MGE detailed information
MGE type: Genomic_island MGE length: 21228 bp
Accession: NZ_CP089034 Location: 4957418..4978645 Organism: Escherichia coli O157:H7 strain 6535NalR Replicon: chromosome
Accession: NZ_CP089034 Location: 4957418..4978645 Organism: Escherichia coli O157:H7 strain 6535NalR Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LSI70_RS25325 (4953144) | 4953144..4953686 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| LSI70_RS25330 (4953979) | 4953979..4956129 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| LSI70_RS25335 (4956179) | 4956179..4956382 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| LSI70_RS25340 (4956393) | 4956393..4957349 | + | 957 | WP_001297640.1 | GTPase | - |
| LSI70_RS25345 (4957418) | 4957418..4958776 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| LSI70_RS29025 (4958785) | 4958785..4959069 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| LSI70_RS25350 (4959347) | 4959347..4961779 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| LSI70_RS25355 (4961846) | 4961846..4963315 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| LSI70_RS25360 (4963315) | 4963315..4965069 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - (4965219) | 4965219..4965295 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (4965219) | 4965219..4965295 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (4965219) | 4965219..4965295 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (4965219) | 4965219..4965295 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (4965219) | 4965219..4965295 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - (4965219) | 4965219..4965295 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - (4965219) | 4965219..4965295 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - (4965219) | 4965219..4965295 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| LSI70_RS25365 (4965290) | 4965290..4965631 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| LSI70_RS25370 (4965678) | 4965678..4966841 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| LSI70_RS25375 (4966889) | 4966889..4967770 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| LSI70_RS25380 (4967913) | 4967913..4968065 | - | 153 | WP_001418365.1 | hypothetical protein | - |
| LSI70_RS25385 (4968208) | 4968208..4969620 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| LSI70_RS25390 (4969863) | 4969863..4970820 | - | 958 | Protein_4985 | hypothetical protein | VF |
| LSI70_RS25395 (4971287) | 4971287..4972519 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| LSI70_RS25400 (4972560) | 4972560..4973831 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| LSI70_RS25405 (4973947) | 4973947..4975098 | + | 1152 | WP_001302771.1 | double-cubane-cluster-containing anaerobic reductase | - |
| LSI70_RS25410 (4975108) | 4975108..4975875 | + | 768 | WP_000222489.1 | putative 2-hydroxyacyl-CoA dehydratase activator YjiL | - |
| LSI70_RS25415 (4975872) | 4975872..4976138 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| LSI70_RS25420 (4976450) | 4976450..4978645 | + | 2196 | WP_000535069.1 | hypothetical protein | VF |
| LSI70_RS25425 (4978911) | 4978911..4979753 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| LSI70_RS25430 (4979821) | 4979821..4980999 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |