MGE detailed information
MGE type: Genomic_island MGE length: 11328 bp
Accession: NZ_CP089313 Location: 857366..868693 Organism: Salmonella enterica subsp. enterica serovar Indiana strain YZ21MCS4 Replicon: chromosome
Accession: NZ_CP089313 Location: 857366..868693 Organism: Salmonella enterica subsp. enterica serovar Indiana strain YZ21MCS4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LT987_RS04180 (852812) | 852812..853910 | + | 1099 | WP_010989230.1 | peptide chain release factor 2 | - |
| LT987_RS04185 (853920) | 853920..855437 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| LT987_RS04190 (855513) | 855513..856058 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| LT987_RS04195 (856323) | 856323..857081 | + | 759 | WP_000244318.1 | amidase activator ActS | - |
| LT987_RS04205 (857366) | 857366..858172 | - | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| LT987_RS04210 (858447) | 858447..858707 | - | 261 | WP_023227725.1 | hypothetical protein | - |
| LT987_RS04215 (858875) | 858875..859102 | + | 228 | WP_000557545.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LT987_RS04220 (859102) | 859102..859500 | + | 399 | WP_000911337.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LT987_RS04225 (860304) | 860304..860840 | + | 537 | WP_023227726.1 | Attachment invasion locus protein | VF |
| LT987_RS04230 (860887) | 860887..861519 | + | 633 | WP_023227727.1 | YfdX family protein | - |
| LT987_RS04235 (862238) | 862238..862825 | + | 588 | WP_023227728.1 | putative fimbrial-like protein YbgD | VF |
| LT987_RS04240 (862945) | 862945..865434 | + | 2490 | WP_064441659.1 | Outer membrane usher protein PapC | VF |
| LT987_RS04245 (865475) | 865475..866218 | + | 744 | WP_000798491.1 | Chaperone protein PapD | VF |
| LT987_RS04250 (866215) | 866215..867291 | + | 1077 | WP_023227730.1 | fimbrial OM outer membrane protein | - |
| LT987_RS04255 (867436) | 867436..867948 | + | 513 | WP_000336260.1 | CaiF/GrlA family transcriptional regulator | - |
| LT987_RS04260 (867935) | 867935..868693 | + | 759 | WP_023227731.1 | hypothetical protein | - |
| LT987_RS04265 (868903) | 868903..869787 | - | 885 | WP_053505586.1 | nickel/cobalt efflux protein RcnA | - |
| LT987_RS04270 (869909) | 869909..870181 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| LT987_RS04275 (870212) | 870212..871441 | - | 1230 | WP_000036841.1 | amino acid permease | - |
| LT987_RS04280 (871583) | 871583..872038 | - | 456 | WP_232389671.1 | multidrug/biocide efflux PACE transporter | - |
| LT987_RS04285 (872142) | 872142..873005 | + | 864 | WP_023227733.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|