MGE detailed information
MGE type: Conjugative plasmid MGE length: 107790 bp
Accession: NZ_CP089028 Location: 1..107790 Organism: Klebsiella pneumoniae strain 49210 Replicon: plasmid p49210-107.8
Accession: NZ_CP089028 Location: 1..107790 Organism: Klebsiella pneumoniae strain 49210 Replicon: plasmid p49210-107.8
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LRY78_RS27050 (LRY78_27040) | 1..756 | + | 756 | WP_001568031.1 | replication initiation protein RepE | - |
| LRY78_RS27055 (LRY78_27045) | 1741..2373 | + | 633 | WP_017901447.1 | ParA family protein | - |
| LRY78_RS27060 (LRY78_27050) | 2373..2747 | + | 375 | WP_017901448.1 | hypothetical protein | - |
| LRY78_RS27065 (LRY78_27055) | 2987..3961 | + | 975 | WP_020801689.1 | plasmid segregation protein ParM | - |
| LRY78_RS27070 (LRY78_27060) | 3965..4357 | + | 393 | WP_046664218.1 | plasmid partitioning/stability family protein | - |
| LRY78_RS27075 (LRY78_27065) | 4927..5148 | - | 222 | WP_046664217.1 | helix-turn-helix domain-containing protein | - |
| LRY78_RS27080 (LRY78_27070) | 5179..5625 | - | 447 | WP_046664216.1 | hypothetical protein | - |
| LRY78_RS27085 (LRY78_27075) | 5896..6201 | - | 306 | WP_046664215.1 | hypothetical protein | - |
| LRY78_RS27090 (LRY78_27080) | 6255..6506 | - | 252 | WP_004206783.1 | plasmid stabilization protein | - |
| LRY78_RS27095 (LRY78_27085) | 6585..7856 | - | 1272 | WP_073558207.1 | Y-family DNA polymerase | - |
| LRY78_RS27100 (LRY78_27090) | 7856..8281 | - | 426 | WP_001776124.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LRY78_RS27105 (LRY78_27095) | 8685..10172 | + | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| LRY78_RS27110 (LRY78_27100) | 10406..10636 | + | 231 | WP_004118481.1 | hypothetical protein | - |
| LRY78_RS27115 (LRY78_27105) | 11157..11582 | + | 426 | WP_032456807.1 | antirestriction protein | - |
| LRY78_RS27120 (LRY78_27110) | 11819..12073 | + | 255 | WP_049139361.1 | DNA polymerase III subunit theta | - |
| LRY78_RS27125 (LRY78_27115) | 12108..12425 | + | 318 | WP_004118473.1 | hypothetical protein | - |
| LRY78_RS27130 (LRY78_27120) | 13207..13434 | + | 228 | WP_020803451.1 | hypothetical protein | - |
| LRY78_RS27135 (LRY78_27125) | 13526..13756 | + | 231 | WP_001568051.1 | hypothetical protein | - |
| LRY78_RS27140 (LRY78_27130) | 13808..15163 | + | 1356 | WP_046664187.1 | DUF3560 domain-containing protein | - |
| LRY78_RS27145 (LRY78_27135) | 15211..15777 | + | 567 | WP_001568053.1 | methyltransferase | - |
| LRY78_RS27150 (LRY78_27140) | 16605..17147 | + | 543 | WP_073558210.1 | single-stranded DNA-binding protein | - |
| LRY78_RS27155 (LRY78_27145) | 17196..17444 | + | 249 | WP_032431380.1 | DUF905 domain-containing protein | - |
| LRY78_RS27160 (LRY78_27150) | 17514..19571 | + | 2058 | WP_231822191.1 | ParB/RepB/Spo0J family partition protein | - |
| LRY78_RS27165 (LRY78_27155) | 19616..20047 | + | 432 | WP_015065515.1 | conjugation system SOS inhibitor PsiB | - |
| LRY78_RS27170 (LRY78_27160) | 20044..20772 | + | 729 | WP_015065618.1 | plasmid SOS inhibition protein A | - |
| LRY78_RS27175 (LRY78_27165) | 20769..21095 | + | 327 | WP_001568059.1 | hypothetical protein | - |
| LRY78_RS27180 (LRY78_27170) | 21151..21525 | + | 375 | WP_073558209.1 | hypothetical protein | - |
| LRY78_RS27185 (LRY78_27175) | 21703..22782 | - | 1080 | WP_004220208.1 | IS481 family transposase ISKpn28 | Transposase |
| LRY78_RS27190 (LRY78_27180) | 22854..23015 | + | 162 | WP_004118124.1 | type I toxin-antitoxin system Hok family toxin | - |
| LRY78_RS27195 (LRY78_27185) | 23714..23986 | + | 273 | WP_032445785.1 | hypothetical protein | - |
| LRY78_RS27200 (LRY78_27190) | 23983..24333 | + | 351 | WP_032445787.1 | hypothetical protein | - |
| LRY78_RS27205 (LRY78_27195) | 24348..24665 | + | 318 | WP_032445789.1 | hypothetical protein | - |
| LRY78_RS27210 (LRY78_27200) | 25505..25861 | + | 357 | WP_019706019.1 | hypothetical protein | - |
| LRY78_RS27215 (LRY78_27205) | 25922..26134 | + | 213 | WP_032445756.1 | hypothetical protein | - |
| LRY78_RS27220 (LRY78_27210) | 26145..26369 | + | 225 | WP_014343499.1 | hypothetical protein | - |
| LRY78_RS27225 (LRY78_27215) | 26450..26770 | + | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LRY78_RS27230 (LRY78_27220) | 26760..27038 | + | 279 | WP_004152721.1 | helix-turn-helix transcriptional regulator | - |
| LRY78_RS27235 (LRY78_27225) | 27039..27452 | + | 414 | WP_013023817.1 | helix-turn-helix domain-containing protein | - |
| LRY78_RS27240 (LRY78_27230) | 28170..28550 | + | 381 | WP_020802391.1 | hypothetical protein | - |
| LRY78_RS27245 (LRY78_27235) | 28617..28964 | + | 348 | WP_032445771.1 | hypothetical protein | - |
| LRY78_RS27250 (LRY78_27240) | 29059..29205 | + | 147 | WP_004152750.1 | hypothetical protein | - |
| LRY78_RS27255 (LRY78_27245) | 29256..30089 | + | 834 | WP_032445769.1 | N-6 DNA methylase | - |
| LRY78_RS27260 (LRY78_27250) | 30905..31726 | + | 822 | WP_032441618.1 | DUF932 domain-containing protein | - |
| LRY78_RS27265 (LRY78_27255) | 31759..32088 | + | 330 | WP_011977736.1 | DUF5983 family protein | - |
| LRY78_RS27270 (LRY78_27260) | 32121..32606 | - | 486 | WP_001568108.1 | hypothetical protein | VF |
| LRY78_RS27275 (LRY78_27265) | 33038..33430 | + | 393 | WP_073558191.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LRY78_RS27280 (LRY78_27270) | 33660..34361 | + | 702 | WP_004194113.1 | hypothetical protein | - |
| LRY78_RS27285 (LRY78_27275) | 34447..34647 | + | 201 | WP_004194116.1 | TraY domain-containing protein | - |
| LRY78_RS27290 (LRY78_27280) | 34716..35084 | + | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| LRY78_RS27295 (LRY78_27285) | 35098..35403 | + | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| LRY78_RS27300 (LRY78_27290) | 35423..35989 | + | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| LRY78_RS27305 (LRY78_27295) | 35976..36716 | + | 741 | WP_013023821.1 | type-F conjugative transfer system secretin TraK | - |
| LRY78_RS27310 (LRY78_27300) | 36716..38140 | + | 1425 | WP_073558192.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| LRY78_RS27315 (LRY78_27305) | 38254..38838 | + | 585 | WP_009309868.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LRY78_RS27320 (LRY78_27310) | 38970..39380 | + | 411 | WP_009309869.1 | hypothetical protein | - |
| LRY78_RS27325 (LRY78_27315) | 39486..39704 | + | 219 | WP_004195468.1 | hypothetical protein | - |
| LRY78_RS27330 (LRY78_27320) | 39705..40016 | + | 312 | WP_004195465.1 | hypothetical protein | - |
| LRY78_RS27335 (LRY78_27325) | 40083..40487 | + | 405 | WP_004197817.1 | hypothetical protein | - |
| LRY78_RS27340 (LRY78_27330) | 40530..40682 | + | 153 | WP_224518895.1 | hypothetical protein | - |
| LRY78_RS27345 (LRY78_27335) | 40863..41261 | + | 399 | WP_023179972.1 | hypothetical protein | - |
| LRY78_RS27350 (LRY78_27340) | 41333..43972 | + | 2640 | WP_023284638.1 | type IV secretion system protein TraC | - |
| LRY78_RS27355 (LRY78_27345) | 43972..44361 | + | 390 | WP_004197815.1 | type-F conjugative transfer system protein TrbI | - |
| LRY78_RS27360 (LRY78_27350) | 44361..44987 | + | 627 | WP_009309871.1 | type-F conjugative transfer system protein TraW | - |
| LRY78_RS27365 (LRY78_27355) | 45029..45418 | + | 390 | WP_004194992.1 | hypothetical protein | - |
| LRY78_RS27370 (LRY78_27360) | 45415..46404 | + | 990 | WP_073558193.1 | conjugal transfer pilus assembly protein TraU | - |
| LRY78_RS27375 (LRY78_27365) | 46417..47055 | + | 639 | WP_011977786.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| LRY78_RS27380 (LRY78_27370) | 47114..49069 | + | 1956 | WP_004152673.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| LRY78_RS27385 (LRY78_27375) | 49101..49355 | + | 255 | WP_073558194.1 | conjugal transfer protein TrbE | - |
| LRY78_RS27390 (LRY78_27380) | 49333..49581 | + | 249 | WP_004152675.1 | hypothetical protein | - |
| LRY78_RS27395 (LRY78_27385) | 49594..49920 | + | 327 | WP_004152676.1 | hypothetical protein | - |
| LRY78_RS27400 (LRY78_27390) | 49941..50693 | + | 753 | WP_004152677.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LRY78_RS27405 (LRY78_27395) | 50704..50943 | + | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LRY78_RS27410 (LRY78_27400) | 50915..51472 | + | 558 | WP_013214031.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| LRY78_RS27415 (LRY78_27405) | 51518..51961 | + | 444 | WP_004194305.1 | F-type conjugal transfer protein TrbF | - |
| LRY78_RS27420 (LRY78_27410) | 51939..53318 | + | 1380 | WP_014343487.1 | conjugal transfer pilus assembly protein TraH | - |
| LRY78_RS27425 (LRY78_27415) | 53318..56167 | + | 2850 | WP_013609534.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| LRY78_RS27430 (LRY78_27420) | 56170..56703 | + | 534 | WP_014343486.1 | conjugal transfer protein TraS | - |
| LRY78_RS27435 (LRY78_27425) | 56889..57620 | + | 732 | WP_004152629.1 | conjugal transfer complement resistance protein TraT | - |
| LRY78_RS27440 (LRY78_27430) | 57813..58502 | + | 690 | WP_231822189.1 | hypothetical protein | - |
| LRY78_RS27445 (LRY78_27435) | 58631..60943 | + | 2313 | WP_077272951.1 | type IV conjugative transfer system coupling protein TraD | - |
| LRY78_RS27450 (LRY78_27440) | 60943..66204 | + | 5262 | WP_231822190.1 | Multifunctional conjugation protein TraI | Relaxase |
| LRY78_RS27455 (LRY78_27445) | 66284..67009 | + | 726 | WP_221347608.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| LRY78_RS27460 (LRY78_27450) | 67165..67758 | + | 594 | WP_015065544.1 | fertility inhibition protein FinO | - |
| LRY78_RS27465 (LRY78_27455) | 67919..68522 | + | 604 | Protein_83 | PIN domain-containing protein | - |
| LRY78_RS27470 (LRY78_27460) | 68572..69216 | + | 645 | WP_064291676.1 | hypothetical protein | - |
| LRY78_RS27475 (LRY78_27465) | 69272..69922 | + | 651 | WP_014343480.1 | DUF2726 domain-containing protein | - |
| LRY78_RS27480 (LRY78_27470) | 69919..70227 | + | 309 | WP_004152383.1 | hypothetical protein | - |
| LRY78_RS27485 (LRY78_27475) | 70331..70882 | + | 552 | WP_004152384.1 | Phospholipase D | VF |
| LRY78_RS27490 (LRY78_27480) | 71000..71269 | + | 270 | WP_013609506.1 | replication regulatory protein RepA | - |
| LRY78_RS27495 (LRY78_27485) | 71501..71578 | + | 78 | WP_004171457.1 | RepA leader peptide Tap | - |
| LRY78_RS27500 (LRY78_27490) | 71571..72428 | + | 858 | WP_013023768.1 | incFII family plasmid replication initiator RepA | - |
| LRY78_RS27505 (LRY78_27495) | 73457..74071 | + | 615 | WP_032440595.1 | DUF2913 family protein | - |
| LRY78_RS27510 (LRY78_27500) | 74162..75649 | - | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| LRY78_RS27515 (LRY78_27505) | 76051..76476 | + | 426 | WP_045325066.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LRY78_RS27520 (LRY78_27510) | 76476..77255 | + | 780 | WP_108970993.1 | Y-family DNA polymerase | - |
| LRY78_RS27525 (LRY78_27515) | 77403..78959 | - | 1557 | WP_053897648.1 | Aerotaxis receptor | VF |
| LRY78_RS27530 (LRY78_27520) | 78984..79688 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LRY78_RS27535 (LRY78_27525) | 80277..80438 | + | 162 | Protein_97 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| LRY78_RS27540 (LRY78_27530) | 80489..81193 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LRY78_RS27545 (LRY78_27535) | 81279..81392 | + | 114 | Protein_99 | DNA-binding protein | - |
| LRY78_RS27550 (LRY78_27540) | 81751..82635 | - | 885 | WP_130938659.1 | hypothetical protein | ARG |
| LRY78_RS27555 (LRY78_27545) | 82691..84166 | - | 1476 | WP_000052512.1 | putative ABC transporter ATP-binding protein YbiT | ARG |
| LRY78_RS27560 (LRY78_27550) | 84565..85749 | - | 1185 | WP_002001451.1 | IS4 family transposase ISEc29 | Transposase |
| LRY78_RS27565 (LRY78_27555) | 85798..85983 | + | 186 | WP_002026779.1 | hypothetical protein | - |
| LRY78_RS27570 (LRY78_27560) | 86465..87238 | - | 774 | WP_000359986.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| LRY78_RS27575 (LRY78_27565) | 87564..88403 | - | 840 | Protein_105 | IS5 family transposase ISEc35 | Transposase |
| LRY78_RS27580 (LRY78_27570) | 88637..90178 | - | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| LRY78_RS27585 (LRY78_27575) | 90583..91422 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| LRY78_RS27590 (LRY78_27580) | 91416..91763 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| LRY78_RS27595 (LRY78_27585) | 91932..92486 | - | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| LRY78_RS27600 (LRY78_27590) | 92778..92870 | + | 93 | Protein_110 | hypothetical protein | - |
| LRY78_RS27605 (LRY78_27595) | 92935..93639 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LRY78_RS27610 (LRY78_27600) | 93691..94557 | + | 867 | Protein_112 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| LRY78_RS27615 (LRY78_27605) | 94590..97487 | - | 2898 | WP_001553819.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| LRY78_RS27620 (LRY78_27610) | 97582..98187 | + | 606 | WP_000509965.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| LRY78_RS27625 (LRY78_27615) | 98343..99014 | + | 672 | WP_032456798.1 | SOS response-associated peptidase | - |
| LRY78_RS27630 (LRY78_27620) | 99193..99516 | + | 324 | WP_021312689.1 | hypothetical protein | - |
| LRY78_RS27635 (LRY78_27625) | 99757..100533 | + | 777 | WP_060617172.1 | DUF2971 domain-containing protein | - |
| LRY78_RS27640 (LRY78_27630) | 100669..100923 | - | 255 | WP_065810046.1 | hypothetical protein | - |
| LRY78_RS27645 (LRY78_27635) | 100999..101256 | - | 258 | WP_047665813.1 | hypothetical protein | - |
| LRY78_RS27650 (LRY78_27640) | 101305..101508 | - | 204 | WP_004152106.1 | HHA domain-containing protein | - |
| LRY78_RS27655 (LRY78_27645) | 101542..101910 | - | 369 | WP_064148000.1 | hypothetical protein | - |
| LRY78_RS27660 (LRY78_27650) | 101954..102448 | - | 495 | WP_124043240.1 | DNA-binding protein | - |
| LRY78_RS27665 (LRY78_27655) | 102479..103045 | - | 567 | WP_124043238.1 | hypothetical protein | - |
| LRY78_RS27670 (LRY78_27660) | 103042..103305 | - | 264 | WP_047665809.1 | hypothetical protein | - |
| LRY78_RS27675 (LRY78_27665) | 103901..104119 | + | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| LRY78_RS27680 (LRY78_27670) | 104121..104426 | + | 306 | WP_004197633.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| LRY78_RS27685 (LRY78_27675) | 104595..104996 | + | 402 | WP_073558206.1 | hypothetical protein | - |
| LRY78_RS27690 (LRY78_27680) | 105023..105346 | + | 324 | WP_004197641.1 | hypothetical protein | - |
| LRY78_RS27695 (LRY78_27685) | 105343..106359 | + | 1017 | WP_046664221.1 | hypothetical protein | - |
| LRY78_RS27700 (LRY78_27690) | 106557..107342 | + | 786 | WP_046664219.1 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|