MGE detailed information
MGE type: Genomic_island MGE length: 54454 bp
Accession: NZ_CP089301 Location: 1151167..1205620 Organism: Novosphingobium kaempferiae strain Sx8-5 Replicon: chromosome
Accession: NZ_CP089301 Location: 1151167..1205620 Organism: Novosphingobium kaempferiae strain Sx8-5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LO787_RS05260 | 1147409..1148416 | - | 1008 | WP_232494800.1 | PD-(D/E)XK motif protein | - |
| LO787_RS05265 | 1148413..1151145 | - | 2733 | WP_232494801.1 | Z1 domain-containing protein | - |
| LO787_RS05270 | 1151167..1152687 | - | 1521 | WP_232494802.1 | ATP-binding protein | - |
| LO787_RS05275 | 1152677..1154341 | - | 1665 | WP_232494803.1 | DNA cytosine methyltransferase | - |
| LO787_RS05280 | 1154365..1154826 | + | 462 | WP_232494804.1 | DNA mismatch endonuclease Vsr | - |
| LO787_RS05285 | 1154953..1155567 | + | 615 | WP_232494805.1 | AbiEi antitoxin N-terminal domain-containing protein | Antitoxin Detail |
| LO787_RS05290 | 1155560..1156453 | + | 894 | WP_232494806.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| LO787_RS05295 | 1156450..1157754 | - | 1305 | WP_232494807.1 | hypothetical protein | - |
| LO787_RS05300 | 1157754..1159892 | - | 2139 | WP_232494808.1 | ATP-binding protein | - |
| LO787_RS05305 | 1160013..1162031 | - | 2019 | WP_232494809.1 | relaxase/mobilization nuclease RlxS | - |
| LO787_RS05310 | 1162229..1162630 | - | 402 | WP_232494810.1 | hypothetical protein | - |
| LO787_RS05315 | 1162833..1163468 | - | 636 | WP_232494811.1 | lytic transglycosylase domain-containing protein | - |
| LO787_RS05320 | 1163456..1164037 | - | 582 | WP_232494812.1 | S26 family signal peptidase | - |
| LO787_RS05325 | 1164034..1164264 | - | 231 | WP_232494813.1 | helix-turn-helix domain-containing protein | - |
| LO787_RS05330 | 1164422..1164721 | - | 300 | WP_232494814.1 | DUF736 domain-containing protein | - |
| LO787_RS05335 | 1165079..1165477 | - | 399 | Protein_1054 | DUF5990 family protein | - |
| LO787_RS05340 | 1165699..1167495 | - | 1797 | WP_232494815.1 | ParB/RepB/Spo0J family partition protein | - |
| LO787_RS05345 | 1167602..1168030 | - | 429 | WP_232494816.1 | DUF2958 domain-containing protein | - |
| LO787_RS05350 | 1168027..1169004 | - | 978 | WP_232494817.1 | zincin-like metallopeptidase domain-containing protein | - |
| LO787_RS05355 | 1169382..1169642 | - | 261 | WP_232494818.1 | hypothetical protein | - |
| LO787_RS05360 | 1169746..1169949 | + | 204 | WP_232494819.1 | hypothetical protein | VF |
| LO787_RS05365 | 1170546..1171301 | + | 756 | WP_232494820.1 | reverse transcriptase domain-containing protein | - |
| LO787_RS05370 | 1171876..1172115 | + | 240 | WP_255700841.1 | helix-turn-helix transcriptional regulator | - |
| LO787_RS05375 | 1172118..1172510 | - | 393 | WP_232494821.1 | DUF2285 domain-containing protein | - |
| LO787_RS05380 | 1172847..1173707 | - | 861 | WP_232494822.1 | phytanoyl-CoA dioxygenase family protein | - |
| LO787_RS05385 | 1173704..1174309 | - | 606 | WP_232494823.1 | hypothetical protein | VF |
| LO787_RS05390 | 1174637..1175539 | - | 903 | WP_232494824.1 | LysR family transcriptional regulator | - |
| LO787_RS05395 | 1175735..1176148 | + | 414 | WP_232494825.1 | DoxX family protein | - |
| LO787_RS05400 | 1176159..1177202 | + | 1044 | WP_232494826.1 | LLM class flavin-dependent oxidoreductase | - |
| LO787_RS05405 | 1177251..1178222 | + | 972 | WP_232494827.1 | glutathione S-transferase family protein | - |
| LO787_RS05410 | 1178487..1178675 | + | 189 | WP_232494828.1 | hypothetical protein | - |
| LO787_RS05415 | 1178820..1179095 | - | 276 | WP_232494829.1 | hypothetical protein | - |
| LO787_RS05420 | 1179302..1180027 | - | 726 | WP_232494830.1 | Crp/Fnr family transcriptional regulator | - |
| LO787_RS05425 | 1180310..1181917 | - | 1608 | WP_232494831.1 | long-chain-fatty-acid--CoA ligase | - |
| LO787_RS05430 | 1181990..1182568 | - | 579 | WP_232496266.1 | NADPH-dependent FMN reductase | - |
| LO787_RS05435 | 1182591..1183241 | - | 651 | WP_232494832.1 | maleylacetoacetate isomerase | - |
| LO787_RS05440 | 1183238..1183936 | - | 699 | WP_232494833.1 | fumarylacetoacetate hydrolase family protein | - |
| LO787_RS05445 | 1183933..1184928 | - | 996 | WP_232494834.1 | gentisate 1,2-dioxygenase | - |
| LO787_RS05450 | 1185518..1186657 | + | 1140 | WP_232494835.1 | LLM class flavin-dependent oxidoreductase | - |
| LO787_RS05455 | 1186780..1189221 | + | 2442 | WP_232494836.1 | TonB-dependent receptor | - |
| LO787_RS05460 | 1189258..1189974 | + | 717 | WP_232494837.1 | Gamma-glutamyl phosphate reductase | VF |
| LO787_RS05465 | 1190058..1190804 | - | 747 | WP_232494838.1 | Prophage integrase IntS | VF |
| LO787_RS05470 | 1190902..1191300 | - | 399 | WP_232494839.1 | cupin domain-containing protein | - |
| LO787_RS05475 | 1191604..1192923 | + | 1320 | WP_232494840.1 | Xaa-Pro peptidase family protein | - |
| LO787_RS05480 | 1192920..1193558 | + | 639 | WP_232494841.1 | glutathione S-transferase family protein | - |
| LO787_RS05485 | 1193765..1194472 | + | 708 | WP_232494842.1 | TetR/AcrR family transcriptional regulator | - |
| LO787_RS05490 | 1194469..1195548 | + | 1080 | WP_232494843.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| LO787_RS05495 | 1195622..1196401 | + | 780 | WP_232494844.1 | SDR family oxidoreductase | - |
| LO787_RS05500 | 1196621..1197706 | + | 1086 | WP_232494845.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| LO787_RS05505 | 1197798..1198523 | + | 726 | WP_232494846.1 | dienelactone hydrolase family protein | - |
| LO787_RS05510 | 1198763..1199551 | + | 789 | WP_232494847.1 | LuxR family transcriptional regulator | - |
| LO787_RS05515 | 1199592..1200350 | - | 759 | WP_232494848.1 | Glyoxal reductase | VF |
| LO787_RS05520 | 1200587..1201414 | + | 828 | WP_232494849.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| LO787_RS05525 | 1201499..1202884 | + | 1386 | WP_232494850.1 | LLM class flavin-dependent oxidoreductase | - |
| LO787_RS05530 | 1204072..1204254 | + | 183 | WP_232494851.1 | hypothetical protein | - |
| LO787_RS05535 | 1204634..1205620 | - | 987 | WP_232494852.1 | hypothetical protein | - |
| LO787_RS05540 | 1205927..1207966 | + | 2040 | WP_232494853.1 | conjugal transfer protein TraG | - |
| LO787_RS05545 | 1207969..1208373 | + | 405 | WP_232494854.1 | CopG family transcriptional regulator | - |
| LO787_RS05550 | 1208370..1209374 | + | 1005 | WP_232494855.1 | P-type conjugative transfer ATPase TrbB | - |
| LO787_RS05555 | 1209371..1209697 | + | 327 | WP_232494856.1 | TrbC/VirB2 family protein | - |
| LO787_RS05560 | 1209694..1209978 | + | 285 | WP_232494857.1 | VirB3 family type IV secretion system protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|