MGE detailed information
MGE type: Genomic_island MGE length: 21228 bp
Accession: NZ_CP089032 Location: 4962091..4983318 Organism: Escherichia coli O157:H7 strain 6535WT Replicon: chromosome
Accession: NZ_CP089032 Location: 4962091..4983318 Organism: Escherichia coli O157:H7 strain 6535WT Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LSI69_RS25320 (4957817) | 4957817..4958359 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| LSI69_RS25325 (4958652) | 4958652..4960802 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| LSI69_RS25330 (4960852) | 4960852..4961055 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| LSI69_RS25335 (4961066) | 4961066..4962022 | + | 957 | WP_001297640.1 | GTPase | - |
| LSI69_RS25340 (4962091) | 4962091..4963449 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| LSI69_RS29005 (4963458) | 4963458..4963742 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| LSI69_RS25345 (4964020) | 4964020..4966452 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| LSI69_RS25350 (4966519) | 4966519..4967988 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| LSI69_RS25355 (4967988) | 4967988..4969742 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - (4969892) | 4969892..4969968 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (4969892) | 4969892..4969968 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (4969892) | 4969892..4969968 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (4969892) | 4969892..4969968 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (4969892) | 4969892..4969968 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - (4969892) | 4969892..4969968 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - (4969892) | 4969892..4969968 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - (4969892) | 4969892..4969968 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| LSI69_RS25360 (4969963) | 4969963..4970304 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| LSI69_RS25365 (4970351) | 4970351..4971514 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| LSI69_RS25370 (4971562) | 4971562..4972443 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| LSI69_RS25375 (4972586) | 4972586..4972738 | - | 153 | WP_001418365.1 | hypothetical protein | - |
| LSI69_RS25380 (4972881) | 4972881..4974293 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| LSI69_RS25385 (4974536) | 4974536..4975493 | - | 958 | Protein_4985 | hypothetical protein | VF |
| LSI69_RS25390 (4975960) | 4975960..4977192 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| LSI69_RS25395 (4977233) | 4977233..4978504 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| LSI69_RS25400 (4978620) | 4978620..4979771 | + | 1152 | WP_001302771.1 | double-cubane-cluster-containing anaerobic reductase | - |
| LSI69_RS25405 (4979781) | 4979781..4980548 | + | 768 | WP_000222489.1 | putative 2-hydroxyacyl-CoA dehydratase activator YjiL | - |
| LSI69_RS25410 (4980545) | 4980545..4980811 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| LSI69_RS25415 (4981123) | 4981123..4983318 | + | 2196 | WP_000535069.1 | hypothetical protein | VF |
| LSI69_RS25420 (4983584) | 4983584..4984426 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| LSI69_RS25425 (4984494) | 4984494..4985672 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |