MGE detailed information
MGE type: Prophage MGE length: 47692 bp
Accession: NZ_CP089065 Location: 6075380..6123071 Organism: Pseudomonas aeruginosa strain UNC_PaerCF34 Replicon: chromosome
Accession: NZ_CP089065 Location: 6075380..6123071 Organism: Pseudomonas aeruginosa strain UNC_PaerCF34 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LSP20_RS28180 (LSP20_28185) | 6070418..6070756 | - | 339 | WP_003092856.1 | preprotein translocase subunit YajC | - |
| LSP20_RS28185 (LSP20_28190) | 6070800..6071918 | - | 1119 | WP_003100607.1 | tRNA guanosine(34) transglycosylase Tgt | - |
| LSP20_RS28190 (LSP20_28195) | 6071931..6072974 | - | 1044 | WP_003137849.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| LSP20_RS28200 (LSP20_28205) | 6073592..6074083 | + | 492 | WP_180711745.1 | DUF1543 domain-containing protein | - |
| LSP20_RS28205 (LSP20_28210) | 6074299..6074964 | + | 666 | WP_180711744.1 | M24 family metallopeptidase | - |
| LSP20_RS28210 (LSP20_28215) | 6074999..6075244 | + | 246 | Protein_5575 | gamma-glutamylcyclotransferase | - |
| LSP20_RS28215 (LSP20_28220) | 6075380..6075604 | - | 225 | WP_180711742.1 | hypothetical protein | - |
| LSP20_RS28220 (LSP20_28225) | 6075818..6077038 | + | 1221 | Protein_5577 | IS3 family transposase | - |
| LSP20_RS28225 (LSP20_28230) | 6077281..6077508 | + | 228 | WP_180711741.1 | hypothetical protein | - |
| LSP20_RS28230 (LSP20_28235) | 6077836..6078072 | - | 237 | WP_003096116.1 | hypothetical protein | - |
| LSP20_RS28235 (LSP20_28240) | 6078072..6079832 | - | 1761 | WP_231822226.1 | hypothetical protein | - |
| LSP20_RS28240 (LSP20_28245) | 6079829..6080689 | - | 861 | WP_109843836.1 | hypothetical protein | - |
| LSP20_RS28245 (LSP20_28250) | 6080686..6081687 | - | 1002 | WP_231822227.1 | hypothetical protein | - |
| LSP20_RS28250 (LSP20_28255) | 6081687..6085238 | - | 3552 | WP_231822228.1 | hypothetical protein | - |
| LSP20_RS28255 (LSP20_28260) | 6085287..6085697 | - | 411 | WP_014602841.1 | hypothetical protein | - |
| LSP20_RS28260 (LSP20_28265) | 6085694..6088966 | - | 3273 | WP_242416963.1 | tape measure protein | - |
| LSP20_RS28270 (LSP20_28280) | 6090351..6091103 | - | 753 | WP_024007846.1 | hypothetical protein | - |
| LSP20_RS28275 (LSP20_28285) | 6091131..6091331 | - | 201 | WP_019396971.1 | hypothetical protein | - |
| LSP20_RS28280 (LSP20_28290) | 6091382..6091819 | - | 438 | WP_015648938.1 | hypothetical protein | - |
| LSP20_RS28285 (LSP20_28295) | 6091816..6092127 | - | 312 | WP_231822232.1 | hypothetical protein | - |
| LSP20_RS28290 (LSP20_28300) | 6092127..6093122 | - | 996 | WP_231822233.1 | major capsid protein | - |
| LSP20_RS28295 (LSP20_28305) | 6093189..6093548 | - | 360 | WP_231822322.1 | head decoration protein | - |
| LSP20_RS28300 (LSP20_28310) | 6093548..6094744 | - | 1197 | WP_058877324.1 | Clp protease ClpP | - |
| LSP20_RS28305 (LSP20_28315) | 6094741..6096216 | - | 1476 | WP_231822234.1 | phage portal protein | - |
| LSP20_RS28310 (LSP20_28320) | 6096216..6096440 | - | 225 | WP_015648941.1 | gpW family head-tail joining protein | - |
| LSP20_RS28315 (LSP20_28325) | 6096456..6098384 | - | 1929 | WP_231822235.1 | phage terminase large subunit family protein | - |
| LSP20_RS28320 (LSP20_28330) | 6098356..6098901 | - | 546 | WP_031627904.1 | terminase small subunit | - |
| LSP20_RS28325 (LSP20_28335) | 6099116..6099853 | - | 738 | WP_231822236.1 | hypothetical protein | - |
| LSP20_RS28330 (LSP20_28340) | 6099947..6100279 | + | 333 | WP_231822237.1 | DUF883 family protein | - |
| LSP20_RS28335 (LSP20_28345) | 6100399..6100848 | - | 450 | WP_231822238.1 | lysis system i-spanin subunit Rz | - |
| LSP20_RS28340 (LSP20_28350) | 6100866..6101483 | - | 618 | WP_231822239.1 | glycoside hydrolase family 19 protein | - |
| LSP20_RS28345 (LSP20_28355) | 6101480..6101812 | - | 333 | WP_231822240.1 | phage holin, lambda family | - |
| LSP20_RS28350 (LSP20_28360) | 6101998..6102222 | - | 225 | WP_124126739.1 | hypothetical protein | - |
| LSP20_RS28355 (LSP20_28365) | 6103140..6103529 | - | 390 | WP_004353175.1 | antiterminator Q family protein | - |
| LSP20_RS28360 (LSP20_28370) | 6103526..6103804 | - | 279 | WP_231822241.1 | hypothetical protein | - |
| LSP20_RS28365 (LSP20_28375) | 6103801..6105198 | - | 1398 | WP_023086961.1 | DnaB-like helicase C-terminal domain-containing protein | - |
| LSP20_RS28370 (LSP20_28380) | 6105195..6106010 | - | 816 | WP_242416965.1 | ATP-binding protein | - |
| LSP20_RS28375 (LSP20_28385) | 6105991..6106830 | - | 840 | WP_023086959.1 | helix-turn-helix domain-containing protein | - |
| LSP20_RS28380 (LSP20_28390) | 6106827..6107057 | - | 231 | WP_023086958.1 | hypothetical protein | - |
| LSP20_RS28385 (LSP20_28395) | 6107054..6107362 | - | 309 | WP_023086957.1 | hypothetical protein | - |
| LSP20_RS28390 (LSP20_28400) | 6107359..6108153 | - | 795 | WP_063854945.1 | hypothetical protein | - |
| LSP20_RS28395 (LSP20_28405) | 6108150..6108641 | - | 492 | WP_231822244.1 | hypothetical protein | - |
| LSP20_RS28400 (LSP20_28410) | 6108638..6108883 | - | 246 | WP_231822245.1 | hypothetical protein | - |
| LSP20_RS28405 (LSP20_28415) | 6108880..6109185 | - | 306 | WP_231822246.1 | hypothetical protein | - |
| LSP20_RS28410 (LSP20_28420) | 6109182..6109460 | - | 279 | WP_019396627.1 | hypothetical protein | - |
| LSP20_RS28415 (LSP20_28425) | 6109457..6109807 | - | 351 | WP_015980934.1 | hypothetical protein | - |
| LSP20_RS28420 (LSP20_28430) | 6109993..6110244 | + | 252 | WP_031685415.1 | hypothetical protein | - |
| LSP20_RS28425 (LSP20_28435) | 6110338..6110526 | - | 189 | WP_231822247.1 | hypothetical protein | - |
| LSP20_RS28430 (LSP20_28440) | 6110562..6110762 | - | 201 | WP_231822248.1 | Cro/CI family transcriptional regulator | - |
| LSP20_RS28435 (LSP20_28445) | 6110742..6111332 | + | 591 | WP_231822249.1 | helix-turn-helix transcriptional regulator | - |
| LSP20_RS28440 (LSP20_28450) | 6111310..6111780 | + | 471 | WP_231822250.1 | hypothetical protein | - |
| LSP20_RS28445 (LSP20_28455) | 6111773..6112711 | + | 939 | WP_121199582.1 | hypothetical protein | - |
| LSP20_RS28450 (LSP20_28460) | 6112876..6113262 | + | 387 | WP_231822251.1 | LuxR C-terminal-related transcriptional regulator | - |
| LSP20_RS28455 (LSP20_28465) | 6113265..6113498 | + | 234 | WP_231822252.1 | hypothetical protein | - |
| LSP20_RS28460 (LSP20_28470) | 6113596..6113826 | + | 231 | WP_023094535.1 | Arc family DNA-binding protein | - |
| LSP20_RS28465 (LSP20_28475) | 6113829..6114164 | + | 336 | WP_003129612.1 | hypothetical protein | - |
| LSP20_RS28470 (LSP20_28480) | 6114161..6115129 | + | 969 | WP_231822253.1 | hypothetical protein | - |
| LSP20_RS31265 | 6115126..6115248 | + | 123 | WP_277990625.1 | hypothetical protein | - |
| LSP20_RS28475 (LSP20_28485) | 6115248..6115439 | + | 192 | WP_003129607.1 | hypothetical protein | - |
| LSP20_RS28480 (LSP20_28490) | 6115612..6116301 | + | 690 | WP_231822254.1 | hypothetical protein | - |
| LSP20_RS28485 (LSP20_28495) | 6116294..6116647 | + | 354 | WP_231822255.1 | hypothetical protein | - |
| LSP20_RS28490 (LSP20_28500) | 6116644..6116946 | + | 303 | WP_031685410.1 | hypothetical protein | - |
| LSP20_RS28495 (LSP20_28505) | 6117007..6117312 | - | 306 | WP_023910258.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| LSP20_RS28500 (LSP20_28510) | 6117315..6117629 | - | 315 | WP_023910260.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LSP20_RS28505 (LSP20_28515) | 6117626..6117973 | - | 348 | WP_231822256.1 | hypothetical protein | - |
| LSP20_RS28510 (LSP20_28520) | 6118208..6118741 | - | 534 | WP_231822257.1 | PIN domain-containing protein | - |
| LSP20_RS28515 (LSP20_28525) | 6118731..6119186 | - | 456 | WP_231822258.1 | hypothetical protein | - |
| LSP20_RS28520 (LSP20_28530) | 6119226..6120388 | + | 1163 | WP_231822259.1 | IS3 family transposase IS222 | Transposase |
| LSP20_RS28525 (LSP20_28535) | 6120363..6120806 | - | 444 | WP_231822260.1 | hypothetical protein | - |
| LSP20_RS28530 (LSP20_28540) | 6120962..6121612 | - | 651 | WP_023910263.1 | BRCT domain-containing protein | - |
| LSP20_RS28535 (LSP20_28545) | 6122115..6123071 | - | 957 | WP_023910265.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LSP20_RS28540 (LSP20_28550) | 6123612..6125192 | - | 1581 | WP_023517984.1 | EAL domain-containing protein | - |
| LSP20_RS28545 (LSP20_28555) | 6125322..6125819 | + | 498 | WP_023517985.1 | RDD family protein | - |
| LSP20_RS28550 (LSP20_28560) | 6125951..6127018 | - | 1068 | WP_003092863.1 | LPS export ABC transporter permease LptG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|