MGE detailed information
MGE type: IScluster/Tn MGE length: 5552 bp
Accession: NZ_CP088909 Location: 265285..270836 Organism: Rhodococcus qingshengii strain VT6 Replicon: plasmid pLP1
Accession: NZ_CP088909 Location: 265285..270836 Organism: Rhodococcus qingshengii strain VT6 Replicon: plasmid pLP1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LRL17_RS32305 (LRL17_32305) | 261049..261648 | + | 600 | WP_073513841.1 | hypothetical protein | - |
| LRL17_RS32310 (LRL17_32310) | 262001..262678 | - | 678 | WP_231783866.1 | transposase | - |
| LRL17_RS32315 (LRL17_32315) | 262755..263846 | - | 1092 | WP_003941566.1 | hypothetical protein | - |
| LRL17_RS32320 (LRL17_32320) | 264375..265274 | - | 900 | WP_231783826.1 | ISL3 family transposase | - |
| LRL17_RS32325 (LRL17_32325) | 265285..266350 | - | 1066 | Protein_254 | IS630 family transposase ISMsm5 | Transposase |
| LRL17_RS32330 (LRL17_32330) | 266363..266779 | - | 417 | WP_073513843.1 | ISL3 family transposase ISAar15 | Transposase |
| LRL17_RS32335 (LRL17_32335) | 267678..267890 | + | 213 | WP_003943374.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| LRL17_RS32340 (LRL17_32340) | 267887..268243 | + | 357 | WP_003943396.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LRL17_RS32345 (LRL17_32345) | 268441..270117 | + | 1677 | WP_231783827.1 | IS21 family transposase ISLxx3 | Transposase |
| LRL17_RS32350 (LRL17_32350) | 270132..270803 | + | 672 | Protein_259 | IS21 family transposase ISLxx3 | Transposase |
| LRL17_RS32355 (LRL17_32355) | 270850..272250 | - | 1401 | WP_231783867.1 | integrase | - |
| LRL17_RS32360 (LRL17_32360) | 272140..272484 | + | 345 | WP_073513720.1 | hypothetical protein | - |
| LRL17_RS32365 (LRL17_32365) | 272501..272818 | - | 318 | WP_003943376.1 | helix-turn-helix transcriptional regulator | - |
| LRL17_RS32370 (LRL17_32370) | 272815..273552 | - | 738 | Protein_263 | site-specific integrase | - |
| LRL17_RS32375 (LRL17_32375) | 273573..274013 | + | 441 | Protein_264 | DDE-type integrase/transposase/recombinase | - |
| LRL17_RS32380 (LRL17_32380) | 274984..275256 | - | 273 | WP_003943358.1 | DUF4235 domain-containing protein | - |
| LRL17_RS32385 (LRL17_32385) | 275253..275549 | - | 297 | WP_080552793.1 | DUF3618 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|