NZ_CP0889101..188969

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 188969 bp
Accession: NZ_CP088910        Location: 1..188969         Organism: Rhodococcus qingshengii strain VT6       Replicon: plasmid pLP2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LRL17_RS33610 (LRL17_33610) 22..1125 + 1104 WP_231783893.1 hypothetical protein -
LRL17_RS33615 (LRL17_33615) 1460..3244 + 1785 WP_231783874.1 hypothetical protein -
LRL17_RS33620 (LRL17_33620) 3687..4004 + 318 WP_082920765.1 hypothetical protein -
LRL17_RS33625 (LRL17_33625) 4210..4575 - 366 WP_231783875.1 hypothetical protein -
LRL17_RS33630 (LRL17_33630) 4708..5862 - 1155 WP_231783876.1 hypothetical protein -
LRL17_RS33635 (LRL17_33635) 5912..6967 - 1056 WP_082661392.1 IS30 family transposase ISLxx5 Transposase
LRL17_RS33640 (LRL17_33640) 7130..7471 - 342 Protein_6 IS30 family transposase ISLxx5 Transposase
LRL17_RS33645 (LRL17_33645) 7483..7812 - 330 WP_231783877.1 hypothetical protein -
LRL17_RS33650 (LRL17_33650) 8559..9146 + 588 WP_064444952.1 hypothetical protein -
LRL17_RS33655 (LRL17_33655) 9215..10498 + 1284 WP_003945410.1 IS256 family transposase ISArsp4 Transposase
LRL17_RS33660 (LRL17_33660) 10617..12374 - 1758 WP_064444950.1 Arsenical pump-driving ATPase VF
LRL17_RS33665 (LRL17_33665) 12391..12798 - 408 WP_125053164.1 arsenite efflux transporter metallochaperone ArsD -
LRL17_RS33670 (LRL17_33670) 12859..13269 - 411 WP_064444948.1 low molecular weight phosphatase family protein -
LRL17_RS33675 (LRL17_33675) 13297..14283 - 987 WP_064444947.1 thioredoxin-disulfide reductase -
LRL17_RS33680 (LRL17_33680) 14325..14741 - 417 WP_064444946.1 arsenate reductase ArsC -
LRL17_RS33685 (LRL17_33685) 14783..15436 - 654 WP_064444971.1 arsenate reductase ArsC -
LRL17_RS33690 (LRL17_33690) 15465..16562 - 1098 WP_125053166.1 ACR3 family arsenite efflux transporter -
LRL17_RS33695 (LRL17_33695) 16559..16945 - 387 WP_064444944.1 metalloregulator ArsR/SmtB family transcription factor -
LRL17_RS33700 (LRL17_33700) 17474..17932 - 459 WP_064444942.1 heavy metal-responsive transcriptional regulator -
LRL17_RS33705 (LRL17_33705) 18236..18616 + 381 WP_064444941.1 metalloregulator ArsR/SmtB family transcription factor -
LRL17_RS33710 (LRL17_33710) 18609..20567 + 1959 WP_064444970.1 cation-translocating P-type ATPase -
LRL17_RS33715 (LRL17_33715) 20564..21079 + 516 WP_064444940.1 Lipoprotein signal peptidase VF
LRL17_RS33720 (LRL17_33720) 21079..21513 + 435 WP_164490663.1 DUF3703 domain-containing protein -
LRL17_RS33725 (LRL17_33725) 21510..22105 + 596 Protein_23 cadmium resistance transporter -
LRL17_RS33730 (LRL17_33730) 22858..23883 + 1026 WP_064444937.1 bile acid:sodium symporter -
LRL17_RS33735 (LRL17_33735) 23899..24783 - 885 WP_064444969.1 metalloregulator ArsR/SmtB family transcription factor -
LRL17_RS33740 (LRL17_33740) 24883..26235 + 1353 WP_125053170.1 NAD(P)-binding domain-containing protein -
LRL17_RS33745 (LRL17_33745) 26246..27484 + 1239 WP_125053172.1 MFS transporter -
LRL17_RS33750 (LRL17_33750) 27501..28571 + 1071 WP_125053174.1 NAD(P)/FAD-dependent oxidoreductase -
LRL17_RS33755 (LRL17_33755) 29191..30177 - 987 WP_125053176.1 DUF2971 domain-containing protein -
LRL17_RS33760 (LRL17_33760) 30384..31313 + 930 Protein_30 IS3 family transposase -
LRL17_RS33765 (LRL17_33765) 31324..32673 - 1350 WP_231783878.1 IS30 family transposase ISPa37 Transposase
LRL17_RS33770 (LRL17_33770) 32792..33088 + 297 WP_231783879.1 IS3 family transposase ISTesp3 Transposase
LRL17_RS33775 (LRL17_33775) 33274..34458 + 1185 WP_019747378.1 Ig-like domain-containing protein -
LRL17_RS33780 (LRL17_33780) 34858..35217 + 360 WP_019747377.1 BlaI/MecI/CopY family transcriptional regulator -
LRL17_RS33785 (LRL17_33785) 35214..36161 + 948 WP_019747376.1 M56 family metallopeptidase -
LRL17_RS33790 (LRL17_33790) 36401..37630 - 1230 WP_051720982.1 prolipoprotein diacylglyceryl transferase -
LRL17_RS33795 (LRL17_33795) 38232..38981 + 750 WP_051720985.1 thioesterase -
LRL17_RS33800 (LRL17_33800) 39131..40312 - 1182 WP_030537784.1 Signal transduction histidine-protein kinase BaeS VF
LRL17_RS33805 (LRL17_33805) 40309..41067 - 759 WP_030537785.1 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP VF
LRL17_RS33810 (LRL17_33810) 41208..41477 + 270 WP_030537786.1 membrane protein -
LRL17_RS33815 (LRL17_33815) 41559..43142 + 1584 WP_030537787.1 multicopper oxidase family protein -
LRL17_RS33820 (LRL17_33820) 43657..43884 + 228 WP_030537788.1 heavy metal-associated domain-containing protein -
LRL17_RS33825 (LRL17_33825) 43933..46236 + 2304 WP_047270630.1 heavy metal translocating P-type ATPase -
LRL17_RS33830 (LRL17_33830) 46600..49065 + 2466 WP_064444886.1 heavy metal translocating P-type ATPase -
LRL17_RS33835 (LRL17_33835) 49102..49785 + 684 WP_064444885.1 DUF305 domain-containing protein -
LRL17_RS33840 (LRL17_33840) 50624..51071 - 448 Protein_46 cytochrome c biogenesis protein CcsA -
LRL17_RS33845 (LRL17_33845) 51266..51907 - 642 WP_164490665.1 TlpA disulfide reductase family protein -
LRL17_RS33850 (LRL17_33850) 52038..52751 - 714 WP_084326704.1 M23 family metallopeptidase -
LRL17_RS33855 (LRL17_33855) 53001..54523 - 1523 Protein_49 apolipoprotein N-acyltransferase -
LRL17_RS33860 (LRL17_33860) 54892..57066 + 2175 WP_231783880.1 MMPL family transporter -
LRL17_RS33865 (LRL17_33865) 57196..58980 + 1785 WP_125053184.1 N-acetylmuramoyl-L-alanine amidase -
LRL17_RS33870 (LRL17_33870) 59149..59625 - 477 WP_125053186.1 hypothetical protein -
LRL17_RS33875 (LRL17_33875) 60248..61292 - 1045 Protein_53 IS110 family transposase IS1547 Transposase
LRL17_RS33880 (LRL17_33880) 61512..62792 - 1281 WP_030537341.1 IS256 family transposase ISArsp4 Transposase
LRL17_RS33885 (LRL17_33885) 62783..63160 + 378 Protein_55 DMT family transporter -
LRL17_RS33890 (LRL17_33890) 63372..63764 + 393 WP_231783881.1 DMT family transporter -
LRL17_RS33895 (LRL17_33895) 63952..64509 - 558 WP_125053190.1 hypothetical protein -
LRL17_RS33900 (LRL17_33900) 64588..66308 - 1721 Protein_58 cytochrome c oxidase subunit I -
LRL17_RS33905 (LRL17_33905) 66626..67072 - 447 WP_064444962.1 rhodanese-like domain-containing protein -
LRL17_RS33910 (LRL17_33910) 67653..69236 - 1584 WP_125053192.1 Peptidoglycan endopeptidase RipA VF
LRL17_RS33915 (LRL17_33915) 69541..69864 - 324 WP_125053194.1 hypothetical protein -
LRL17_RS33920 (LRL17_33920) 70084..70329 + 246 WP_125053196.1 hypothetical protein -
LRL17_RS33925 (LRL17_33925) 70642..71004 - 363 WP_064444960.1 metalloregulator ArsR/SmtB family transcription factor -
LRL17_RS33930 (LRL17_33930) 71104..73104 + 2001 WP_231783882.1 heavy metal translocating P-type ATPase -
LRL17_RS33935 (LRL17_33935) 73737..74390 - 654 WP_064444875.1 PhoU domain-containing protein -
LRL17_RS33940 (LRL17_33940) 74624..74851 - 228 WP_231783883.1 ANTAR domain-containing protein -
LRL17_RS33945 (LRL17_33945) 76349..76567 - 219 WP_084326696.1 hypothetical protein -
LRL17_RS33950 (LRL17_33950) 77083..78069 - 987 WP_064444871.1 Cytochrome c biogenesis protein CcsA VF
LRL17_RS33955 (LRL17_33955) 78771..79423 + 653 Protein_69 CBS domain-containing protein -
LRL17_RS33960 (LRL17_33960) 79479..79883 + 405 WP_064444868.1 MerR family transcriptional regulator -
LRL17_RS33965 (LRL17_33965) 79880..80188 + 309 WP_064444867.1 hypothetical protein -
LRL17_RS33970 (LRL17_33970) 80325..80552 - 228 WP_082920753.1 DUF4229 domain-containing protein -
LRL17_RS33975 (LRL17_33975) 80820..81461 + 642 WP_064444865.1 TlpA disulfide reductase family protein -
LRL17_RS33980 (LRL17_33980) 81488..82102 + 615 WP_064444864.1 TlpA disulfide reductase family protein -
LRL17_RS33985 (LRL17_33985) 82099..82905 + 807 WP_064444863.1 cytochrome c biogenesis CcdA family protein -
LRL17_RS33990 (LRL17_33990) 82953..84533 + 1581 WP_125053621.1 cytochrome c biogenesis protein ResB -
LRL17_RS33995 (LRL17_33995) 84530..86143 + 1614 WP_011133456.1 apolipoprotein N-acyltransferase -
LRL17_RS34000 (LRL17_34000) 86236..86988 + 753 WP_030538026.1 DUF3105 domain-containing protein -
LRL17_RS34005 (LRL17_34005) 87020..87724 + 705 WP_095996212.1 DUF305 domain-containing protein -
LRL17_RS34010 (LRL17_34010) 87783..88718 - 936 WP_030538024.1 cytochrome c oxidase assembly protein -
LRL17_RS34015 (LRL17_34015) 88761..89303 - 543 WP_225320455.1 copper resistance protein CopC -
LRL17_RS34020 (LRL17_34020) 89487..90143 + 657 WP_030538023.1 thioredoxin domain-containing protein -
LRL17_RS34025 (LRL17_34025) 90140..90802 + 663 WP_030538022.1 vitamin K epoxide reductase family protein -
LRL17_RS34030 (LRL17_34030) 90946..91137 + 192 WP_030538021.1 antitoxin -
LRL17_RS34035 (LRL17_34035) 91270..91809 - 540 WP_011133446.1 hypothetical protein -
LRL17_RS34040 (LRL17_34040) 91839..93596 - 1758 WP_011133445.1 cytochrome c oxidase subunit I -
LRL17_RS34045 (LRL17_34045) 93714..94664 - 951 WP_011133444.1 M56 family metallopeptidase -
LRL17_RS34050 (LRL17_34050) 94665..95024 - 360 WP_011133443.1 BlaI/MecI/CopY family transcriptional regulator -
LRL17_RS34055 (LRL17_34055) 95057..95938 - 882 WP_225320456.1 M23 family metallopeptidase -
LRL17_RS34680 96071..96427 - 357 WP_269456417.1 cytochrome c oxidase assembly protein -
LRL17_RS34685 96424..98019 - 1596 WP_269456418.1 bifunctional copper resistance protein CopD/cytochrome c oxidase assembly protein -
LRL17_RS34065 (LRL17_34065) 98199..99119 + 921 WP_030538018.1 cation diffusion facilitator family transporter -
LRL17_RS34070 (LRL17_34070) 99170..99652 + 483 WP_051721011.1 Lipoprotein signal peptidase VF
LRL17_RS34075 (LRL17_34075) 99898..100959 + 1062 WP_011133438.1 multicopper oxidase domain-containing protein -
LRL17_RS34080 (LRL17_34080) 101088..102221 + 1134 WP_037127376.1 metal transporter -
LRL17_RS34085 (LRL17_34085) 102218..102637 + 420 WP_011133436.1 Rieske (2Fe-2S) protein -
LRL17_RS34090 (LRL17_34090) 102727..103446 + 720 WP_037127360.1 TIGR02206 family membrane protein -
LRL17_RS34095 (LRL17_34095) 103758..104087 + 330 WP_030538015.1 metalloregulator ArsR/SmtB family transcription factor -
LRL17_RS34100 (LRL17_34100) 104115..104507 + 393 WP_011133433.1 DUF3703 domain-containing protein -
LRL17_RS34105 (LRL17_34105) 104500..106647 + 2148 WP_011133432.1 putative cation-transporting ATPase G VF
LRL17_RS34110 (LRL17_34110) 106801..106908 - 108 Protein_101 ArsR family transcriptional regulator -
LRL17_RS34115 (LRL17_34115) 107081..107878 - 798 WP_231783884.1 hypothetical protein -
LRL17_RS34120 (LRL17_34120) 107878..109848 - 1971 WP_231783885.1 hypothetical protein -
LRL17_RS34125 (LRL17_34125) 109877..110179 - 303 WP_011133429.1 type II toxin-antitoxin system PemK/MazF family toxin Toxin Detail
LRL17_RS34130 (LRL17_34130) 110180..110395 - 216 WP_064444958.1 hypothetical protein Antitoxin Detail
LRL17_RS34135 (LRL17_34135) 110535..110723 - 189 WP_082920751.1 hypothetical protein -
LRL17_RS34140 (LRL17_34140) 110922..112217 - 1296 WP_149357432.1 AAA family ATPase -
LRL17_RS34145 (LRL17_34145) 112288..113475 - 1188 WP_149357433.1 hypothetical protein -
LRL17_RS34150 (LRL17_34150) 113472..113666 - 195 WP_231783855.1 hypothetical protein -
LRL17_RS34155 (LRL17_34155) 113663..114901 - 1239 WP_231783886.1 VWA-like domain-containing protein -
LRL17_RS34160 (LRL17_34160) 114898..116001 - 1104 Protein_111 AAA family ATPase -
LRL17_RS34165 (LRL17_34165) 116254..116430 + 177 WP_021334659.1 hypothetical protein -
LRL17_RS34170 (LRL17_34170) 116518..117222 + 705 WP_021334660.1 hypothetical protein -
LRL17_RS34175 (LRL17_34175) 117209..118003 + 795 WP_037127351.1 hypothetical protein -
LRL17_RS34180 (LRL17_34180) 118048..118767 - 720 WP_021334662.1 hypothetical protein -
LRL17_RS34185 (LRL17_34185) 118767..119630 - 864 WP_021334663.1 RAMP superfamily CRISPR-associated protein -
LRL17_RS34190 (LRL17_34190) 119627..120064 - 438 WP_021334664.1 hypothetical protein -
LRL17_RS34195 (LRL17_34195) 120064..120735 - 672 WP_021334665.1 hypothetical protein -
LRL17_RS34200 (LRL17_34200) 120833..121522 - 690 WP_230587723.1 MinD/ParA family protein -
LRL17_RS34205 (LRL17_34205) 121483..122157 - 675 WP_225320437.1 hypothetical protein -
LRL17_RS34210 (LRL17_34210) 122794..123645 + 852 WP_021334666.1 phosphoadenosine phosphosulfate reductase family protein -
LRL17_RS34215 (LRL17_34215) 123667..124230 - 564 WP_030538008.1 hypothetical protein -
LRL17_RS34220 (LRL17_34220) 124542..125435 - 894 WP_021334669.1 hypothetical protein -
LRL17_RS34225 (LRL17_34225) 125824..126246 - 423 WP_051721009.1 hypothetical protein -
LRL17_RS34230 (LRL17_34230) 126250..126582 - 333 WP_225320464.1 HNH endonuclease family protein -
LRL17_RS34235 (LRL17_34235) 126742..127917 + 1176 WP_021334719.1 tyrosine-type recombinase/integrase -
LRL17_RS34240 (LRL17_34240) 128127..130070 + 1944 WP_231783780.1 site-specific integrase -
LRL17_RS34245 (LRL17_34245) 130089..130487 + 399 WP_231783887.1 DUF6262 family protein -
LRL17_RS34250 (LRL17_34250) 130384..131286 - 903 WP_231783888.1 HNH endonuclease family protein -
LRL17_RS34255 (LRL17_34255) 131286..131810 - 525 WP_215515681.1 hypothetical protein -
LRL17_RS34260 (LRL17_34260) 132221..134707 - 2487 WP_011133408.1 site-specific integrase -
LRL17_RS34265 (LRL17_34265) 134704..135963 - 1260 WP_011133407.1 site-specific integrase -
LRL17_RS34270 (LRL17_34270) 136457..137167 - 711 WP_167548986.1 prepilin peptidase -
LRL17_RS34275 (LRL17_34275) 137241..137780 - 540 WP_134771770.1 hypothetical protein -
LRL17_RS34280 (LRL17_34280) 138371..138700 - 330 WP_030537893.1 hypothetical protein -
LRL17_RS34285 (LRL17_34285) 138734..140959 - 2226 WP_051721005.1 FtsK/SpoIIIE domain-containing protein -
LRL17_RS34290 (LRL17_34290) 140956..141171 - 216 WP_218694649.1 hypothetical protein -
LRL17_RS34295 (LRL17_34295) 141635..142243 - 609 WP_021334519.1 hypothetical protein -
LRL17_RS34300 (LRL17_34300) 142260..143903 - 1644 WP_021334518.1 M23 family metallopeptidase -
LRL17_RS34305 (LRL17_34305) 143910..146153 - 2244 WP_021334517.1 hypothetical protein -
LRL17_RS34310 (LRL17_34310) 146150..148690 - 2541 WP_021334516.1 ATP-binding protein -
LRL17_RS34315 (LRL17_34315) 148690..149334 - 645 WP_021334515.1 hypothetical protein -
LRL17_RS34320 (LRL17_34320) 149394..149750 - 357 WP_021334514.1 hypothetical protein -
LRL17_RS34325 (LRL17_34325) 149771..150880 - 1110 WP_021334513.1 conjugal transfer protein -
LRL17_RS34330 (LRL17_34330) 150877..151206 - 330 WP_021334512.1 hypothetical protein -
LRL17_RS34335 (LRL17_34335) 151538..152389 + 852 WP_021334511.1 sigma-70 family RNA polymerase sigma factor -
LRL17_RS34340 (LRL17_34340) 152429..153859 + 1431 WP_021334510.1 cutinase family protein -
LRL17_RS34345 (LRL17_34345) 153958..154095 - 138 WP_211919437.1 hypothetical protein -
LRL17_RS34350 (LRL17_34350) 154171..155136 - 966 WP_134771769.1 hypothetical protein -
LRL17_RS34355 (LRL17_34355) 155133..155648 - 516 WP_021334508.1 hypothetical protein -
LRL17_RS34360 (LRL17_34360) 155671..155931 - 261 WP_021334507.1 hypothetical protein -
LRL17_RS34365 (LRL17_34365) 155928..156548 - 621 WP_021334506.1 hypothetical protein -
LRL17_RS34370 (LRL17_34370) 157128..157658 - 531 WP_021334504.1 hypothetical protein -
LRL17_RS34375 (LRL17_34375) 157669..158496 - 828 WP_021334503.1 Peptidoglycan endopeptidase RipB VF
LRL17_RS34380 (LRL17_34380) 158960..160273 + 1314 WP_030538128.1 IS256 family transposase IS666 Transposase
LRL17_RS34385 (LRL17_34385) 160329..160838 - 510 WP_134771765.1 hypothetical protein -
LRL17_RS34390 (LRL17_34390) 161770..163053 - 1284 WP_231783818.1 IS256 family transposase ISArsp4 Transposase
LRL17_RS34395 (LRL17_34395) 163099..163308 - 210 WP_231783889.1 hypothetical protein -
LRL17_RS34400 (LRL17_34400) 163428..166523 - 3096 WP_269456423.1 LysM peptidoglycan-binding domain-containing protein -
LRL17_RS34690 167057..167182 - 126 WP_269456422.1 hypothetical protein -
LRL17_RS34405 (LRL17_34405) 167280..167735 - 456 WP_211919433.1 pilus assembly protein TadG-related protein -
LRL17_RS34695 167732..168349 - 618 WP_021334466.1 TadE/TadG family type IV pilus assembly protein -
LRL17_RS34420 (LRL17_34420) 168585..169010 - 426 WP_021334464.1 TadE/TadG family type IV pilus assembly protein -
LRL17_RS34425 (LRL17_34425) 169038..169184 - 147 WP_021334463.1 hypothetical protein -
LRL17_RS34430 (LRL17_34430) 169314..169547 - 234 WP_021334462.1 hypothetical protein -
LRL17_RS34435 (LRL17_34435) 169783..170688 - 906 WP_021334461.1 type II secretion system F family protein -
LRL17_RS34440 (LRL17_34440) 170685..171572 - 888 WP_021334460.1 type II secretion system F family protein -
LRL17_RS34445 (LRL17_34445) 171575..173263 - 1689 WP_211919431.1 CpaF/VirB11 family protein -
LRL17_RS34450 (LRL17_34450) 173260..174108 - 849 WP_021334457.1 hypothetical protein -
LRL17_RS34455 (LRL17_34455) 174113..174820 - 708 WP_021334456.1 SAF domain-containing protein -
LRL17_RS34460 (LRL17_34460) 174826..175335 - 510 WP_211919429.1 hypothetical protein -
LRL17_RS34465 (LRL17_34465) 176226..176918 + 693 WP_031332140.1 hypothetical protein -
LRL17_RS34470 (LRL17_34470) 177775..178737 + 963 WP_021334451.1 Chromosome partitioning protein ParA VF
LRL17_RS34475 (LRL17_34475) 178734..179432 + 699 WP_134771763.1 hypothetical protein -
LRL17_RS34480 (LRL17_34480) 179884..180186 + 303 WP_021334449.1 hypothetical protein -
LRL17_RS34485 (LRL17_34485) 180405..185741 + 5337 WP_231783891.1 telomere-binding protein -
LRL17_RS34490 (LRL17_34490) 185741..186352 + 612 WP_021334447.1 terminal protein -
LRL17_RS34495 (LRL17_34495) 186352..186981 + 630 WP_021334446.1 hypothetical protein -
LRL17_RS34500 (LRL17_34500) 187054..187572 - 519 WP_021334445.1 hypothetical protein -
LRL17_RS34505 (LRL17_34505) 187968..188969 + 1002 WP_231783892.1 RNA-guided endonuclease TnpB family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance