MGE detailed information
MGE type: IScluster/Tn MGE length: 11814 bp
Accession: NZ_CP089282 Location: 175321..187134 Organism: Pseudomonas amygdali pv. loropetali strain AAC Replicon: chromosome
Accession: NZ_CP089282 Location: 175321..187134 Organism: Pseudomonas amygdali pv. loropetali strain AAC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LT107_RS00750 (LT107_00750) | 170704..171978 | - | 1275 | WP_054071591.1 | FAD-binding oxidoreductase | - |
| LT107_RS00755 (LT107_00755) | 172045..172713 | - | 669 | WP_002555961.1 | haloacid dehalogenase type II | - |
| LT107_RS00760 (LT107_00760) | 172749..173102 | + | 354 | WP_161938530.1 | hypothetical protein | - |
| LT107_RS00765 (LT107_00765) | 173249..174106 | + | 858 | WP_054071592.1 | GNAT family N-acetyltransferase | - |
| LT107_RS00770 (LT107_00770) | 174407..175120 | + | 714 | WP_243787090.1 | cupin domain-containing protein | - |
| LT107_RS00775 (LT107_00775) | 175321..176301 | - | 981 | WP_054991743.1 | IS5 family transposase ISPsy2 | Transposase |
| LT107_RS00780 (LT107_00780) | 176381..177394 | - | 1014 | WP_248583737.1 | IS30 family transposase IS1394 | Transposase |
| LT107_RS00785 (LT107_00785) | 177455..177955 | + | 501 | WP_019332191.1 | Protein hcp1 | VF |
| LT107_RS00790 (LT107_00790) | 177979..178506 | + | 528 | WP_005747600.1 | DUF2778 domain-containing protein | - |
| LT107_RS00795 (LT107_00795) | 179115..180323 | + | 1209 | WP_248583762.1 | IS91 family transposase IS801 | Transposase |
| LT107_RS00800 (LT107_00800) | 180845..181825 | + | 981 | WP_054991743.1 | IS5 family transposase ISPsy2 | Transposase |
| LT107_RS00805 (LT107_00805) | 182891..183262 | + | 372 | Protein_159 | RHS repeat-associated core domain-containing protein | - |
| LT107_RS00810 (LT107_00810) | 183522..183872 | - | 351 | WP_096134620.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LT107_RS00815 (LT107_00815) | 183885..184133 | - | 249 | WP_057431469.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| LT107_RS00820 (LT107_00820) | 184475..185437 | + | 963 | WP_243787576.1 | IS91 family transposase ISTha3 | Transposase |
| LT107_RS00825 (LT107_00825) | 185607..185846 | - | 240 | WP_057456425.1 | hypothetical protein | - |
| LT107_RS00830 (LT107_00830) | 186151..187131 | - | 981 | WP_248583804.1 | IS5 family transposase ISPsy2 | Transposase |
| LT107_RS00835 (LT107_00835) | 187174..188172 | - | 999 | Protein_165 | RHS domain-containing protein | - |
| LT107_RS00840 (LT107_00840) | 188356..188538 | - | 183 | WP_054070926.1 | DUF6386 family protein | - |
| LT107_RS00845 (LT107_00845) | 188965..189270 | - | 306 | WP_057402436.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|