-containing protein | - |
| LUW95_RS29185 (LUW95_29185) | 82472..84003 | + | 1532 | WP_232421753.1 | IS3 family transposase ISKpn38 | Transposase |
| LUW95_RS29190 (LUW95_29190) | 84101..85479 | + | 1379 | Protein_99 | ISNCY family transposase ISKpn21 | Transposase |
| LUW95_RS29195 (LUW95_29195) | 85535..86167 | - | 633 | WP_040118508.1 | hypothetical protein | - |
| LUW95_RS29200 (LUW95_29200) | 86570..86812 | - | 243 | Protein_101 | SOS response-associated peptidase family protein | - |
| LUW95_RS29205 (LUW95_29205) | 87398..88369 | + | 972 | WP_040118507.1 | alpha/beta fold hydrolase | - |
| LUW95_RS29210 (LUW95_29210) | 88370..88615 | + | 246 | WP_040118506.1 | hypothetical protein | - |
| LUW95_RS29215 (LUW95_29215) | 88655..89349 | + | 695 | WP_087786203.1 | IS1 family transposase IS1N | Transposase |
| LUW95_RS29220 (LUW95_29220) | 89436..89518 | + | 83 | Protein_105 | hypothetical protein | - |
| LUW95_RS29225 (LUW95_29225) | 89554..90636 | + | 1083 | WP_004152286.1 | DNA-binding transcriptional repressor LacI | - |
| LUW95_RS29230 (LUW95_29230) | 90758..93832 | + | 3075 | WP_004098907.1 | beta-galactosidase | - |
| LUW95_RS29235 (LUW95_29235) | 93884..95137 | + | 1254 | WP_004098904.1 | lactose permease | - |
| LUW95_RS29240 (LUW95_29240) | 95347..96327 | - | 981 | WP_004098903.1 | IS5 family transposase IS5D | Transposase |
| LUW95_RS29245 (LUW95_29245) | 96407..98254 | - | 1848 | WP_004098901.1 | diol dehydratase reactivase subunit alpha | - |
| LUW95_RS29250 (LUW95_29250) | 98267..98680 | - | 414 | WP_230182961.1 | diol dehydratase small subunit | - |
| LUW95_RS29255 (LUW95_29255) | 98695..99285 | - | 591 | WP_004098897.1 | propanediol/glycerol family dehydratase medium subunit | - |
| LUW95_RS29260 (LUW95_29260) | 99299..100966 | - | 1668 | WP_004098894.1 | propanediol/glycerol family dehydratase large subunit | - |
| LUW95_RS29265 (LUW95_29265) | 101360..101788 | + | 429 | WP_004098893.1 | heme-binding protein | - |
| LUW95_RS29270 (LUW95_29270) | 101826..102989 | + | 1164 | WP_004098891.1 | 1,3-propanediol dehydrogenase | VF |
| LUW95_RS29275 (LUW95_29275) | 103059..103424 | + | 366 | WP_004098885.1 | glycerol dehydratase reactivase beta/small subunit family protein | - |
| LUW95_RS29280 (LUW95_29280) | 103426..103974 | + | 549 | WP_004098883.1 | cob(I)yrinic acid a,c-diamide adenosyltransferase | - |
| LUW95_RS29285 (LUW95_29285) | 103952..105877 | - | 1926 | WP_004098881.1 | PTS-dependent dihydroxyacetone kinase operon regulatory protein | VF |
| LUW95_RS29290 (LUW95_29290) | 106017..107117 | - | 1101 | WP_004098879.1 | glycerol dehydrogenase | - |
| LUW95_RS29295 (LUW95_29295) | 107714..108784 | + | 1071 | WP_004098877.1 | dihydroxyacetone kinase subunit DhaK | - |
| LUW95_RS29300 (LUW95_29300) | 108796..109428 | + | 633 | WP_004098875.1 | dihydroxyacetone kinase subunit DhaL | - |
| LUW95_RS29305 (LUW95_29305) | 109445..110872 | + | 1428 | WP_004098873.1 | dihydroxyacetone kinase phosphoryl donor subunit DhaM | - |
| LUW95_RS29310 (LUW95_29310) | 111190..111378 | - | 189 | WP_101867698.1 | hypothetical protein | - |
| LUW95_RS29315 (LUW95_29315) | 111336..112313 | + | 978 | WP_004098871.1 | Recombination-promoting nuclease RpnA | VF |
| LUW95_RS29320 (LUW95_29320) | 112621..112899 | - | 279 | WP_004098869.1 | hypothetical protein | - |
| LUW95_RS29325 (LUW95_29325) | 112947..113678 | - | 732 | WP_004098867.1 | HNH endonuclease | - |
| LUW95_RS29330 (LUW95_29330) | 114823..115842 | - | 1020 | WP_004098864.1 | plasmid replication initiator RepA | - |
| LUW95_RS29335 (LUW95_29335) | 115835..115912 | - | 78 | WP_020323529.1 | RepA leader peptide Tap | - |
| LUW95_RS29340 (LUW95_29340) | 116151..116405 | - | 255 | WP_004098862.1 | replication regulatory protein RepA | - |
| LUW95_RS29345 (LUW95_29345) | 116538..117089 | - | 552 | WP_032722152.1 | Phospholipase D | VF |
| LUW95_RS29350 (LUW95_29350) | 117190..117498 | - | 309 | WP_004098858.1 | hypothetical protein | - |
| LUW95_RS29355 (LUW95_29355) | 117495..118145 | - | 651 | WP_004098855.1 | DUF2726 domain-containing protein | - |
| LUW95_RS29360 (LUW95_29360) | 118231..118875 | - | 645 | WP_004098847.1 | hypothetical protein | - |
| LUW95_RS29365 (LUW95_29365) | 119025..119327 | - | 303 | WP_004098845.1 | hypothetical protein | - |
| LUW95_RS29370 (LUW95_29370) | 119532..119879 | - | 348 | WP_004098843.1 | DUF6404 family protein | - |
| LUW95_RS29375 (LUW95_29375) | 119899..120492 | - | 594 | WP_004098841.1 | fertility inhibition protein FinO | - |
| LUW95_RS29380 (LUW95_29380) | 120640..121365 | - | 726 | WP_064381401.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| LUW95_RS29385 (LUW95_29385) | 121422..126683 | - | 5262 | WP_064392532.1 | Multifunctional conjugation protein TraI | Relaxase |
| LUW95_RS29390 (LUW95_29390) | 126683..128983 | - | 2301 | WP_064392534.1 | type IV conjugative transfer system coupling protein TraD | - |
| LUW95_RS29395 (LUW95_29395) | 129221..129748 | - | 528 | WP_064392535.1 | hypothetical protein | - |
| LUW95_RS29400 (LUW95_29400) | 129754..132603 | - | 2850 | WP_064392537.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| LUW95_RS29405 (LUW95_29405) | 132603..134018 | - | 1416 | WP_177342648.1 | conjugal transfer pilus assembly protein TraH | - |
| LUW95_RS29410 (LUW95_29410) | 134406..134936 | - | 531 | WP_077268548.1 | hypothetical protein | - |
| LUW95_RS29415 (LUW95_29415) | 134961..135515 | - | 555 | WP_064381391.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| LUW95_RS29420 (LUW95_29420) | 135487..135726 | - | 240 | WP_064381389.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LUW95_RS29425 (LUW95_29425) | 135737..136489 | - | 753 | WP_064381388.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LUW95_RS29430 (LUW95_29430) | 136508..136834 | - | 327 | WP_064381386.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|