MGE detailed information
MGE type: Prophage MGE length: 44087 bp
Accession: NZ_CP089034 Location: 4575713..4619799 Organism: Escherichia coli O157:H7 strain 6535NalR Replicon: chromosome
Accession: NZ_CP089034 Location: 4575713..4619799 Organism: Escherichia coli O157:H7 strain 6535NalR Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LSI70_RS23505 (4572005) | 4572005..4572961 | + | 957 | WP_000121321.1 | molybdenum cofactor insertion chaperone PaoD | - |
| LSI70_RS23510 (4573140) | 4573140..4574267 | - | 1128 | WP_000171064.1 | MFS transporter | - |
| LSI70_RS23515 (4574409) | 4574409..4575467 | - | 1059 | WP_001303808.1 | alpha/beta hydrolase | - |
| LSI70_RS23520 (4575713) | 4575713..4576615 | + | 903 | WP_010917758.1 | hypothetical protein | VF |
| LSI70_RS23525 (4577318) | 4577318..4577596 | - | 279 | WP_001301751.1 | hypothetical protein | - |
| LSI70_RS23530 (4577763) | 4577763..4578485 | - | 723 | WP_000361969.1 | hypothetical protein | VF |
| LSI70_RS23535 (4578584) | 4578584..4579483 | + | 900 | WP_000687183.1 | hypothetical protein | VF |
| LSI70_RS23540 (4580159) | 4580159..4581115 | + | 957 | WP_000205213.1 | hypothetical protein | - |
| LSI70_RS23545 (4581248) | 4581248..4583581 | - | 2334 | WP_000016225.1 | primase-like DNA-binding domain-containing protein | - |
| LSI70_RS23550 (4583595) | 4583595..4583918 | - | 324 | WP_000562750.1 | DUF5375 family protein | - |
| LSI70_RS23555 (4583918) | 4583918..4584139 | - | 222 | WP_001071227.1 | hypothetical protein | - |
| LSI70_RS23560 (4584136) | 4584136..4584693 | - | 558 | WP_000973389.1 | host cell division inhibitor Icd-like protein | - |
| LSI70_RS23565 (4584690) | 4584690..4584950 | - | 261 | WP_001244581.1 | AlpA family transcriptional regulator | - |
| LSI70_RS23570 (4585884) | 4585884..4586636 | + | 753 | WP_000154958.1 | septation initiation protein | - |
| LSI70_RS23575 (4586633) | 4586633..4587184 | + | 552 | WP_000968317.1 | phage polarity suppression protein | - |
| LSI70_RS23580 (4587190) | 4587190..4587462 | + | 273 | WP_001185340.1 | ogr/Delta-like zinc finger family protein | - |
| LSI70_RS23585 (4587872) | 4587872..4588438 | - | 567 | WP_000350115.1 | hypothetical protein | - |
| LSI70_RS23590 (4588438) | 4588438..4589028 | - | 591 | WP_000647284.1 | hypothetical protein | - |
| LSI70_RS23595 (4589309) | 4589309..4590522 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| LSI70_RS23600 (4590525) | 4590525..4591004 | - | 480 | WP_000999328.1 | ATP-binding protein | - |
| LSI70_RS23605 (4590997) | 4590997..4591455 | - | 459 | WP_000251694.1 | hypothetical protein | - |
| LSI70_RS23610 (4591455) | 4591455..4592072 | - | 618 | WP_001303996.1 | hypothetical protein | - |
| LSI70_RS23615 (4592045) | 4592045..4592461 | - | 417 | WP_000082144.1 | hypothetical protein | - |
| LSI70_RS23620 (4592465) | 4592465..4593646 | - | 1182 | WP_001130487.1 | hypothetical protein ; Integrase | Integrase |
| LSI70_RS23625 (4594133) | 4594133..4594567 | + | 435 | Protein_4640 | IS3 family transposase ISEc48 | Transposase |
| LSI70_RS23630 (4594609) | 4594609..4595352 | - | 744 | WP_000246059.1 | AraC family transcriptional regulator | - |
| LSI70_RS23635 (4596176) | 4596176..4596949 | + | 774 | WP_000355475.1 | hypothetical protein | - |
| LSI70_RS23640 (4597007) | 4597007..4597561 | - | 555 | WP_000904979.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| LSI70_RS23645 (4597591) | 4597591..4598001 | + | 411 | WP_001115553.1 | tail fiber protein | - |
| LSI70_RS23650 (4598022) | 4598022..4598465 | + | 444 | WP_000344820.1 | tail assembly chaperone | - |
| LSI70_RS23655 (4598437) | 4598437..4599030 | - | 594 | WP_000805544.1 | tail fiber assembly protein | - |
| LSI70_RS23660 (4599030) | 4599030..4599824 | - | 795 | WP_001096963.1 | tail fiber protein | - |
| LSI70_RS23665 (4599824) | 4599824..4600072 | - | 249 | Protein_4648 | phage replication protein | - |
| LSI70_RS23670 (4600132) | 4600132..4601054 | - | 923 | Protein_4649 | replication protein | - |
| LSI70_RS23675 (4601087) | 4601087..4601380 | - | 294 | WP_000251069.1 | lambda phage CII family protein | - |
| LSI70_RS23680 (4601499) | 4601499..4601699 | - | 201 | WP_000437875.1 | Cro/CI family transcriptional regulator | - |
| LSI70_RS23685 (4601800) | 4601800..4602513 | + | 714 | WP_001274756.1 | LexA family transcriptional regulator | - |
| LSI70_RS23690 (4602641) | 4602641..4603030 | + | 390 | WP_000708838.1 | hypothetical protein | - |
| LSI70_RS23695 (4603270) | 4603270..4603515 | + | 246 | WP_001303805.1 | antitermination protein N | - |
| LSI70_RS23700 (4603460) | 4603460..4604380 | + | 921 | Protein_4655 | hypothetical protein ; Integrase | Integrase |
| LSI70_RS23710 (4604585) | 4604585..4605838 | - | 1254 | WP_000893282.1 | glutamate-5-semialdehyde dehydrogenase | - |
| LSI70_RS23715 (4605850) | 4605850..4606953 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| LSI70_RS23720 (4607241) | 4607241..4608296 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| LSI70_RS23725 (4608335) | 4608335..4608736 | - | 402 | WP_000174701.1 | sigma factor-binding protein Crl | - |
| - (4609454) | 4609454..4609534 | - | 81 | NuclAT_12 | - | - |
| - (4609454) | 4609454..4609534 | - | 81 | NuclAT_12 | - | - |
| - (4609454) | 4609454..4609534 | - | 81 | NuclAT_12 | - | - |
| - (4609454) | 4609454..4609534 | - | 81 | NuclAT_12 | - | - |
| LSI70_RS23730 (4608794) | 4608794..4610038 | - | 1245 | WP_000189536.1 | esterase FrsA | - |
| LSI70_RS23735 (4610130) | 4610130..4610588 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| LSI70_RS23740 (4610849) | 4610849..4612306 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| LSI70_RS23745 (4612363) | 4612363..4612884 | - | 522 | Protein_4663 | peptide chain release factor H | - |
| LSI70_RS23750 (4612883) | 4612883..4613086 | - | 204 | Protein_4664 | RtcB family protein | - |
| LSI70_RS23755 (4613405) | 4613405..4613857 | - | 453 | WP_001059871.1 | GNAT family N-acetyltransferase | - |
| LSI70_RS23760 (4613867) | 4613867..4614265 | - | 399 | WP_001263495.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| LSI70_RS23765 (4614268) | 4614268..4614561 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| LSI70_RS23770 (4614613) | 4614613..4615668 | - | 1056 | WP_001226188.1 | DNA polymerase IV | - |
| LSI70_RS23775 (4615739) | 4615739..4616524 | - | 786 | WP_000207556.1 | hypothetical protein | VF |
| LSI70_RS23780 (4616496) | 4616496..4618208 | + | 1713 | Protein_4670 | hypothetical protein | VF |
| LSI70_RS23785 (4618353) | 4618353..4618850 | - | 498 | Protein_4671 | REP-associated tyrosine transposase RayT | - |
| LSI70_RS23790 (4619026) | 4619026..4619799 | - | 774 | WP_000543891.1 | hypothetical protein | VF |
| LSI70_RS23795 (4619985) | 4619985..4620245 | + | 261 | WP_000729705.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| LSI70_RS23800 (4620248) | 4620248..4620524 | + | 277 | Protein_4674 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| LSI70_RS23805 (4620680) | 4620680..4621420 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| LSI70_RS23810 (4621391) | 4621391..4622158 | - | 768 | WP_001301698.1 | class II glutamine amidotransferase | - |
| LSI70_RS23815 (4622263) | 4622263..4622841 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|