MGE detailed information
MGE type: Mobilizable plasmid MGE length: 91079 bp
Accession: NZ_CP089136 Location: 1..91079 Organism: Escherichia coli strain XD35 Replicon: plasmid pXD35003
Accession: NZ_CP089136 Location: 1..91079 Organism: Escherichia coli strain XD35 Replicon: plasmid pXD35003
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K0768_RS02045 (LS330_02045) | 1..861 | + | 861 | WP_001076427.1 | replication protein RepA | - |
| K0768_RS02050 (LS330_02050) | 1261..2466 | + | 1206 | WP_000817632.1 | Plasmid partition protein A | VF |
| K0768_RS02055 (LS330_02055) | 2463..3428 | + | 966 | WP_000725192.1 | ParB family protein | - |
| K0768_RS02060 (LS330_02060) | 3693..5399 | + | 1707 | WP_033550815.1 | hypothetical protein | - |
| K0768_RS02065 (LS330_02065) | 5459..6964 | + | 1506 | Protein_4 | hypothetical protein | - |
| K0768_RS02070 (LS330_02070) | 6974..7789 | + | 816 | WP_072643636.1 | hypothetical protein | - |
| K0768_RS02075 (LS330_02075) | 7825..8406 | + | 582 | WP_000035251.1 | hypothetical protein | - |
| K0768_RS02080 (LS330_02080) | 8418..8927 | + | 510 | WP_033550818.1 | hypothetical protein | - |
| K0768_RS02085 (LS330_02085) | 9044..9199 | - | 156 | WP_001313475.1 | type I toxin-antitoxin system toxin HokD | - |
| K0768_RS02090 (LS330_02090) | 9534..9887 | - | 354 | WP_223545348.1 | replication protein RepL | - |
| K0768_RS02095 (LS330_02095) | 9878..10342 | - | 465 | WP_223545350.1 | helix-turn-helix domain-containing protein | - |
| K0768_RS02100 (LS330_02100) | 10408..11208 | - | 801 | WP_072643635.1 | phage antirepressor KilAC domain-containing protein | - |
| K0768_RS02105 (LS330_02105) | 11373..12416 | - | 1044 | WP_072643634.1 | phage antirepressor KilAC domain-containing protein | - |
| K0768_RS02110 (LS330_02110) | 12413..12634 | - | 222 | WP_016231365.1 | host cell division inhibitor Icd-like protein | - |
| K0768_RS02115 (LS330_02115) | 13215..13532 | + | 318 | WP_000908460.1 | hypothetical protein | - |
| K0768_RS02120 (LS330_02120) | 13525..14319 | + | 795 | WP_023154395.1 | hypothetical protein | - |
| K0768_RS02125 (LS330_02125) | 14529..15095 | + | 567 | WP_000188920.1 | hypothetical protein | - |
| K0768_RS02130 (LS330_02130) | 15106..15717 | + | 612 | WP_000523980.1 | hypothetical protein | - |
| K0768_RS02135 (LS330_02135) | 15732..16613 | + | 882 | WP_072643633.1 | morphogenetic protein | - |
| K0768_RS02140 (LS330_02140) | 16695..18188 | + | 1494 | Protein_19 | lytic transglycosylase domain-containing protein | - |
| K0768_RS02145 (LS330_02145) | 18253..18957 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| K0768_RS02150 (LS330_02150) | 19059..19538 | + | 480 | WP_000888203.1 | Rrf2 family transcriptional regulator | - |
| K0768_RS02155 (LS330_02155) | 19608..22760 | - | 3153 | WP_000347934.1 | Efflux pump membrane transporter BepE | VF |
| K0768_RS02160 (LS330_02160) | 22784..23959 | - | 1176 | WP_002914189.1 | Efflux pump periplasmic linker BepF | VF |
| K0768_RS02165 (LS330_02165) | 24279..24983 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| K0768_RS02170 (LS330_02170) | 25036..25236 | + | 201 | Protein_25 | DUF4111 domain-containing protein | - |
| K0768_RS02175 (LS330_02175) | 25290..25994 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| K0768_RS02180 (LS330_02180) | 26219..26422 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| K0768_RS02185 (LS330_02185) | 26550..27389 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| K0768_RS02190 (LS330_02190) | 27383..27589 | - | 207 | Protein_29 | SMR family transporter | - |
| K0768_RS02195 (LS330_02195) | 27570..27734 | + | 165 | WP_072644484.1 | cupin domain-containing protein | - |
| K0768_RS02200 (LS330_02200) | 27759..29057 | - | 1299 | Protein_31 | Tn3 family transposase TnpA_Tn3 | Transposase |
| K0768_RS02205 (LS330_02205) | 29125..29828 | + | 704 | Protein_32 | IS6 family transposase IS26 | Transposase |
| K0768_RS02210 (LS330_02210) | 30022..30408 | + | 387 | WP_063102497.1 | bleomycin binding protein | - |
| K0768_RS02215 (LS330_02215) | 30728..31120 | - | 393 | WP_057109146.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| K0768_RS02220 (LS330_02220) | 31455..32159 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| K0768_RS02225 (LS330_02225) | 32224..32637 | + | 414 | Protein_36 | Tn3 family transposase TnpR_Tn3 | Transposase |
| K0768_RS02230 (LS330_02230) | 32820..33680 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| K0768_RS02235 (LS330_02235) | 33850..34605 | + | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| K0768_RS02240 (LS330_02240) | 34731..35435 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| K0768_RS02245 (LS330_02245) | 35579..36133 | + | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| K0768_RS02250 (LS330_02250) | 36264..37094 | + | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| K0768_RS02255 (LS330_02255) | 37232..37864 | + | 633 | WP_000186237.1 | Chloramphenicol acetyltransferase | VF |
| K0768_RS02260 (LS330_02260) | 37949..38401 | + | 453 | WP_001749986.1 | hypothetical protein | ARG |
| K0768_RS02265 (LS330_02265) | 38624..38971 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| K0768_RS02270 (LS330_02270) | 38965..39804 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| K0768_RS02275 (LS330_02275) | 39932..40135 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| K0768_RS02280 (LS330_02280) | 40253..40957 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| K0768_RS02285 (LS330_02285) | 41023..42537 | + | 1515 | Protein_48 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| K0768_RS02290 (LS330_02290) | 42570..45398 | + | 2829 | Protein_49 | helicase-related protein | - |
| K0768_RS02295 (LS330_02295) | 45432..45872 | + | 441 | WP_047653052.1 | hypothetical protein | - |
| K0768_RS02300 (LS330_02300) | 45869..46117 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| K0768_RS02305 (LS330_02305) | 46157..46798 | - | 642 | WP_072643627.1 | maturation control protein | - |
| K0768_RS02310 (LS330_02310) | 46988..47548 | - | 561 | WP_072643624.1 | Ref family protein | - |
| K0768_RS02315 (LS330_02315) | 47794..48105 | - | 312 | WP_072643625.1 | lysogeny establishment protein | - |
| K0768_RS02320 (LS330_02320) | 48156..49187 | - | 1032 | WP_000067532.1 | site-specific integrase | - |
| K0768_RS02325 (LS330_02325) | 49195..49416 | - | 222 | WP_032162347.1 | hypothetical protein | - |
| K0768_RS02330 (LS330_02330) | 50053..51033 | - | 981 | Protein_57 | IS5 family transposase ISKpn26 | Transposase |
| K0768_RS02335 (LS330_02335) | 51221..51430 | + | 210 | WP_000874156.1 | hypothetical protein | - |
| K0768_RS02340 (LS330_02340) | 51541..52392 | + | 852 | WP_072643597.1 | phage repressor protein C1 | - |
| K0768_RS02345 (LS330_02345) | 52417..53901 | - | 1485 | WP_072643598.1 | terminase | - |
| K0768_RS02350 (LS330_02350) | 53901..55094 | - | 1194 | WP_054486466.1 | hypothetical protein | - |
| K0768_RS02355 (LS330_02355) | 55180..55632 | - | 453 | WP_001326849.1 | late promoter-activating protein | - |
| K0768_RS02360 (LS330_02360) | 55721..56764 | - | 1044 | WP_072643599.1 | DUF968 domain-containing protein | - |
| K0768_RS02365 (LS330_02365) | 56792..56971 | - | 180 | WP_000113018.1 | hypothetical protein | - |
| K0768_RS02370 (LS330_02370) | 56976..57356 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| K0768_RS02375 (LS330_02375) | 57356..57577 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K0768_RS02380 (LS330_02380) | 57760..59316 | + | 1557 | WP_072643605.1 | type I restriction-modification system subunit M | - |
| K0768_RS02385 (LS330_02385) | 59313..59654 | + | 342 | WP_153520317.1 | restriction endonuclease subunit S | - |
| K0768_RS02390 (LS330_02390) | 59765..60745 | - | 981 | WP_000082736.1 | IS5 family transposase ISEc68 | Transposase |
| K0768_RS02395 (LS330_02395) | 60865..61731 | + | 867 | WP_232044467.1 | restriction endonuclease subunit S | - |
| K0768_RS02400 (LS330_02400) | 61853..64969 | + | 3117 | WP_072643601.1 | HsdR family type I site-specific deoxyribonuclease | - |
| K0768_RS26860 | 65049..65183 | - | 135 | WP_257187432.1 | hypothetical protein | - |
| K0768_RS02405 (LS330_02405) | 65234..65740 | - | 507 | WP_072643602.1 | 3'-phosphatase | - |
| K0768_RS02410 (LS330_02410) | 65813..67075 | - | 1263 | WP_072643603.1 | hypothetical protein | - |
| K0768_RS02415 (LS330_02415) | 67393..68079 | - | 687 | WP_033550850.1 | hypothetical protein | - |
| K0768_RS02420 (LS330_02420) | 68076..68753 | - | 678 | WP_001567998.1 | metallophosphoesterase | - |
| K0768_RS02425 (LS330_02425) | 68750..69286 | - | 537 | WP_171961292.1 | hypothetical protein | - |
| K0768_RS02430 (LS330_02430) | 69274..69774 | - | 501 | WP_023153720.1 | hypothetical protein | - |
| K0768_RS02435 (LS330_02435) | 69878..70033 | - | 156 | WP_001567997.1 | hypothetical protein | - |
| K0768_RS02440 (LS330_02440) | 70100..70465 | - | 366 | WP_143403744.1 | VRR-NUC domain-containing protein | - |
| K0768_RS02445 (LS330_02445) | 70445..71413 | + | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| K0768_RS02450 (LS330_02450) | 71564..72190 | + | 627 | WP_032306837.1 | dimethylsulfoxide reductase subunit B | - |
| K0768_RS02455 (LS330_02455) | 72193..73020 | + | 828 | WP_033550846.1 | dimethyl sulfoxide reductase anchor subunit | - |
| K0768_RS02460 (LS330_02460) | 73059..75482 | + | 2424 | WP_042004625.1 | molybdopterin-dependent oxidoreductase | - |
| K0768_RS02465 (LS330_02465) | 75565..76212 | + | 648 | WP_042004624.1 | molecular chaperone TorD family protein | - |
| K0768_RS02470 (LS330_02470) | 76405..78072 | + | 1668 | WP_032306836.1 | energy-dependent translational throttle protein EttA | - |
| K0768_RS02475 (LS330_02475) | 78188..78472 | + | 285 | WP_029396284.1 | hypothetical protein | - |
| K0768_RS02485 (LS330_02485) | 79259..79915 | - | 657 | WP_029396361.1 | response regulator | - |
| K0768_RS02490 (LS330_02490) | 79927..81684 | - | 1758 | WP_032306943.1 | sensor histidine kinase | - |
| K0768_RS02495 (LS330_02495) | 81947..82354 | - | 408 | WP_029396360.1 | Cd(II)/Pb(II)-responsive transcriptional regulator | - |
| K0768_RS02500 (LS330_02500) | 82485..83182 | + | 698 | WP_223293343.1 | IS1-like element IS1D family transposase | - |
| K0768_RS02505 (LS330_02505) | 83176..83478 | - | 303 | WP_226244055.1 | hypothetical protein | - |
| K0768_RS02510 (LS330_02510) | 83489..84211 | - | 723 | WP_072643676.1 | hypothetical protein | - |
| K0768_RS02515 (LS330_02515) | 84208..84693 | - | 486 | WP_016236481.1 | conjugative transfer protein MobI(A/C) | - |
| K0768_RS02520 (LS330_02520) | 85676..86206 | + | 531 | WP_001352021.1 | hypothetical protein | - |
| K0768_RS02525 (LS330_02525) | 86209..86721 | + | 513 | WP_072643675.1 | hypothetical protein | - |
| K0768_RS02535 (LS330_02535) | 88054..88314 | - | 261 | Protein_99 | IS3 family transposase IS911 | Transposase |
| K0768_RS02540 (LS330_02540) | 88921..89709 | + | 789 | WP_033550813.1 | hypothetical protein | - |
| K0768_RS02545 (LS330_02545) | 89749..90171 | + | 423 | WP_001514466.1 | hypothetical protein | - |
| K0768_RS02550 (LS330_02550) | 90349..90741 | + | 393 | WP_001281116.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|