MGE detailed information
MGE type: Genomic_island MGE length: 22349 bp
Accession: NZ_CP088923 Location: 1374734..1397082 Organism: Rhodanobacter thiooxydans strain FW510-R12 Replicon: chromosome
Accession: NZ_CP088923 Location: 1374734..1397082 Organism: Rhodanobacter thiooxydans strain FW510-R12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LRK53_RS05930 (LRK53_05930) | 1370476..1370754 | - | 279 | Protein_1179 | endonuclease domain-containing protein | - |
| LRK53_RS05935 (LRK53_05935) | 1371115..1372386 | - | 1272 | WP_027493029.1 | type II secretion system F family protein | - |
| LRK53_RS05940 (LRK53_05940) | 1372532..1374256 | - | 1725 | WP_027493028.1 | type IV-A pilus assembly ATPase PilB | - |
| LRK53_RS05945 (LRK53_05945) | 1374734..1374976 | + | 243 | WP_027493027.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| LRK53_RS05950 (LRK53_05950) | 1374973..1375368 | + | 396 | WP_027493026.1 | type II toxin-antitoxin system VapC family toxin | - |
| LRK53_RS05955 (LRK53_05955) | 1375524..1375850 | - | 327 | WP_051257590.1 | DUF86 domain-containing protein | - |
| LRK53_RS05960 (LRK53_05960) | 1375889..1376179 | - | 291 | WP_027493024.1 | nucleotidyltransferase family protein | - |
| LRK53_RS05965 (LRK53_05965) | 1376511..1377365 | + | 855 | WP_027493023.1 | glycosyltransferase family 2 protein | - |
| LRK53_RS05970 (LRK53_05970) | 1377358..1378518 | + | 1161 | WP_027493022.1 | glycosyltransferase family 4 protein | - |
| LRK53_RS05975 (LRK53_05975) | 1378511..1379281 | + | 771 | WP_081666625.1 | class I SAM-dependent methyltransferase | - |
| LRK53_RS05980 (LRK53_05980) | 1379278..1380345 | + | 1068 | WP_081666624.1 | glycosyltransferase family 4 protein | - |
| LRK53_RS05985 (LRK53_05985) | 1380357..1381358 | + | 1002 | WP_037089869.1 | class I SAM-dependent methyltransferase | - |
| LRK53_RS05990 (LRK53_05990) | 1381358..1382209 | + | 852 | WP_185754653.1 | glycosyltransferase | - |
| LRK53_RS05995 (LRK53_05995) | 1382206..1383456 | - | 1251 | WP_051257587.1 | oligosaccharide flippase family protein | - |
| LRK53_RS06000 (LRK53_06000) | 1383453..1385438 | - | 1986 | WP_051257586.1 | hypothetical protein | - |
| LRK53_RS06005 (LRK53_06005) | 1385438..1387453 | - | 2016 | WP_235642652.1 | tetratricopeptide repeat protein | - |
| LRK53_RS06010 (LRK53_06010) | 1387525..1387980 | - | 456 | WP_027493018.1 | hypothetical protein | VF |
| LRK53_RS06015 (LRK53_06015) | 1388325..1388768 | - | 444 | WP_027493017.1 | hypothetical protein | VF |
| LRK53_RS06020 (LRK53_06020) | 1388922..1389239 | - | 318 | WP_185754656.1 | DUF86 domain-containing protein | - |
| LRK53_RS06025 (LRK53_06025) | 1389308..1389544 | - | 237 | WP_235642561.1 | nucleotidyltransferase domain-containing protein | - |
| LRK53_RS06030 (LRK53_06030) | 1389569..1390297 | - | 729 | WP_051257585.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| LRK53_RS06035 (LRK53_06035) | 1390290..1390760 | - | 471 | WP_235642562.1 | helix-turn-helix domain-containing protein | - |
| LRK53_RS06040 (LRK53_06040) | 1390866..1391105 | - | 240 | WP_051257583.1 | HigA family addiction module antitoxin | - |
| LRK53_RS06045 (LRK53_06045) | 1391176..1391316 | - | 141 | Protein_1202 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LRK53_RS06050 (LRK53_06050) | 1391480..1391866 | - | 387 | WP_037089861.1 | nucleotidyltransferase domain-containing protein | - |
| LRK53_RS06055 (LRK53_06055) | 1392134..1392748 | + | 615 | WP_027493013.1 | AbiEi antitoxin N-terminal domain-containing protein | Antitoxin Detail |
| LRK53_RS06060 (LRK53_06060) | 1392773..1393636 | + | 864 | WP_037089858.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| LRK53_RS06065 (LRK53_06065) | 1393835..1395964 | + | 2130 | WP_027493012.1 | S9 family peptidase | - |
| LRK53_RS06070 (LRK53_06070) | 1396666..1397082 | + | 417 | WP_235642563.1 | nucleotidyltransferase family protein | - |
| LRK53_RS06075 (LRK53_06075) | 1397702..1398556 | - | 855 | WP_051257627.1 | 5'-3' exonuclease H3TH domain-containing protein | - |
| LRK53_RS06080 (LRK53_06080) | 1398604..1399173 | - | 570 | WP_027493537.1 | nitroreductase | - |
| LRK53_RS06085 (LRK53_06085) | 1399235..1399651 | - | 417 | WP_027493536.1 | cytidine deaminase | - |
| LRK53_RS06090 (LRK53_06090) | 1399777..1400880 | + | 1104 | WP_027493535.1 | NAD(P) transhydrogenase subunit alpha | - |
| LRK53_RS06095 (LRK53_06095) | 1401101..1401640 | - | 540 | WP_027493534.1 | DUF3106 domain-containing protein | - |
| LRK53_RS06100 (LRK53_06100) | 1401644..1402069 | - | 426 | WP_027493533.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|