MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 87365 bp
Accession: NZ_CP089236 Location: 5490395..5577759 Organism: Pseudomonas aeruginosa strain JNQH-PA027 Replicon: chromosome
Accession: NZ_CP089236 Location: 5490395..5577759 Organism: Pseudomonas aeruginosa strain JNQH-PA027 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LSG40_RS26580 (LSG40_26580) | 5485912..5490165 | + | 4254 | WP_019395747.1 | two-partner secretion system exoprotein TpsA4 | - |
| LSG40_RS26585 (LSG40_26585) | 5490536..5491402 | + | 867 | WP_023108753.1 | ParA family protein | - |
| LSG40_RS26590 (LSG40_26590) | 5491404..5492141 | + | 738 | WP_023108754.1 | hypothetical protein | - |
| LSG40_RS26595 (LSG40_26595) | 5492138..5492635 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| LSG40_RS26600 (LSG40_26600) | 5492792..5493778 | + | 987 | WP_234493602.1 | Lar family restriction alleviation protein | - |
| LSG40_RS26605 (LSG40_26605) | 5493778..5494479 | + | 702 | WP_023082648.1 | DUF2786 domain-containing protein | - |
| LSG40_RS26610 (LSG40_26610) | 5494476..5495183 | + | 708 | WP_023082649.1 | HNH endonuclease signature motif containing protein | - |
| LSG40_RS26615 (LSG40_26615) | 5495167..5495391 | + | 225 | WP_009315888.1 | hypothetical protein | - |
| LSG40_RS26620 (LSG40_26620) | 5495388..5496731 | + | 1344 | WP_023082650.1 | replicative DNA helicase | - |
| LSG40_RS26625 (LSG40_26625) | 5497170..5497616 | - | 447 | WP_003117028.1 | hypothetical protein | - |
| LSG40_RS26630 (LSG40_26630) | 5497800..5498759 | + | 960 | WP_023082651.1 | hypothetical protein | - |
| LSG40_RS26635 (LSG40_26635) | 5499166..5499351 | + | 186 | WP_042931544.1 | hypothetical protein | - |
| LSG40_RS26640 (LSG40_26640) | 5499341..5499868 | + | 528 | WP_019396658.1 | hypothetical protein | - |
| LSG40_RS26645 (LSG40_26645) | 5499865..5500122 | + | 258 | WP_004347980.1 | hypothetical protein | - |
| LSG40_RS26650 (LSG40_26650) | 5500115..5500609 | + | 495 | WP_004347979.1 | hypothetical protein | - |
| LSG40_RS26655 (LSG40_26655) | 5500602..5500835 | + | 234 | WP_004347978.1 | hypothetical protein | - |
| LSG40_RS26660 (LSG40_26660) | 5500835..5501851 | + | 1017 | WP_023098067.1 | nucleoid-associated protein YejK | - |
| LSG40_RS26665 (LSG40_26665) | 5501854..5502102 | + | 249 | WP_003111972.1 | Arc family DNA-binding protein | - |
| LSG40_RS26670 (LSG40_26670) | 5502099..5503832 | + | 1734 | WP_003448780.1 | ParB family protein | - |
| LSG40_RS26675 (LSG40_26675) | 5503860..5504615 | + | 756 | WP_003121580.1 | DUF2857 domain-containing protein | - |
| LSG40_RS26680 (LSG40_26680) | 5504618..5505943 | + | 1326 | WP_031675614.1 | STY4528 family pathogenicity island replication protein | - |
| LSG40_RS26685 (LSG40_26685) | 5505940..5510424 | + | 4485 | WP_234493603.1 | hypothetical protein | - |
| LSG40_RS26690 (LSG40_26690) | 5510690..5511418 | + | 729 | WP_003448749.1 | TIGR03761 family integrating conjugative element protein | - |
| LSG40_RS26695 (LSG40_26695) | 5511424..5511972 | + | 549 | WP_022579615.1 | DUF3158 family protein | - |
| LSG40_RS26700 (LSG40_26700) | 5512020..5512850 | + | 831 | WP_023108757.1 | Rha family transcriptional regulator | - |
| LSG40_RS26705 (LSG40_26705) | 5512880..5513368 | + | 489 | WP_022579618.1 | single-stranded DNA-binding protein | - |
| LSG40_RS26710 (LSG40_26710) | 5513518..5513829 | + | 312 | WP_022579619.1 | helix-turn-helix transcriptional regulator | - |
| LSG40_RS26715 (LSG40_26715) | 5513936..5514103 | + | 168 | WP_128729268.1 | CrpP family ICE-associated protein | - |
| LSG40_RS26720 (LSG40_26720) | 5514219..5516138 | + | 1920 | WP_022579620.1 | type I DNA topoisomerase | - |
| LSG40_RS26725 (LSG40_26725) | 5516146..5516898 | + | 753 | WP_023093669.1 | hypothetical protein | - |
| LSG40_RS26730 (LSG40_26730) | 5517212..5519107 | + | 1896 | WP_234493604.1 | hypothetical protein | - |
| LSG40_RS26735 (LSG40_26735) | 5519104..5521080 | + | 1977 | WP_042931628.1 | DEAD/DEAH box helicase | - |
| LSG40_RS33970 | 5521090..5521224 | + | 135 | WP_033179080.1 | hypothetical protein | - |
| LSG40_RS26740 (LSG40_26740) | 5521221..5521565 | + | 345 | WP_003448665.1 | hypothetical protein | - |
| LSG40_RS26745 (LSG40_26745) | 5521636..5521926 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| LSG40_RS26750 (LSG40_26750) | 5521923..5522222 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LSG40_RS26755 (LSG40_26755) | 5522424..5523545 | + | 1122 | WP_003448658.1 | hypothetical protein | VF |
| LSG40_RS26760 (LSG40_26760) | 5523545..5525254 | + | 1710 | WP_010792227.1 | Outer membrane lipoprotein BfpB | VF |
| LSG40_RS26765 (LSG40_26765) | 5525258..5526583 | + | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| LSG40_RS26770 (LSG40_26770) | 5526573..5527106 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| LSG40_RS26775 (LSG40_26775) | 5527115..5528695 | + | 1581 | WP_003099761.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| LSG40_RS26780 (LSG40_26780) | 5528695..5529774 | + | 1080 | WP_003099764.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| LSG40_RS26785 (LSG40_26785) | 5529796..5530326 | + | 531 | WP_023125177.1 | hypothetical protein | VF |
| LSG40_RS26790 (LSG40_26790) | 5530323..5531279 | + | 957 | WP_073674229.1 | ATPase, T2SS/T4P/T4SS family | - |
| LSG40_RS26795 (LSG40_26795) | 5531272..5532651 | + | 1380 | WP_042931629.1 | hypothetical protein | VF |
| LSG40_RS26800 (LSG40_26800) | 5532669..5533106 | + | 438 | WP_003120998.1 | hypothetical protein | VF |
| LSG40_RS26805 (LSG40_26805) | 5534021..5534587 | + | 567 | WP_034046424.1 | hypothetical protein | - |
| LSG40_RS26810 (LSG40_26810) | 5534664..5534843 | + | 180 | WP_004347955.1 | hypothetical protein | - |
| LSG40_RS33975 | 5534845..5534979 | + | 135 | WP_003121000.1 | hypothetical protein | - |
| LSG40_RS26815 (LSG40_26815) | 5535302..5535790 | + | 489 | WP_003448595.1 | STY4534 family ICE replication protein | - |
| LSG40_RS26820 (LSG40_26820) | 5535928..5536086 | + | 159 | WP_003121002.1 | hypothetical protein | - |
| LSG40_RS26825 (LSG40_26825) | 5536160..5536357 | + | 198 | WP_003448593.1 | hypothetical protein | - |
| LSG40_RS26830 (LSG40_26830) | 5536549..5537262 | + | 714 | WP_003121003.1 | hypothetical protein | - |
| LSG40_RS26835 (LSG40_26835) | 5537498..5537848 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| LSG40_RS26840 (LSG40_26840) | 5537905..5538537 | + | 633 | WP_003099792.1 | DUF3275 family protein | - |
| LSG40_RS26845 (LSG40_26845) | 5538534..5538809 | + | 276 | WP_003099794.1 | hypothetical protein | - |
| LSG40_RS26850 (LSG40_26850) | 5538879..5539241 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| LSG40_RS26855 (LSG40_26855) | 5539309..5539569 | + | 261 | WP_003099797.1 | hypothetical protein | - |
| LSG40_RS26860 (LSG40_26860) | 5539662..5540267 | + | 606 | WP_003099799.1 | hypothetical protein | - |
| LSG40_RS26865 (LSG40_26865) | 5540297..5541742 | + | 1446 | WP_003099801.1 | DUF6094 domain-containing protein | - |
| LSG40_RS26870 (LSG40_26870) | 5541847..5544096 | + | 2250 | WP_003099803.1 | DEAD/DEAH box helicase | - |
| LSG40_RS26875 (LSG40_26875) | 5544417..5544671 | - | 255 | WP_003099808.1 | hypothetical protein | - |
| LSG40_RS26880 (LSG40_26880) | 5544713..5544886 | + | 174 | Protein_5334 | DUF159 family protein | - |
| LSG40_RS26885 (LSG40_26885) | 5545312..5545509 | - | 198 | WP_003099811.1 | hypothetical protein | - |
| LSG40_RS26890 (LSG40_26890) | 5545727..5546425 | + | 699 | WP_023094353.1 | hypothetical protein | - |
| LSG40_RS26895 (LSG40_26895) | 5546436..5547191 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| LSG40_RS26900 (LSG40_26900) | 5547176..5547757 | + | 582 | WP_003117072.1 | hypothetical protein | VF |
| LSG40_RS26905 (LSG40_26905) | 5547754..5548254 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| LSG40_RS26910 (LSG40_26910) | 5548263..5548532 | + | 270 | WP_003099820.1 | hypothetical protein | - |
| LSG40_RS26915 (LSG40_26915) | 5548536..5550767 | + | 2232 | WP_003099821.1 | type IV conjugative transfer system coupling protein TraD | - |
| LSG40_RS26920 (LSG40_26920) | 5550767..5551513 | + | 747 | WP_003099824.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| LSG40_RS26925 (LSG40_26925) | 5551531..5552022 | + | 492 | WP_003099826.1 | hypothetical protein | - |
| LSG40_RS26930 (LSG40_26930) | 5552264..5553745 | + | 1482 | WP_003117073.1 | UvrD-helicase domain-containing protein | - |
| LSG40_RS26935 (LSG40_26935) | 5553877..5554986 | + | 1110 | WP_003121016.1 | hypothetical protein | - |
| LSG40_RS26940 (LSG40_26940) | 5555032..5555298 | - | 267 | WP_223195009.1 | DUF2845 domain-containing protein | - |
| LSG40_RS26945 (LSG40_26945) | 5555516..5555815 | + | 300 | WP_003117075.1 | hypothetical protein | - |
| LSG40_RS26950 (LSG40_26950) | 5555909..5556247 | + | 339 | WP_003158157.1 | RAQPRD family integrative conjugative element protein | - |
| LSG40_RS26955 (LSG40_26955) | 5556244..5556483 | + | 240 | WP_003121019.1 | TIGR03758 family integrating conjugative element protein | - |
| LSG40_RS26960 (LSG40_26960) | 5556501..5556857 | + | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| LSG40_RS26965 (LSG40_26965) | 5556868..5557254 | + | 387 | WP_003117078.1 | TIGR03750 family conjugal transfer protein | - |
| LSG40_RS26970 (LSG40_26970) | 5557251..5557910 | + | 660 | WP_003117079.1 | TIGR03746 family integrating conjugative element protein | - |
| LSG40_RS26975 (LSG40_26975) | 5557907..5558791 | + | 885 | WP_003121020.1 | TIGR03749 family integrating conjugative element protein | - |
| LSG40_RS26980 (LSG40_26980) | 5558775..5560280 | + | 1506 | WP_003121021.1 | TIGR03752 family integrating conjugative element protein | - |
| LSG40_RS26985 (LSG40_26985) | 5560258..5560701 | + | 444 | WP_003121022.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| LSG40_RS26990 (LSG40_26990) | 5560701..5563643 | + | 2943 | WP_010792229.1 | conjugative transfer ATPase | - |
| LSG40_RS26995 (LSG40_26995) | 5563640..5563924 | + | 285 | WP_003099860.1 | hypothetical protein | - |
| LSG40_RS27000 (LSG40_27000) | 5564269..5564919 | + | 651 | WP_202070513.1 | DsbA family protein | - |
| LSG40_RS27005 (LSG40_27005) | 5564916..5565134 | - | 219 | WP_023082680.1 | hypothetical protein | - |
| LSG40_RS27010 (LSG40_27010) | 5565343..5565774 | + | 432 | WP_023518409.1 | TIGR03757 family integrating conjugative element protein | - |
| LSG40_RS27015 (LSG40_27015) | 5565774..5566712 | + | 939 | WP_009875853.1 | TIGR03756 family integrating conjugative element protein | - |
| LSG40_RS27020 (LSG40_27020) | 5566730..5568112 | + | 1383 | WP_034069558.1 | integrating conjugative element protein | - |
| LSG40_RS27025 (LSG40_27025) | 5568112..5568459 | + | 348 | WP_202070514.1 | hypothetical protein | - |
| LSG40_RS27030 (LSG40_27030) | 5568456..5570006 | + | 1551 | WP_201890626.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| LSG40_RS27035 (LSG40_27035) | 5570050..5570418 | - | 369 | WP_234493605.1 | hypothetical protein | - |
| LSG40_RS27040 (LSG40_27040) | 5570534..5570806 | + | 273 | WP_042931634.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| LSG40_RS27045 (LSG40_27045) | 5570810..5571169 | + | 360 | WP_012076884.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LSG40_RS27050 (LSG40_27050) | 5571179..5572096 | - | 918 | WP_023082681.1 | hypothetical protein | - |
| LSG40_RS27055 (LSG40_27055) | 5572122..5572361 | - | 240 | WP_023082682.1 | hypothetical protein | - |
| LSG40_RS27060 (LSG40_27060) | 5572745..5573995 | + | 1251 | WP_234493606.1 | IS256 family transposase ISRso7 | Transposase |
| LSG40_RS27065 (LSG40_27065) | 5574155..5576077 | + | 1923 | WP_022580137.1 | MobH family relaxase | - |
| LSG40_RS27070 (LSG40_27070) | 5576074..5577375 | + | 1302 | WP_003454526.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LSG40_RS27090 (LSG40_27090) | 5578194..5580758 | - | 2565 | WP_003145976.1 | ATP-dependent chaperone ClpB | - |
| LSG40_RS27095 (LSG40_27095) | 5580914..5581642 | - | 729 | WP_003102588.1 | peptidoglycan editing factor PgeF | - |
| LSG40_RS27100 (LSG40_27100) | 5581639..5582601 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|