MGE detailed information
MGE type: Prophage MGE length: 48844 bp
Accession: NZ_CP089031 Location: 2967833..3016676 Organism: Escherichia coli strain 7386Nal Replicon: chromosome
Accession: NZ_CP089031 Location: 2967833..3016676 Organism: Escherichia coli strain 7386Nal Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CO543_RS15235 (2964441) | 2964441..2965559 | - | 1119 | WP_001301613.1 | hydrogenase 1 small subunit | - |
| CO543_RS15245 (2966675) | 2966675..2967708 | + | 1034 | Protein_2997 | Tir-cytoskeleton coupling protein TccP2 | - |
| CO543_RS15250 (2967833) | 2967833..2968102 | - | 270 | WP_001023352.1 | phage tail fiber C-terminal domain-containing protein | - |
| CO543_RS15255 (2968104) | 2968104..2969417 | - | 1314 | WP_000268962.1 | ISNCY family transposase KIS | Transposase |
| CO543_RS15260 (2969481) | 2969481..2970080 | - | 600 | WP_001230444.1 | hypothetical protein | VF |
| CO543_RS15265 (2970148) | 2970148..2973621 | - | 3474 | WP_000515111.1 | host specificity protein J | - |
| CO543_RS15270 (2973755) | 2973755..2974282 | + | 528 | WP_000649829.1 | hypothetical protein | VF |
| CO543_RS15275 (2974473) | 2974473..2975054 | - | 582 | WP_001090031.1 | tail assembly protein | - |
| CO543_RS15280 (2975051) | 2975051..2975794 | - | 744 | WP_000194801.1 | C40 family peptidase | - |
| CO543_RS15285 (2975805) | 2975805..2976503 | - | 699 | WP_001151105.1 | phage minor tail protein L | - |
| CO543_RS15290 (2976503) | 2976503..2976832 | - | 330 | WP_000847274.1 | phage tail protein | - |
| CO543_RS15295 (2976829) | 2976829..2979408 | - | 2580 | WP_000082463.1 | phage tail tape measure protein | - |
| CO543_RS15300 (2979389) | 2979389..2979802 | - | 414 | WP_000533402.1 | phage tail assembly protein T | - |
| CO543_RS15305 (2979829) | 2979829..2980260 | - | 432 | WP_000479117.1 | phage minor tail protein G | - |
| CO543_RS15310 (2980274) | 2980274..2981014 | - | 741 | WP_029208397.1 | phage tail protein | - |
| CO543_RS15315 (2981011) | 2981011..2981262 | - | 252 | Protein_3011 | major capsid protein | - |
| CO543_RS15320 (2981320) | 2981320..2981667 | - | 348 | WP_000256723.1 | head decoration protein | - |
| CO543_RS15325 (2981704) | 2981704..2983207 | - | 1504 | Protein_3013 | S49 family peptidase | - |
| CO543_RS15330 (2983208) | 2983208..2984785 | - | 1578 | Protein_3014 | phage portal protein | - |
| CO543_RS15335 (2984782) | 2984782..2984988 | - | 207 | WP_000259002.1 | gpW family head-tail joining protein | - |
| CO543_RS15340 (2984972) | 2984972..2985595 | - | 624 | WP_231833552.1 | phage terminase large subunit family protein | - |
| CO543_RS15345 (2985567) | 2985567..2985788 | - | 222 | WP_231833553.1 | phage terminase large subunit family protein | - |
| CO543_RS15350 (2985751) | 2985751..2986653 | - | 903 | WP_231833554.1 | phage terminase large subunit family protein | - |
| CO543_RS15355 (2986682) | 2986682..2988618 | - | 1937 | Protein_3019 | phage major capsid protein | - |
| CO543_RS15360 (2988682) | 2988682..2990343 | - | 1662 | WP_001301438.1 | terminase large subunit | - |
| CO543_RS15365 (2990340) | 2990340..2990903 | - | 564 | WP_000958416.1 | terminase small subunit | - |
| CO543_RS15370 (2991195) | 2991195..2991560 | - | 366 | WP_000279796.1 | HNH endonuclease | - |
| CO543_RS15375 (2991602) | 2991602..2991829 | + | 228 | WP_000095736.1 | YlcI/YnfO family protein | - |
| CO543_RS15380 (2992254) | 2992254..2992439 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| CO543_RS15385 (2992697) | 2992697..2992813 | - | 117 | WP_000539789.1 | hypothetical protein | - |
| CO543_RS15390 (2992813) | 2992813..2993382 | - | 570 | WP_001056806.1 | phage antirepressor N-terminal domain-containing protein | - |
| CO543_RS15395 (2993653) | 2993653..2994186 | - | 534 | WP_000992137.1 | lysozyme | - |
| CO543_RS15400 (2994237) | 2994237..2994581 | - | 345 | WP_000731241.1 | YdfR family protein | - |
| CO543_RS15405 (2994586) | 2994586..2994801 | - | 216 | WP_024180155.1 | class II holin family protein | - |
| CO543_RS15410 (2995241) | 2995241..2997091 | - | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| CO543_RS15415 (2997068) | 2997068..2997211 | + | 144 | Protein_3031 | hypothetical protein | - |
| CO543_RS15420 (2997406) | 2997406..2997573 | - | 168 | WP_000216653.1 | DUF3927 family protein | - |
| CO543_RS15425 (2997570) | 2997570..2997998 | - | 429 | WP_001303509.1 | tellurite resistance protein | - |
| CO543_RS15445 (2998636) | 2998636..2999325 | - | 690 | WP_001059381.1 | bacteriophage antitermination protein Q | - |
| CO543_RS15450 (2999322) | 2999322..2999681 | - | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| CO543_RS15455 (2999694) | 2999694..3000743 | - | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| CO543_RS15460 (3000745) | 3000745..3001023 | - | 279 | WP_012779366.1 | hypothetical protein | - |
| CO543_RS15465 (3001191) | 3001191..3001346 | - | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| CO543_RS15470 (3001592) | 3001592..3001696 | - | 105 | WP_001278450.1 | hypothetical protein | - |
| CO543_RS15475 (3001812) | 3001812..3002396 | - | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| CO543_RS15480 (3002453) | 3002453..3002848 | - | 396 | WP_001118159.1 | DUF977 family protein | - |
| CO543_RS15485 (3002864) | 3002864..3003633 | - | 770 | Protein_3042 | DUF1627 domain-containing protein | - |
| CO543_RS15490 (3003659) | 3003659..3004399 | - | 741 | WP_000788938.1 | ATP-binding protein | - |
| CO543_RS15495 (3004406) | 3004406..3005368 | - | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| CO543_RS15500 (3005391) | 3005391..3005816 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| CO543_RS15505 (3005813) | 3005813..3006115 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| CO543_RS15510 (3006213) | 3006213..3006584 | + | 372 | WP_001169686.1 | hypothetical protein | - |
| CO543_RS15515 (3006605) | 3006605..3006796 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| CO543_RS15520 (3006798) | 3006798..3007076 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CO543_RS15525 (3007429) | 3007429..3007728 | + | 300 | WP_001240334.1 | hypothetical protein | - |
| CO543_RS15530 (3007800) | 3007800..3008018 | + | 219 | WP_001171930.1 | protein YdfC | - |
| CO543_RS15535 (3008587) | 3008587..3008775 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| CO543_RS15540 (3008772) | 3008772..3008963 | + | 192 | WP_001090200.1 | DUF1482 family protein | - |
| CO543_RS15545 (3009056) | 3009056..3010141 | + | 1086 | Protein_3054 | exonuclease | - |
| CO543_RS15550 (3010192) | 3010192..3011405 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| CO543_RS15555 (3011446) | 3011446..3012840 | + | 1395 | Protein_3056 | 3'-5' exoribonuclease | - |
| CO543_RS15560 (3012913) | 3012913..3013164 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| CO543_RS15565 (3013199) | 3013199..3013881 | + | 683 | Protein_3058 | DUF3596 domain-containing protein | - |
| CO543_RS15570 (3013861) | 3013861..3013947 | - | 87 | Protein_3059 | hypothetical protein | - |
| CO543_RS15575 (3014153) | 3014153..3014479 | - | 327 | WP_001302046.1 | YnfA family protein | - |
| CO543_RS15580 (3014614) | 3014614..3014955 | + | 342 | WP_000705189.1 | DUF1283 family protein | - |
| CO543_RS15585 (3014990) | 3014990..3015550 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| CO543_RS15590 (3015553) | 3015553..3016263 | - | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| CO543_RS15595 (3016371) | 3016371..3016676 | + | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| CO543_RS15600 (3016875) | 3016875..3019301 | + | 2427 | WP_000041704.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|