MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 46776 bp
Accession: NZ_CP089237 Location: 1..46776 Organism: Pseudomonas aeruginosa strain JNQH-PA027 Replicon: plasmid pPA027
Accession: NZ_CP089237 Location: 1..46776 Organism: Pseudomonas aeruginosa strain JNQH-PA027 Replicon: plasmid pPA027
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LSG40_RS33625 (LSG40_33625) | 1041..1376 | - | 336 | WP_052415162.1 | hypothetical protein | - |
| LSG40_RS33630 (LSG40_33630) | 1381..1791 | - | 411 | WP_143478382.1 | hypothetical protein | - |
| LSG40_RS33635 (LSG40_33635) | 1763..2086 | - | 324 | WP_175454325.1 | hypothetical protein | - |
| LSG40_RS33640 (LSG40_33640) | 2280..2537 | + | 258 | WP_019727096.1 | hypothetical protein | - |
| LSG40_RS33645 (LSG40_33645) | 2677..2892 | - | 216 | WP_143478381.1 | hypothetical protein | - |
| LSG40_RS33650 (LSG40_33650) | 3570..4139 | + | 570 | WP_034019136.1 | hypothetical protein | - |
| LSG40_RS33655 (LSG40_33655) | 5071..6108 | - | 1038 | WP_044069758.1 | Putative conjugal transfer protein | VF |
| LSG40_RS33660 (LSG40_33660) | 6105..6863 | - | 759 | WP_124171328.1 | hypothetical protein | - |
| LSG40_RS33665 (LSG40_33665) | 8427..8597 | + | 171 | WP_161417299.1 | hypothetical protein | - |
| LSG40_RS33670 (LSG40_33670) | 8657..10777 | + | 2121 | WP_234493637.1 | TraM recognition domain-containing protein | - |
| LSG40_RS33675 (LSG40_33675) | 10780..11589 | + | 810 | WP_023123756.1 | ParA family protein | - |
| LSG40_RS33680 (LSG40_33680) | 11586..12608 | + | 1023 | WP_234493638.1 | hypothetical protein | - |
| LSG40_RS33685 (LSG40_33685) | 12619..13050 | + | 432 | WP_019727150.1 | hypothetical protein | - |
| LSG40_RS33690 (LSG40_33690) | 13050..13658 | + | 609 | WP_234493639.1 | hypothetical protein | - |
| LSG40_RS33695 (LSG40_33695) | 13667..15484 | + | 1818 | WP_052415166.1 | type IA DNA topoisomerase | - |
| LSG40_RS33700 (LSG40_33700) | 16654..16935 | + | 282 | WP_034073728.1 | hypothetical protein | - |
| LSG40_RS33705 (LSG40_33705) | 16935..17210 | + | 276 | WP_034073726.1 | hypothetical protein | - |
| LSG40_RS33710 (LSG40_33710) | 17241..17438 | + | 198 | WP_124171326.1 | hypothetical protein | - |
| LSG40_RS33715 (LSG40_33715) | 17747..18367 | + | 621 | WP_084929138.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LSG40_RS33720 (LSG40_33720) | 18381..18581 | + | 201 | WP_023123722.1 | hypothetical protein | - |
| LSG40_RS33725 (LSG40_33725) | 18638..18997 | - | 360 | WP_234493640.1 | hypothetical protein | - |
| LSG40_RS33730 (LSG40_33730) | 19542..19865 | - | 324 | WP_031655071.1 | hypothetical protein | - |
| LSG40_RS33735 (LSG40_33735) | 19896..21995 | - | 2100 | WP_234493641.1 | ParB/RepB/Spo0J family partition protein | - |
| LSG40_RS33740 (LSG40_33740) | 22342..22605 | - | 264 | WP_084929135.1 | hypothetical protein | - |
| LSG40_RS33745 (LSG40_33745) | 22619..22891 | - | 273 | WP_084929133.1 | hypothetical protein | - |
| LSG40_RS33750 (LSG40_33750) | 22888..23139 | - | 252 | WP_058159039.1 | hypothetical protein | - |
| LSG40_RS33755 (LSG40_33755) | 23292..23450 | + | 159 | WP_234493642.1 | hypothetical protein | - |
| LSG40_RS33760 (LSG40_33760) | 23501..23749 | - | 249 | WP_033992320.1 | hypothetical protein | - |
| LSG40_RS33765 (LSG40_33765) | 24368..24676 | - | 309 | WP_058159041.1 | TrfB-related DNA-binding protein | - |
| LSG40_RS33770 (LSG40_33770) | 25000..25293 | - | 294 | WP_033992327.1 | hypothetical protein | - |
| LSG40_RS33775 (LSG40_33775) | 25354..25740 | - | 387 | WP_034019111.1 | hypothetical protein | - |
| LSG40_RS33780 (LSG40_33780) | 26014..26289 | + | 276 | WP_019727126.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| LSG40_RS33785 (LSG40_33785) | 26289..26564 | + | 276 | WP_034019113.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LSG40_RS33790 (LSG40_33790) | 26567..26830 | + | 264 | WP_172405635.1 | hypothetical protein | - |
| LSG40_RS33795 (LSG40_33795) | 27702..28022 | - | 321 | WP_034019116.1 | hypothetical protein | - |
| LSG40_RS33800 (LSG40_33800) | 28042..28464 | - | 423 | WP_084929126.1 | hypothetical protein | - |
| LSG40_RS33805 (LSG40_33805) | 28469..29551 | - | 1083 | WP_084929124.1 | DNA-binding protein | - |
| LSG40_RS33810 (LSG40_33810) | 29835..30629 | - | 795 | WP_234493643.1 | DUF3560 domain-containing protein | - |
| LSG40_RS33815 (LSG40_33815) | 31661..32476 | - | 816 | WP_052153570.1 | hypothetical protein | - |
| LSG40_RS33820 (LSG40_33820) | 33134..33760 | - | 627 | WP_019727114.1 | DUF6012 family protein | - |
| LSG40_RS33825 (LSG40_33825) | 33772..36495 | - | 2724 | WP_234493636.1 | Autotransporter adhesin UpaG | VF |
| LSG40_RS33830 (LSG40_33830) | 36555..37145 | - | 591 | WP_084929155.1 | hypothetical protein | - |
| LSG40_RS33835 (LSG40_33835) | 37244..37588 | - | 345 | Protein_43 | single-stranded DNA-binding protein | - |
| LSG40_RS33840 (LSG40_33840) | 37616..38011 | - | 396 | WP_033992702.1 | hypothetical protein | - |
| LSG40_RS33845 (LSG40_33845) | 38008..38331 | - | 324 | WP_023123742.1 | hypothetical protein | - |
| LSG40_RS33850 (LSG40_33850) | 38328..39050 | - | 723 | WP_052153558.1 | lytic transglycosylase domain-containing protein | - |
| LSG40_RS33855 (LSG40_33855) | 39061..39258 | - | 198 | WP_033992705.1 | hypothetical protein | - |
| LSG40_RS33860 (LSG40_33860) | 39258..39632 | - | 375 | WP_034073804.1 | hypothetical protein | - |
| LSG40_RS33865 (LSG40_33865) | 39610..41016 | - | 1407 | WP_084929153.1 | TrbI/VirB10 family protein | - |
| LSG40_RS33870 (LSG40_33870) | 41022..41867 | - | 846 | WP_033992708.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| LSG40_RS33875 (LSG40_33875) | 41864..42652 | - | 789 | WP_033992712.1 | hypothetical protein | - |
| LSG40_RS33880 (LSG40_33880) | 42665..43783 | - | 1119 | WP_143478383.1 | hypothetical protein | - |
| LSG40_RS33885 (LSG40_33885) | 43851..44381 | - | 531 | WP_124176273.1 | hypothetical protein | - |
| LSG40_RS33890 (LSG40_33890) | 44392..45243 | - | 852 | WP_084929150.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|