MGE detailed information
MGE type: Genomic_island MGE length: 66683 bp
Accession: NZ_CP089304 Location: 3277523..3344205 Organism: Pseudomonas sp. NIBR-H-19 Replicon: chromosome
Accession: NZ_CP089304 Location: 3277523..3344205 Organism: Pseudomonas sp. NIBR-H-19 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LS633_RS15085 (LS633_15085) | 3273048..3274067 | + | 1020 | WP_210702573.1 | Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein | - |
| LS633_RS15090 (LS633_15090) | 3274228..3274467 | - | 240 | Protein_2959 | YebG family protein | - |
| LS633_RS15095 (LS633_15095) | 3274794..3275036 | + | 243 | Protein_2960 | phosphate-starvation-inducible protein PsiE | - |
| LS633_RS15100 (LS633_15100) | 3275179..3275628 | + | 450 | WP_095035871.1 | phosphate-starvation-inducible PsiE family protein | - |
| LS633_RS15105 (LS633_15105) | 3275783..3276664 | + | 882 | WP_232391451.1 | hypothetical protein | - |
| LS633_RS15110 (LS633_15110) | 3277523..3277849 | + | 327 | WP_153436109.1 | hypothetical protein | - |
| LS633_RS15115 (LS633_15115) | 3277900..3278412 | + | 513 | WP_153436108.1 | hypothetical protein | - |
| LS633_RS15120 (LS633_15120) | 3278916..3279392 | + | 477 | WP_232391452.1 | hypothetical protein | - |
| LS633_RS15125 (LS633_15125) | 3279389..3280258 | + | 870 | WP_232391453.1 | hypothetical protein | - |
| LS633_RS15130 (LS633_15130) | 3280327..3280746 | + | 420 | WP_095035875.1 | hypothetical protein | - |
| LS633_RS15135 (LS633_15135) | 3280975..3281382 | + | 408 | WP_232391454.1 | hypothetical protein | - |
| LS633_RS15140 (LS633_15140) | 3281454..3284528 | + | 3075 | WP_232391455.1 | hypothetical protein | - |
| LS633_RS15145 (LS633_15145) | 3284721..3285851 | - | 1131 | WP_141232569.1 | zincin-like metallopeptidase domain-containing protein | - |
| LS633_RS15150 (LS633_15150) | 3285889..3286395 | - | 507 | WP_095035880.1 | hypothetical protein | - |
| LS633_RS15155 (LS633_15155) | 3286450..3286974 | - | 525 | WP_095035881.1 | hypothetical protein | - |
| LS633_RS15160 (LS633_15160) | 3286971..3287498 | - | 528 | WP_095035882.1 | hypothetical protein | - |
| LS633_RS15165 (LS633_15165) | 3287567..3290110 | - | 2544 | WP_232391456.1 | hypothetical protein | - |
| LS633_RS15170 (LS633_15170) | 3290161..3292932 | - | 2772 | WP_232391457.1 | hypothetical protein | - |
| LS633_RS15175 (LS633_15175) | 3293187..3293645 | + | 459 | WP_232391458.1 | hypothetical protein | - |
| LS633_RS15180 (LS633_15180) | 3294106..3294513 | + | 408 | WP_095035885.1 | hypothetical protein | - |
| LS633_RS15185 (LS633_15185) | 3294846..3295865 | + | 1020 | WP_153404196.1 | DNA adenine methylase | - |
| LS633_RS15190 (LS633_15190) | 3295925..3296287 | + | 363 | WP_095035886.1 | hypothetical protein | - |
| LS633_RS15195 (LS633_15195) | 3296510..3297523 | + | 1014 | WP_095035887.1 | DNA adenine methylase | - |
| LS633_RS15200 (LS633_15200) | 3297583..3297945 | + | 363 | WP_141232571.1 | hypothetical protein | - |
| LS633_RS15205 (LS633_15205) | 3298079..3298510 | + | 432 | WP_232391459.1 | hypothetical protein | - |
| LS633_RS15210 (LS633_15210) | 3298606..3299208 | + | 603 | WP_232391460.1 | hypothetical protein | - |
| LS633_RS15215 (LS633_15215) | 3299409..3300242 | + | 834 | WP_232391461.1 | hypothetical protein | - |
| LS633_RS15220 (LS633_15220) | 3300277..3300558 | - | 282 | WP_146425889.1 | putative addiction module antidote protein | Antitoxin Detail |
| LS633_RS15225 (LS633_15225) | 3300555..3300863 | - | 309 | WP_095035893.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LS633_RS15230 (LS633_15230) | 3300919..3301266 | - | 348 | WP_232391462.1 | hypothetical protein | - |
| LS633_RS15235 (LS633_15235) | 3301412..3302119 | - | 708 | WP_232391463.1 | hypothetical protein | - |
| LS633_RS15240 (LS633_15240) | 3302280..3302996 | - | 717 | WP_120266248.1 | hypothetical protein | - |
| LS633_RS15245 (LS633_15245) | 3303131..3304597 | + | 1467 | WP_162939346.1 | hypothetical protein | - |
| LS633_RS15250 (LS633_15250) | 3304594..3305310 | + | 717 | WP_120266246.1 | hypothetical protein | - |
| LS633_RS15255 (LS633_15255) | 3305318..3305953 | - | 636 | WP_232391464.1 | hypothetical protein | - |
| LS633_RS15260 (LS633_15260) | 3305957..3306391 | - | 435 | WP_232391465.1 | hypothetical protein | - |
| LS633_RS15265 (LS633_15265) | 3306419..3307222 | - | 804 | WP_232391466.1 | hypothetical protein | - |
| LS633_RS15270 (LS633_15270) | 3307299..3308414 | + | 1116 | WP_232391467.1 | hypothetical protein | - |
| LS633_RS15275 (LS633_15275) | 3308464..3309255 | - | 792 | WP_232391468.1 | hypothetical protein | - |
| LS633_RS15280 (LS633_15280) | 3309333..3309611 | + | 279 | WP_232391469.1 | hypothetical protein | - |
| LS633_RS15285 (LS633_15285) | 3309608..3309853 | + | 246 | WP_095035903.1 | hypothetical protein | - |
| LS633_RS15290 (LS633_15290) | 3309946..3310275 | + | 330 | WP_095030231.1 | hypothetical protein | - |
| LS633_RS15295 (LS633_15295) | 3310456..3311187 | + | 732 | WP_232391470.1 | hypothetical protein | - |
| LS633_RS15300 (LS633_15300) | 3311262..3311582 | + | 321 | WP_146425916.1 | hypothetical protein | - |
| LS633_RS15305 (LS633_15305) | 3311640..3312455 | + | 816 | WP_232391471.1 | hypothetical protein | - |
| LS633_RS15310 (LS633_15310) | 3312494..3314794 | - | 2301 | WP_232391472.1 | hypothetical protein | - |
| LS633_RS15315 (LS633_15315) | 3314810..3315643 | - | 834 | WP_232391473.1 | hypothetical protein | - |
| LS633_RS15320 (LS633_15320) | 3315652..3316116 | - | 465 | WP_232391474.1 | hypothetical protein | - |
| LS633_RS15325 (LS633_15325) | 3316562..3317260 | + | 699 | WP_232391475.1 | hypothetical protein | - |
| LS633_RS15330 (LS633_15330) | 3317435..3318577 | + | 1143 | WP_232391476.1 | hypothetical protein | - |
| LS633_RS15335 (LS633_15335) | 3318645..3318881 | + | 237 | WP_232391477.1 | hypothetical protein | - |
| LS633_RS15340 (LS633_15340) | 3318925..3319266 | - | 342 | WP_153404145.1 | hypothetical protein | - |
| LS633_RS15345 (LS633_15345) | 3319535..3319975 | + | 441 | WP_232391478.1 | hypothetical protein | - |
| LS633_RS15350 (LS633_15350) | 3320689..3323727 | + | 3039 | WP_232391479.1 | hypothetical protein | - |
| LS633_RS15355 (LS633_15355) | 3323912..3324133 | + | 222 | WP_232391480.1 | hypothetical protein | - |
| LS633_RS15360 (LS633_15360) | 3324444..3324872 | + | 429 | WP_232391481.1 | hypothetical protein | - |
| LS633_RS15365 (LS633_15365) | 3324906..3325211 | - | 306 | WP_131652523.1 | hypothetical protein | - |
| LS633_RS15370 (LS633_15370) | 3325577..3326104 | - | 528 | WP_232391482.1 | hypothetical protein | - |
| LS633_RS15375 (LS633_15375) | 3326273..3326557 | - | 285 | WP_095035919.1 | hypothetical protein | - |
| LS633_RS15380 (LS633_15380) | 3326668..3327018 | - | 351 | WP_095035920.1 | hypothetical protein | - |
| LS633_RS15385 (LS633_15385) | 3327098..3327982 | - | 885 | WP_095035921.1 | hypothetical protein | - |
| LS633_RS15390 (LS633_15390) | 3328120..3328299 | - | 180 | WP_141232582.1 | hypothetical protein | - |
| LS633_RS15395 (LS633_15395) | 3328349..3328765 | - | 417 | WP_232391483.1 | hypothetical protein | - |
| LS633_RS15400 (LS633_15400) | 3328762..3329307 | - | 546 | WP_232391484.1 | hypothetical protein | - |
| LS633_RS15405 (LS633_15405) | 3329383..3329706 | - | 324 | WP_153377148.1 | hypothetical protein | - |
| LS633_RS15410 (LS633_15410) | 3329871..3330185 | + | 315 | WP_232391485.1 | helix-turn-helix transcriptional regulator | - |
| LS633_RS15415 (LS633_15415) | 3330337..3330768 | + | 432 | WP_232391486.1 | S24 family peptidase | - |
| LS633_RS15420 (LS633_15420) | 3330768..3332054 | + | 1287 | WP_232391487.1 | Y-family DNA polymerase | - |
| LS633_RS15425 (LS633_15425) | 3332242..3334629 | + | 2388 | WP_232391488.1 | hypothetical protein | - |
| LS633_RS15430 (LS633_15430) | 3334788..3337157 | + | 2370 | WP_232391489.1 | hypothetical protein | - |
| LS633_RS15435 (LS633_15435) | 3337262..3337870 | + | 609 | WP_232391490.1 | hypothetical protein | - |
| LS633_RS15440 (LS633_15440) | 3338896..3339174 | - | 279 | WP_232391491.1 | hypothetical protein | - |
| LS633_RS15445 (LS633_15445) | 3339448..3339879 | - | 432 | WP_232391492.1 | hypothetical protein | - |
| LS633_RS15450 (LS633_15450) | 3339895..3340923 | - | 1029 | WP_095036830.1 | AAA family ATPase | - |
| LS633_RS15455 (LS633_15455) | 3341233..3341721 | - | 489 | WP_095036829.1 | hypothetical protein | - |
| LS633_RS15460 (LS633_15460) | 3341821..3342336 | + | 516 | WP_232391493.1 | hypothetical protein | - |
| LS633_RS15465 (LS633_15465) | 3342460..3344205 | - | 1746 | WP_232391494.1 | hypothetical protein ; Integrase | Integrase |
| LS633_RS15470 (LS633_15470) | 3344245..3344511 | + | 267 | Protein_3035 | phosphate-starvation-inducible PsiE family protein | - |
| LS633_RS15475 (LS633_15475) | 3344508..3344825 | - | 318 | WP_047299804.1 | DUF3509 domain-containing protein | - |
| LS633_RS15480 (LS633_15480) | 3345069..3346445 | - | 1377 | WP_210702571.1 | L-serine ammonia-lyase | - |
| LS633_RS15485 (LS633_15485) | 3346581..3347528 | + | 948 | WP_210702570.1 | LysR substrate-binding domain-containing protein | - |
| LS633_RS15490 (LS633_15490) | 3347729..3348133 | + | 405 | WP_150594995.1 | HPF/RaiA family ribosome-associated protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|