MGE detailed information
MGE type: Genomic_island MGE length: 21228 bp
Accession: NZ_CP089270 Location: 4958907..4980134 Organism: Escherichia coli O157:H7 strain M1300706002 Replicon: chromosome
Accession: NZ_CP089270 Location: 4958907..4980134 Organism: Escherichia coli O157:H7 strain M1300706002 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LSI72_RS25330 (4954633) | 4954633..4955175 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| LSI72_RS25335 (4955468) | 4955468..4957618 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| LSI72_RS25340 (4957668) | 4957668..4957871 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| LSI72_RS25345 (4957882) | 4957882..4958838 | + | 957 | WP_001297640.1 | GTPase | - |
| LSI72_RS25350 (4958907) | 4958907..4960265 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| LSI72_RS28960 (4960274) | 4960274..4960558 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| LSI72_RS25355 (4960836) | 4960836..4963268 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| LSI72_RS25360 (4963335) | 4963335..4964804 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| LSI72_RS25365 (4964804) | 4964804..4966558 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - (4966708) | 4966708..4966784 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - (4966708) | 4966708..4966784 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - (4966708) | 4966708..4966784 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - (4966708) | 4966708..4966784 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - (4966708) | 4966708..4966784 | - | 77 | NuclAT_17 | - | Antitoxin Detail |
| - (4966708) | 4966708..4966784 | - | 77 | NuclAT_17 | - | Antitoxin Detail |
| - (4966708) | 4966708..4966784 | - | 77 | NuclAT_17 | - | Antitoxin Detail |
| - (4966708) | 4966708..4966784 | - | 77 | NuclAT_17 | - | Antitoxin Detail |
| LSI72_RS25370 (4966779) | 4966779..4967120 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| LSI72_RS25375 (4967167) | 4967167..4968330 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| LSI72_RS25380 (4968378) | 4968378..4969259 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| LSI72_RS25385 (4969402) | 4969402..4969554 | - | 153 | WP_001418365.1 | hypothetical protein | - |
| LSI72_RS25390 (4969697) | 4969697..4971109 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| LSI72_RS25395 (4971469) | 4971469..4972309 | - | 841 | Protein_4981 | Recombination-promoting nuclease RpnD | VF |
| LSI72_RS25400 (4972776) | 4972776..4974008 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| LSI72_RS25405 (4974049) | 4974049..4975320 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| LSI72_RS25410 (4975436) | 4975436..4976587 | + | 1152 | WP_001302771.1 | double-cubane-cluster-containing anaerobic reductase | - |
| LSI72_RS25415 (4976597) | 4976597..4977364 | + | 768 | WP_000222489.1 | putative 2-hydroxyacyl-CoA dehydratase activator YjiL | - |
| LSI72_RS25420 (4977361) | 4977361..4977627 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| LSI72_RS25425 (4977939) | 4977939..4980134 | + | 2196 | WP_000535069.1 | hypothetical protein | VF |
| LSI72_RS25430 (4980400) | 4980400..4981242 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| LSI72_RS25435 (4981310) | 4981310..4982488 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |