MGE detailed information
MGE type: Genomic_island MGE length: 21216 bp
Accession: NZ_CP089272 Location: 4829784..4850999 Organism: Escherichia coli O157:H7 strain M1300706001A Replicon: chromosome
Accession: NZ_CP089272 Location: 4829784..4850999 Organism: Escherichia coli O157:H7 strain M1300706001A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LSI73_RS24480 (4825510) | 4825510..4826052 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| LSI73_RS24485 (4826345) | 4826345..4828495 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| LSI73_RS24490 (4828545) | 4828545..4828748 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| LSI73_RS24495 (4828759) | 4828759..4829715 | + | 957 | WP_001297640.1 | GTPase | - |
| LSI73_RS24500 (4829784) | 4829784..4831142 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| LSI73_RS28230 (4831151) | 4831151..4831435 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| LSI73_RS24505 (4831713) | 4831713..4834145 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| LSI73_RS24510 (4834212) | 4834212..4835681 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| LSI73_RS24515 (4835681) | 4835681..4837435 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - (4837585) | 4837585..4837661 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (4837585) | 4837585..4837661 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (4837585) | 4837585..4837661 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (4837585) | 4837585..4837661 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (4837585) | 4837585..4837661 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - (4837585) | 4837585..4837661 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - (4837585) | 4837585..4837661 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - (4837585) | 4837585..4837661 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| LSI73_RS24520 (4837656) | 4837656..4837997 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| LSI73_RS24525 (4838044) | 4838044..4839207 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| LSI73_RS24530 (4839255) | 4839255..4840136 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| LSI73_RS24535 (4840279) | 4840279..4840431 | - | 153 | WP_001418365.1 | hypothetical protein | - |
| LSI73_RS24540 (4840574) | 4840574..4841986 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| LSI73_RS24545 (4842346) | 4842346..4843186 | - | 841 | Protein_4811 | Rpn family recombination-promoting nuclease/putative transposase | - |
| LSI73_RS24550 (4843653) | 4843653..4844885 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| LSI73_RS24555 (4844926) | 4844926..4846197 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| LSI73_RS24560 (4846313) | 4846313..4847464 | + | 1152 | WP_001301805.1 | double-cubane-cluster-containing anaerobic reductase | - |
| LSI73_RS24565 (4847474) | 4847474..4848241 | + | 768 | WP_000222489.1 | putative 2-hydroxyacyl-CoA dehydratase activator YjiL | - |
| LSI73_RS24570 (4848238) | 4848238..4848504 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| LSI73_RS24575 (4848816) | 4848816..4850999 | + | 2184 | WP_000535062.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| LSI73_RS24580 (4851265) | 4851265..4852107 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| LSI73_RS24585 (4852175) | 4852175..4853353 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |