MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 30936 bp
Accession: NZ_CP089216 Location: 5090287..5121222 Organism: Mycobacterium kansasii strain FDAARGOS_1615 Replicon: chromosome
Accession: NZ_CP089216 Location: 5090287..5121222 Organism: Mycobacterium kansasii strain FDAARGOS_1615 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LTS70_RS22340 (LTS70_22340) | 5085332..5085661 | - | 330 | WP_225722851.1 | hypothetical protein | - |
| LTS70_RS28555 | 5085792..5085923 | + | 132 | WP_254893859.1 | hypothetical protein | - |
| LTS70_RS22345 (LTS70_22345) | 5086288..5086445 | + | 158 | Protein_4426 | site-specific integrase | - |
| LTS70_RS22350 (LTS70_22350) | 5086549..5087190 | + | 642 | WP_036393237.1 | type IV toxin-antitoxin system AbiEi family antitoxin | - |
| LTS70_RS22355 (LTS70_22355) | 5087187..5087960 | + | 774 | Protein_4428 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| LTS70_RS22360 (LTS70_22360) | 5088312..5088533 | + | 222 | WP_174893694.1 | hypothetical protein | - |
| LTS70_RS22365 (LTS70_22365) | 5088619..5088918 | + | 300 | WP_036393234.1 | nucleotidyltransferase | - |
| LTS70_RS22370 (LTS70_22370) | 5088908..5089303 | + | 396 | WP_023365494.1 | DUF86 domain-containing protein | - |
| LTS70_RS22380 (LTS70_22380) | 5090287..5091513 | - | 1227 | WP_080674197.1 | IS91 family transposase ISCARN110 | Transposase |
| LTS70_RS22385 (LTS70_22385) | 5091898..5093358 | - | 1461 | WP_036393060.1 | hypothetical protein | - |
| LTS70_RS22390 (LTS70_22390) | 5093361..5094131 | - | 771 | WP_225722910.1 | FtsK/SpoIIIE domain-containing protein | - |
| LTS70_RS22395 (LTS70_22395) | 5094349..5094777 | - | 429 | WP_023365504.1 | hypothetical protein | - |
| LTS70_RS22400 (LTS70_22400) | 5094921..5095313 | - | 393 | WP_023365506.1 | hypothetical protein | - |
| LTS70_RS22405 (LTS70_22405) | 5095493..5095903 | + | 411 | WP_023365508.1 | helix-turn-helix transcriptional regulator | - |
| LTS70_RS22410 (LTS70_22410) | 5096197..5096505 | + | 309 | WP_225722852.1 | hypothetical protein | - |
| LTS70_RS22415 (LTS70_22415) | 5096502..5097212 | + | 711 | WP_023365512.1 | hypothetical protein | - |
| LTS70_RS22420 (LTS70_22420) | 5098393..5098650 | + | 258 | WP_099184175.1 | hypothetical protein | - |
| LTS70_RS22430 (LTS70_22430) | 5100000..5100244 | - | 245 | Protein_4442 | tyrosine-type recombinase/integrase | - |
| LTS70_RS22435 (LTS70_22435) | 5101263..5101652 | - | 390 | WP_023365532.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LTS70_RS22440 (LTS70_22440) | 5101649..5101876 | - | 228 | WP_036393214.1 | hypothetical protein | Antitoxin Detail |
| LTS70_RS22445 (LTS70_22445) | 5102212..5104842 | + | 2631 | WP_023365536.1 | cation-transporting P-type ATPase | - |
| LTS70_RS22450 (LTS70_22450) | 5104887..5105114 | - | 228 | WP_023365538.1 | hypothetical protein | - |
| LTS70_RS22455 (LTS70_22455) | 5105137..5105517 | - | 381 | WP_042313314.1 | DUF732 domain-containing protein | - |
| LTS70_RS22460 (LTS70_22460) | 5105702..5107171 | - | 1470 | WP_023365542.1 | alpha-L-fucosidase | - |
| LTS70_RS22465 (LTS70_22465) | 5107382..5108161 | - | 780 | WP_225722853.1 | hypothetical protein | - |
| LTS70_RS22470 (LTS70_22470) | 5108165..5109013 | - | 849 | WP_023365544.1 | carboxymuconolactone decarboxylase family protein | - |
| LTS70_RS22475 (LTS70_22475) | 5109054..5110427 | - | 1374 | WP_023365546.1 | TldD/PmbA family protein | - |
| LTS70_RS22480 (LTS70_22480) | 5110424..5111941 | - | 1518 | WP_023365548.1 | TldD/PmbA family protein | - |
| LTS70_RS22485 (LTS70_22485) | 5111976..5112848 | + | 873 | WP_023365550.1 | sugar ABC transporter permease | - |
| LTS70_RS22490 (LTS70_22490) | 5112979..5113830 | + | 852 | WP_036393059.1 | carbohydrate ABC transporter permease | - |
| LTS70_RS22495 (LTS70_22495) | 5113910..5115238 | + | 1329 | WP_023365554.1 | sugar ABC transporter substrate-binding protein | - |
| LTS70_RS22500 (LTS70_22500) | 5115869..5116741 | - | 873 | WP_023365556.1 | universal stress protein | - |
| LTS70_RS22505 (LTS70_22505) | 5116738..5118207 | - | 1470 | WP_036393058.1 | amino acid permease | - |
| LTS70_RS22510 (LTS70_22510) | 5118308..5119168 | - | 861 | WP_023365560.1 | energy-coupling factor transporter transmembrane protein EcfT | - |
| LTS70_RS22515 (LTS70_22515) | 5119165..5121141 | - | 1977 | WP_196243231.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| LTS70_RS22520 (LTS70_22520) | 5121345..5121830 | + | 486 | WP_023365564.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| LTS70_RS22525 (LTS70_22525) | 5121913..5124366 | + | 2454 | WP_023365566.1 | ABC transporter permease | - |
| LTS70_RS22530 (LTS70_22530) | 5124380..5125126 | - | 747 | WP_023365568.1 | VIT1/CCC1 transporter family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|