MGE detailed information
MGE type: Genomic_island MGE length: 21282 bp
Accession: NZ_CP089309 Location: 1723838..1745119 Organism: Thiocapsa bogorovii strain BBS Replicon: chromosome
Accession: NZ_CP089309 Location: 1723838..1745119 Organism: Thiocapsa bogorovii strain BBS Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LT988_RS07825 (LT988_07825) | 1719758..1719925 | + | 168 | WP_232409617.1 | hypothetical protein | - |
| LT988_RS07830 (LT988_07830) | 1719925..1720317 | + | 393 | WP_232409618.1 | hypothetical protein | - |
| LT988_RS07835 (LT988_07835) | 1720418..1722172 | - | 1755 | WP_232409619.1 | glycosidase | - |
| LT988_RS07840 (LT988_07840) | 1723054..1723992 | + | 939 | WP_232409620.1 | sulfotransferase | - |
| LT988_RS07845 (LT988_07845) | 1724928..1726364 | - | 1437 | WP_232409621.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| LT988_RS07850 (LT988_07850) | 1726546..1727238 | + | 693 | WP_232409622.1 | hypothetical protein | - |
| LT988_RS07855 (LT988_07855) | 1727255..1727491 | + | 237 | WP_232409623.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| LT988_RS07860 (LT988_07860) | 1727657..1728094 | - | 438 | WP_232409624.1 | DUF29 domain-containing protein | - |
| LT988_RS07865 (LT988_07865) | 1728215..1728346 | - | 132 | WP_232410533.1 | helix-turn-helix domain-containing protein | - |
| LT988_RS07870 (LT988_07870) | 1728421..1728735 | - | 315 | Protein_1562 | transposase | - |
| LT988_RS07875 (LT988_07875) | 1728761..1729108 | - | 348 | WP_232409625.1 | DUF5615 family PIN-like protein | Toxin Detail |
| LT988_RS07880 (LT988_07880) | 1729105..1729335 | - | 231 | WP_232409626.1 | DUF433 domain-containing protein | Antitoxin Detail |
| LT988_RS07885 (LT988_07885) | 1729669..1729854 | - | 186 | WP_232409627.1 | hypothetical protein | - |
| LT988_RS07890 (LT988_07890) | 1730239..1730487 | + | 249 | WP_232409628.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| LT988_RS07895 (LT988_07895) | 1730484..1730903 | + | 420 | WP_232409629.1 | PIN domain-containing protein | - |
| LT988_RS07900 (LT988_07900) | 1731170..1731376 | + | 207 | WP_232409630.1 | hypothetical protein | - |
| LT988_RS07905 (LT988_07905) | 1731373..1731627 | + | 255 | WP_232409631.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LT988_RS07910 (LT988_07910) | 1732251..1733294 | - | 1044 | WP_232409632.1 | hypothetical protein | - |
| LT988_RS07915 (LT988_07915) | 1733990..1734766 | - | 777 | WP_232409633.1 | hypothetical protein | - |
| LT988_RS07920 (LT988_07920) | 1735299..1736540 | + | 1242 | WP_232409634.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LT988_RS07925 (LT988_07925) | 1736537..1737463 | + | 927 | WP_232409635.1 | Tyrosine recombinase XerC | VF |
| LT988_RS07930 (LT988_07930) | 1737460..1738461 | + | 1002 | WP_232409636.1 | Tyrosine recombinase XerC | VF |
| LT988_RS07935 (LT988_07935) | 1738350..1740125 | - | 1776 | WP_232410534.1 | IS66 family transposase ISPpu15 | Transposase |
| LT988_RS07940 (LT988_07940) | 1740174..1740527 | - | 354 | WP_269752113.1 | IS66 family transposase ISVme1 | Transposase |
| LT988_RS07945 (LT988_07945) | 1740524..1740883 | - | 360 | WP_232409638.1 | IS66 family transposase ISBlma9 | Transposase |
| LT988_RS07950 (LT988_07950) | 1741278..1741463 | - | 186 | WP_232409639.1 | hypothetical protein | - |
| LT988_RS07955 (LT988_07955) | 1741478..1742230 | - | 753 | WP_232409640.1 | DUF4760 domain-containing protein | - |
| LT988_RS07960 (LT988_07960) | 1742358..1742672 | - | 315 | WP_232409641.1 | hypothetical protein | - |
| LT988_RS07965 (LT988_07965) | 1743207..1744055 | - | 849 | WP_232409642.1 | NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase | - |
| LT988_RS07970 (LT988_07970) | 1744235..1745119 | + | 885 | WP_232409643.1 | nitrogenase iron protein | - |
| LT988_RS07975 (LT988_07975) | 1745430..1746914 | + | 1485 | WP_232409644.1 | nitrogenase molybdenum-iron protein alpha chain | - |
| LT988_RS07980 (LT988_07980) | 1747051..1748622 | + | 1572 | WP_232409645.1 | nitrogenase molybdenum-iron protein subunit beta | - |
| LT988_RS07985 (LT988_07985) | 1748839..1749057 | + | 219 | WP_232409646.1 | putative nitrogen fixation protein NifT | - |
| LT988_RS07990 (LT988_07990) | 1749072..1749272 | + | 201 | WP_232409647.1 | 4Fe-4S binding protein | - |
| LT988_RS07995 (LT988_07995) | 1749369..1750076 | + | 708 | WP_232409648.1 | dinitrogenase iron-molybdenum cofactor biosynthesis protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|