MGE detailed information
MGE type: Conjugative plasmid MGE length: 109937 bp
Accession: NZ_CP088103 Location: 1..109937 Organism: Bradyrhizobium japonicum strain CC829 Replicon: plasmid pCC829_3
Accession: NZ_CP088103 Location: 1..109937 Organism: Bradyrhizobium japonicum strain CC829 Replicon: plasmid pCC829_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Location: 1..1188 (1188 bp)
Type: VF
Protein ID: WP_231146005.1
Type: VF
Protein ID: WP_231146005.1
Location: 1261..2280 (1020 bp)
Type: Others
Protein ID: WP_231146006.1
Type: Others
Protein ID: WP_231146006.1
Location: 2448..3755 (1308 bp)
Type: Others
Protein ID: WP_231146007.1
Type: Others
Protein ID: WP_231146007.1
Location: 3986..4234 (249 bp)
Type: Others
Protein ID: WP_231146008.1
Type: Others
Protein ID: WP_231146008.1
Location: 4231..4644 (414 bp)
Type: Others
Protein ID: WP_231146009.1
Type: Others
Protein ID: WP_231146009.1
Location: 6468..6518 (51 bp)
Type: Others
Protein ID: Protein_8
Type: Others
Protein ID: Protein_8
Location: 6531..6815 (285 bp)
Type: Others
Protein ID: WP_231146013.1
Type: Others
Protein ID: WP_231146013.1
Location: 6875..8053 (1179 bp)
Type: Others
Protein ID: WP_231146014.1
Type: Others
Protein ID: WP_231146014.1
Location: 8150..9091 (942 bp)
Type: Others
Protein ID: WP_231146015.1
Type: Others
Protein ID: WP_231146015.1
Location: 9093..9785 (693 bp)
Type: Others
Protein ID: WP_231146016.1
Type: Others
Protein ID: WP_231146016.1
Location: 14945..15391 (447 bp)
Type: Others
Protein ID: Protein_23
Type: Others
Protein ID: Protein_23
Location: 16417..17096 (680 bp)
Type: Others
Protein ID: Protein_25
Type: Others
Protein ID: Protein_25
Location: 17456..18112 (657 bp)
Type: Others
Protein ID: WP_231146020.1
Type: Others
Protein ID: WP_231146020.1
Location: 18172..18504 (333 bp)
Type: Transposase
Protein ID: Protein_27
Type: Transposase
Protein ID: Protein_27
Location: 25197..26480 (1284 bp)
Type: Others
Protein ID: WP_231145945.1
Type: Others
Protein ID: WP_231145945.1
Location: 26705..27163 (459 bp)
Type: Transposase
Protein ID: Protein_33
Type: Transposase
Protein ID: Protein_33
Location: 27343..28023 (681 bp)
Type: Others
Protein ID: WP_231146022.1
Type: Others
Protein ID: WP_231146022.1
Location: 29152..30375 (1224 bp)
Type: Others
Protein ID: WP_231146024.1
Type: Others
Protein ID: WP_231146024.1
Location: 30372..31340 (969 bp)
Type: VF
Protein ID: WP_231146025.1
Type: VF
Protein ID: WP_231146025.1
Location: 31337..32294 (958 bp)
Type: VF
Protein ID: Protein_38
Type: VF
Protein ID: Protein_38
Location: 34504..35388 (885 bp)
Type: Transposase
Protein ID: WP_231146026.1
Type: Transposase
Protein ID: WP_231146026.1
Location: 35400..36605 (1206 bp)
Type: Transposase
Protein ID: WP_231146027.1
Type: Transposase
Protein ID: WP_231146027.1
Location: 39150..40532 (1383 bp)
Type: Transposase
Protein ID: WP_231146040.1
Type: Transposase
Protein ID: WP_231146040.1
Location: 42390..42788 (399 bp)
Type: Others
Protein ID: WP_231146030.1
Type: Others
Protein ID: WP_231146030.1
Location: 43052..43468 (417 bp)
Type: Others
Protein ID: WP_231146031.1
Type: Others
Protein ID: WP_231146031.1
Location: 44218..44841 (624 bp)
Type: Others
Protein ID: WP_231146032.1
Type: Others
Protein ID: WP_231146032.1
Location: 45206..45910 (705 bp)
Type: Others
Protein ID: WP_231146033.1
Type: Others
Protein ID: WP_231146033.1
Location: 52424..52684 (261 bp)
Type: Others
Protein ID: WP_231146037.1
Type: Others
Protein ID: WP_231146037.1
Location: 52689..52904 (216 bp)
Type: Others
Protein ID: WP_231146038.1
Type: Others
Protein ID: WP_231146038.1
Location: 52891..54843 (1953 bp)
Type: VF
Protein ID: WP_231146039.1
Type: VF
Protein ID: WP_231146039.1
Location: 55094..55438 (345 bp)
Type: Others
Protein ID: WP_231145970.1
Type: Others
Protein ID: WP_231145970.1
Location: 56347..56715 (369 bp)
Type: Others
Protein ID: WP_231145972.1
Type: Others
Protein ID: WP_231145972.1
Location: 58658..58942 (285 bp)
Type: Others
Protein ID: WP_231144118.1
Type: Others
Protein ID: WP_231144118.1
Location: 58976..59794 (819 bp)
Type: Others
Protein ID: Protein_63
Type: Others
Protein ID: Protein_63
Location: 60506..61276 (771 bp)
Type: VF
Protein ID: WP_231145974.1
Type: VF
Protein ID: WP_231145974.1
Location: 61610..61807 (198 bp)
Type: Others
Protein ID: Protein_66
Type: Others
Protein ID: Protein_66
Location: 63364..65541 (2178 bp)
Type: Others
Protein ID: WP_231145976.1
Type: Others
Protein ID: WP_231145976.1
Location: 68406..69518 (1113 bp)
Type: Transposase
Protein ID: Protein_71
Type: Transposase
Protein ID: Protein_71
Location: 69596..70633 (1038 bp)
Type: Transposase
Protein ID: WP_231145979.1
Type: Transposase
Protein ID: WP_231145979.1
Location: 70901..71047 (147 bp)
Type: Others
Protein ID: Protein_73
Type: Others
Protein ID: Protein_73
Location: 71544..72311 (768 bp)
Type: Others
Protein ID: Protein_74
Type: Others
Protein ID: Protein_74
Location: 75601..75978 (378 bp)
Type: Transposase
Protein ID: Protein_79
Type: Transposase
Protein ID: Protein_79
Location: 76150..76383 (234 bp)
Type: Transposase
Protein ID: Protein_80
Type: Transposase
Protein ID: Protein_80
Location: 81743..85051 (3309 bp)
Type: Relaxase
Protein ID: WP_231145984.1
Type: Relaxase
Protein ID: WP_231145984.1
Location: 85111..85647 (537 bp)
Type: Others
Protein ID: WP_231145985.1
Type: Others
Protein ID: WP_231145985.1
Location: 85568..86140 (573 bp)
Type: Others
Protein ID: Protein_88
Type: Others
Protein ID: Protein_88
Location: 86212..86823 (612 bp)
Type: Others
Protein ID: WP_231145986.1
Type: Others
Protein ID: WP_231145986.1
Location: 88256..88498 (243 bp)
Type: Transposase
Protein ID: Protein_94
Type: Transposase
Protein ID: Protein_94
Location: 91188..91369 (182 bp)
Type: Others
Protein ID: Protein_96
Type: Others
Protein ID: Protein_96
Location: 91415..91516 (102 bp)
Type: Transposase
Protein ID: Protein_97
Type: Transposase
Protein ID: Protein_97
Location: 97659..98788 (1130 bp)
Type: Transposase
Protein ID: Protein_102
Type: Transposase
Protein ID: Protein_102
Location: 4664..5734 (1071 bp)
Type: Others
Protein ID: WP_231146010.1
Type: Others
Protein ID: WP_231146010.1
Location: 5737..6123 (387 bp)
Type: Toxin
Protein ID: WP_231146011.1
Type: Toxin
Protein ID: WP_231146011.1
Location: 6123..6377 (255 bp)
Type: Antitoxin
Protein ID: WP_231146012.1
Type: Antitoxin
Protein ID: WP_231146012.1
Location: 9964..10156 (193 bp)
Type: Others
Protein ID: Protein_13
Type: Others
Protein ID: Protein_13
Location: 10210..10567 (358 bp)
Type: Others
Protein ID: Protein_14
Type: Others
Protein ID: Protein_14
Location: 10528..10722 (195 bp)
Type: Others
Protein ID: WP_231146017.1
Type: Others
Protein ID: WP_231146017.1
Location: 10726..11446 (721 bp)
Type: Others
Protein ID: Protein_16
Type: Others
Protein ID: Protein_16
Location: 11473..11835 (363 bp)
Type: Others
Protein ID: WP_231146018.1
Type: Others
Protein ID: WP_231146018.1
Location: 11977..12468 (492 bp)
Type: Transposase
Protein ID: Protein_18
Type: Transposase
Protein ID: Protein_18
Location: 12603..13730 (1128 bp)
Type: Others
Protein ID: Protein_19
Type: Others
Protein ID: Protein_19
Location: 13970..14356 (387 bp)
Type: Others
Protein ID: WP_231145987.1
Type: Others
Protein ID: WP_231145987.1
Location: 14353..14514 (162 bp)
Type: Others
Protein ID: WP_231145988.1
Type: Others
Protein ID: WP_231145988.1
Location: 14514..14612 (99 bp)
Type: Others
Protein ID: Protein_22
Type: Others
Protein ID: Protein_22
Location: 15366..16304 (939 bp)
Type: Others
Protein ID: WP_231146019.1
Type: Others
Protein ID: WP_231146019.1
Location: 18928..20262 (1335 bp)
Type: Others
Protein ID: WP_231146021.1
Type: Others
Protein ID: WP_231146021.1
Location: 21109..21990 (882 bp)
Type: Transposase
Protein ID: Protein_29
Type: Transposase
Protein ID: Protein_29
Location: 22411..23640 (1230 bp)
Type: Transposase
Protein ID: WP_231141967.1
Type: Transposase
Protein ID: WP_231141967.1
Location: 23659..24519 (861 bp)
Type: VF
Protein ID: WP_231143676.1
Type: VF
Protein ID: WP_231143676.1
Location: 28442..28876 (435 bp)
Type: Others
Protein ID: WP_231146023.1
Type: Others
Protein ID: WP_231146023.1
Location: 32468..33751 (1284 bp)
Type: Others
Protein ID: WP_231145945.1
Type: Others
Protein ID: WP_231145945.1
Location: 37273..37587 (315 bp)
Type: Others
Protein ID: WP_231146028.1
Type: Others
Protein ID: WP_231146028.1
Location: 38047..38922 (876 bp)
Type: Transposase
Protein ID: Protein_43
Type: Transposase
Protein ID: Protein_43
Location: 40537..40791 (255 bp)
Type: Others
Protein ID: Protein_45
Type: Others
Protein ID: Protein_45
Location: 41125..41754 (630 bp)
Type: VF
Protein ID: WP_231146029.1
Type: VF
Protein ID: WP_231146029.1
Location: 46545..47162 (618 bp)
Type: Others
Protein ID: WP_231146034.1
Type: Others
Protein ID: WP_231146034.1
Location: 47174..48310 (1137 bp)
Type: Others
Protein ID: WP_231146041.1
Type: Others
Protein ID: WP_231146041.1
Location: 48330..48863 (534 bp)
Type: Others
Protein ID: WP_231146035.1
Type: Others
Protein ID: WP_231146035.1
Location: 48860..52168 (3309 bp)
Type: Relaxase
Protein ID: WP_231146036.1
Type: Relaxase
Protein ID: WP_231146036.1
Location: 56017..56205 (189 bp)
Type: Others
Protein ID: WP_231145971.1
Type: Others
Protein ID: WP_231145971.1
Location: 57489..58619 (1131 bp)
Type: Transposase
Protein ID: WP_231145973.1
Type: Transposase
Protein ID: WP_231145973.1
Location: 60009..60199 (191 bp)
Type: Transposase
Protein ID: Protein_64
Type: Transposase
Protein ID: Protein_64
Location: 62496..63092 (597 bp)
Type: Others
Protein ID: WP_231145975.1
Type: Others
Protein ID: WP_231145975.1
Location: 65484..65753 (270 bp)
Type: Others
Protein ID: WP_231145977.1
Type: Others
Protein ID: WP_231145977.1
Location: 66234..67553 (1320 bp)
Type: Others
Protein ID: WP_231145978.1
Type: Others
Protein ID: WP_231145978.1
Location: 72330..74396 (2067 bp)
Type: Others
Protein ID: WP_231145980.1
Type: Others
Protein ID: WP_231145980.1
Location: 74389..74625 (237 bp)
Type: Others
Protein ID: WP_231144201.1
Type: Others
Protein ID: WP_231144201.1
Location: 74649..75125 (477 bp)
Type: Transposase
Protein ID: WP_231144202.1
Type: Transposase
Protein ID: WP_231144202.1
Location: 75290..75556 (267 bp)
Type: Others
Protein ID: WP_231145826.1
Type: Others
Protein ID: WP_231145826.1
Location: 76571..77835 (1265 bp)
Type: Transposase
Protein ID: Protein_81
Type: Transposase
Protein ID: Protein_81
Location: 78042..79049 (1008 bp)
Type: Transposase
Protein ID: WP_231145981.1
Type: Transposase
Protein ID: WP_231145981.1
Location: 79046..80962 (1917 bp)
Type: VF
Protein ID: WP_231145982.1
Type: VF
Protein ID: WP_231145982.1
Location: 80949..81164 (216 bp)
Type: Others
Protein ID: WP_035681106.1
Type: Others
Protein ID: WP_035681106.1
Location: 81169..81465 (297 bp)
Type: Others
Protein ID: WP_231145983.1
Type: Others
Protein ID: WP_231145983.1
Location: 86856..87242 (387 bp)
Type: Others
Protein ID: WP_231145987.1
Type: Others
Protein ID: WP_231145987.1
Location: 87239..87400 (162 bp)
Type: Others
Protein ID: WP_231145988.1
Type: Others
Protein ID: WP_231145988.1
Location: 87400..87498 (99 bp)
Type: Others
Protein ID: Protein_92
Type: Others
Protein ID: Protein_92
Location: 87827..88015 (189 bp)
Type: Transposase
Protein ID: Protein_93
Type: Transposase
Protein ID: Protein_93
Location: 88642..91077 (2436 bp)
Type: Others
Protein ID: WP_231145989.1
Type: Others
Protein ID: WP_231145989.1
Location: 91771..94581 (2811 bp)
Type: Others
Protein ID: WP_231145990.1
Type: Others
Protein ID: WP_231145990.1
Location: 94609..96444 (1836 bp)
Type: Others
Protein ID: WP_231145991.1
Type: Others
Protein ID: WP_231145991.1
Location: 96560..97180 (621 bp)
Type: Others
Protein ID: WP_231145992.1
Type: Others
Protein ID: WP_231145992.1
Location: 97336..97620 (285 bp)
Type: Others
Protein ID: WP_231145993.1
Type: Others
Protein ID: WP_231145993.1
Location: 99409..100707 (1299 bp)
Type: VF
Protein ID: WP_231145994.1
Type: VF
Protein ID: WP_231145994.1
Location: 100720..101172 (453 bp)
Type: Others
Protein ID: WP_231145995.1
Type: Others
Protein ID: WP_231145995.1
Location: 101175..102014 (840 bp)
Type: VF
Protein ID: WP_231145996.1
Type: VF
Protein ID: WP_231145996.1
Location: 102030..102692 (663 bp)
Type: Others
Protein ID: WP_231145997.1
Type: Others
Protein ID: WP_231145997.1
Location: 102735..103886 (1152 bp)
Type: Others
Protein ID: WP_231146042.1
Type: Others
Protein ID: WP_231146042.1
Location: 103910..104095 (186 bp)
Type: Others
Protein ID: WP_231145998.1
Type: Others
Protein ID: WP_231145998.1
Location: 104092..104889 (798 bp)
Type: Others
Protein ID: WP_231145999.1
Type: Others
Protein ID: WP_231145999.1
Location: 104861..107314 (2454 bp)
Type: Others
Protein ID: WP_231146000.1
Type: Others
Protein ID: WP_231146000.1
Location: 107323..107622 (300 bp)
Type: Others
Protein ID: WP_231146001.1
Type: Others
Protein ID: WP_231146001.1
Location: 107615..107992 (378 bp)
Type: Others
Protein ID: WP_231146002.1
Type: Others
Protein ID: WP_231146002.1
Location: 107982..108950 (969 bp)
Type: VF
Protein ID: WP_231146003.1
Type: VF
Protein ID: WP_231146003.1
Location: 109069..109536 (468 bp)
Type: Others
Protein ID: WP_231146004.1
Type: Others
Protein ID: WP_231146004.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BjapCC829_RS49725 (BjapCC829_49725) | 1..1188 | + | 1188 | WP_231146005.1 | Sporulation initiation inhibitor protein Soj | VF |
| BjapCC829_RS49730 (BjapCC829_49730) | 1261..2280 | + | 1020 | WP_231146006.1 | plasmid partitioning protein RepB | - |
| BjapCC829_RS49735 (BjapCC829_49735) | 2448..3755 | + | 1308 | WP_231146007.1 | plasmid replication protein RepC | - |
| BjapCC829_RS49740 (BjapCC829_49740) | 3986..4234 | + | 249 | WP_231146008.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| BjapCC829_RS49745 (BjapCC829_49745) | 4231..4644 | + | 414 | WP_231146009.1 | type II toxin-antitoxin system VapC family toxin | - |
| BjapCC829_RS49750 (BjapCC829_49750) | 4664..5734 | - | 1071 | WP_231146010.1 | tyrosine-type recombinase/integrase | - |
| BjapCC829_RS49755 (BjapCC829_49755) | 5737..6123 | - | 387 | WP_231146011.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BjapCC829_RS49760 (BjapCC829_49760) | 6123..6377 | - | 255 | WP_231146012.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| BjapCC829_RS49765 (BjapCC829_49765) | 6468..6518 | + | 51 | Protein_8 | hypothetical protein | - |
| BjapCC829_RS49770 (BjapCC829_49770) | 6531..6815 | + | 285 | WP_231146013.1 | hypothetical protein | - |
| BjapCC829_RS49775 (BjapCC829_49775) | 6875..8053 | + | 1179 | WP_231146014.1 | TniQ family protein | - |
| BjapCC829_RS49780 (BjapCC829_49780) | 8150..9091 | + | 942 | WP_231146015.1 | DUF1403 family protein | - |
| BjapCC829_RS49785 (BjapCC829_49785) | 9093..9785 | + | 693 | WP_231146016.1 | SMC-Scp complex subunit ScpB | - |
| BjapCC829_RS49790 (BjapCC829_49790) | 9964..10156 | - | 193 | Protein_13 | transposase | - |
| BjapCC829_RS49795 (BjapCC829_49795) | 10210..10567 | - | 358 | Protein_14 | IS4 family transposase | - |
| BjapCC829_RS49800 (BjapCC829_49800) | 10528..10722 | - | 195 | WP_231146017.1 | hypothetical protein | - |
| BjapCC829_RS49805 (BjapCC829_49805) | 10726..11446 | - | 721 | Protein_16 | 7-cyano-7-deazaguanine synthase QueC | - |
| BjapCC829_RS49810 (BjapCC829_49810) | 11473..11835 | - | 363 | WP_231146018.1 | 6-carboxytetrahydropterin synthase QueD | - |
| BjapCC829_RS49815 (BjapCC829_49815) | 11977..12468 | - | 492 | Protein_18 | IS21 family transposase ISBj11 | Transposase |
| BjapCC829_RS49820 (BjapCC829_49820) | 12603..13730 | - | 1128 | Protein_19 | IS3-like element ISRj2 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
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Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| No matching records found | ||||||