MGE detailed information
MGE type: Genomic_island MGE length: 48245 bp
Accession: NZ_CP089313 Location: 1195834..1244078 Organism: Salmonella enterica subsp. enterica serovar Indiana strain YZ21MCS4 Replicon: chromosome
Accession: NZ_CP089313 Location: 1195834..1244078 Organism: Salmonella enterica subsp. enterica serovar Indiana strain YZ21MCS4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LT987_RS05880 (1192686) | 1192686..1193801 | - | 1116 | WP_023226811.1 | salmochelin biosynthesis C-glycosyltransferase IroB | - |
| LT987_RS05885 (1194346) | 1194346..1195050 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| LT987_RS05890 (1195194) | 1195194..1195748 | + | 555 | WP_063840321.1 | fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5 | - |
| LT987_RS05895 (1195879) | 1195879..1196709 | + | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| LT987_RS05900 (1196847) | 1196847..1197479 | + | 633 | WP_000186237.1 | Chloramphenicol acetyltransferase | VF |
| LT987_RS05905 (1197564) | 1197564..1198016 | + | 453 | WP_001749986.1 | hypothetical protein | ARG |
| LT987_RS05910 (1198239) | 1198239..1198586 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| LT987_RS05915 (1198580) | 1198580..1199419 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| LT987_RS05920 (1199547) | 1199547..1199750 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| LT987_RS05925 (1199868) | 1199868..1200572 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LT987_RS05930 (1200638) | 1200638..1202152 | + | 1515 | Protein_1163 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LT987_RS05935 (1202210) | 1202210..1202451 | + | 242 | Protein_1164 | relaxase | - |
| LT987_RS05940 (1202483) | 1202483..1203133 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| LT987_RS05945 (1203239) | 1203239..1204438 | + | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| LT987_RS05950 (1204470) | 1204470..1205354 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| LT987_RS05955 (1205492) | 1205492..1205884 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| LT987_RS05960 (1205888) | 1205888..1207639 | + | 1752 | Protein_1169 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LT987_RS05965 (1207713) | 1207713..1208099 | + | 387 | WP_181728339.1 | hypothetical protein | - |
| LT987_RS05970 (1208266) | 1208266..1208793 | + | 528 | WP_001027750.1 | hypothetical protein | - |
| LT987_RS05975 (1208844) | 1208844..1209251 | - | 408 | WP_000074418.1 | hypothetical protein | - |
| LT987_RS05980 (1209281) | 1209281..1209742 | - | 462 | WP_000185304.1 | hypothetical protein | - |
| LT987_RS05985 (1210079) | 1210079..1210276 | - | 198 | WP_000710701.1 | hypothetical protein | - |
| LT987_RS05990 (1210971) | 1210971..1211378 | - | 408 | WP_001572392.1 | hypothetical protein | - |
| LT987_RS05995 (1211426) | 1211426..1212322 | - | 897 | WP_000975182.1 | hypothetical protein | - |
| LT987_RS06000 (1212325) | 1212325..1212840 | - | 516 | WP_001572389.1 | thermonuclease family protein | - |
| LT987_RS06005 (1213055) | 1213055..1214482 | + | 1428 | WP_000833382.1 | DNA cytosine methyltransferase | - |
| LT987_RS06010 (1214543) | 1214543..1214710 | + | 168 | WP_000220758.1 | hypothetical protein | - |
| LT987_RS06015 (1214733) | 1214733..1216052 | + | 1320 | WP_000078514.1 | DUF1173 family protein | - |
| LT987_RS06020 (1216332) | 1216332..1217537 | - | 1206 | WP_001572381.1 | hypothetical protein | - |
| LT987_RS06025 (1217534) | 1217534..1218352 | - | 819 | WP_000193209.1 | DUF4942 domain-containing protein | - |
| LT987_RS06030 (1218995) | 1218995..1219375 | + | 381 | WP_001426317.1 | hypothetical protein | - |
| LT987_RS06035 (1219433) | 1219433..1220098 | + | 666 | WP_000490638.1 | hypothetical protein | - |
| LT987_RS06040 (1220158) | 1220158..1220613 | + | 456 | WP_001572344.1 | hypothetical protein | - |
| LT987_RS06045 (1220655) | 1220655..1220891 | + | 237 | WP_000175476.1 | hypothetical protein | - |
| LT987_RS06050 (1221389) | 1221389..1221793 | + | 405 | WP_001287392.1 | H-NS family nucleoid-associated regulatory protein | - |
| LT987_RS06055 (1222135) | 1222135..1222338 | - | 204 | WP_001194555.1 | hypothetical protein | - |
| LT987_RS06060 (1222400) | 1222400..1222738 | - | 339 | WP_223231361.1 | HNH endonuclease signature motif containing protein | - |
| LT987_RS06065 (1223501) | 1223501..1224355 | + | 855 | WP_074149649.1 | hypothetical protein | - |
| LT987_RS06070 (1224352) | 1224352..1226391 | + | 2040 | WP_032192809.1 | ATP-dependent helicase | - |
| LT987_RS06075 (1226704) | 1226704..1227003 | - | 300 | WP_001572440.1 | hypothetical protein | - |
| LT987_RS06080 (1227058) | 1227058..1227294 | - | 237 | Protein_1193 | type I restriction-modification system subunit M N-terminal domain-containing protein | - |
| LT987_RS06085 (1227752) | 1227752..1228177 | - | 426 | WP_001043843.1 | hypothetical protein | - |
| LT987_RS06090 (1228431) | 1228431..1229246 | - | 816 | WP_001572439.1 | HNH endonuclease signature motif containing protein | - |
| LT987_RS06095 (1229259) | 1229259..1229669 | - | 411 | WP_000985911.1 | hypothetical protein | - |
| LT987_RS06100 (1229771) | 1229771..1229977 | - | 207 | WP_000134171.1 | hypothetical protein | - |
| LT987_RS06105 (1230038) | 1230038..1231363 | - | 1326 | WP_000088046.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| LT987_RS06110 (1231368) | 1231368..1231661 | - | 294 | WP_024136327.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| LT987_RS06115 (1232265) | 1232265..1232657 | - | 393 | WP_000341066.1 | hypothetical protein | - |
| LT987_RS06120 (1233030) | 1233030..1233374 | + | 345 | WP_223572079.1 | hypothetical protein | - |
| LT987_RS06125 (1233421) | 1233421..1234125 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| LT987_RS06130 (1234214) | 1234214..1234786 | - | 573 | WP_000190920.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| LT987_RS06135 (1234878) | 1234878..1236398 | + | 1521 | WP_000079792.1 | Flagellin | VF |
| LT987_RS06140 (1236466) | 1236466..1237005 | + | 540 | WP_023226812.1 | phase 1 flagellin gene repressor FljA | - |
| LT987_RS06145 (1237355) | 1237355..1237762 | + | 408 | WP_023226814.1 | 3'-5' exonuclease | - |
| LT987_RS06150 (1237825) | 1237825..1239702 | + | 1878 | WP_023226815.1 | P-loop NTPase fold protein | - |
| LT987_RS06155 (1239702) | 1239702..1240511 | + | 810 | WP_023193100.1 | hypothetical protein | - |
| LT987_RS06160 (1240508) | 1240508..1241773 | + | 1266 | WP_023226816.1 | hypothetical protein | - |
| LT987_RS06165 (1241770) | 1241770..1242528 | + | 759 | WP_023193101.1 | TatD family hydrolase | - |
| LT987_RS06170 (1242776) | 1242776..1243690 | + | 915 | WP_020839148.1 | hypothetical protein | - |
| LT987_RS06175 (1243848) | 1243848..1244078 | - | 231 | WP_020839149.1 | IS256 family transposase IS285 | Transposase |
| LT987_RS06185 (1244702) | 1244702..1245865 | - | 1164 | WP_072101449.1 | HlyD family type I secretion periplasmic adaptor subunit | - |
| LT987_RS06190 (1245873) | 1245873..1248052 | - | 2180 | Protein_1214 | type I secretion system permease/ATPase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|