MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 55140 bp
Accession: NZ_CP088003 Location: 1..55140 Organism: Staphylococcus epidermidis strain IVK83 Replicon: plasmid pIVK83
Accession: NZ_CP088003 Location: 1..55140 Organism: Staphylococcus epidermidis strain IVK83 Replicon: plasmid pIVK83
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQF30_RS11945 (LQF30_11905) | 1155..16676 | + | 15522 | WP_162158608.1 | non-ribosomal peptide synthetase | - |
| LQF30_RS11950 (LQF30_11910) | 16725..17996 | + | 1272 | WP_162158609.1 | ACP S-malonyltransferase | - |
| LQF30_RS11955 (LQF30_11915) | 18030..22388 | + | 4359 | WP_162158610.1 | Polyketide synthase PksN | VF |
| LQF30_RS11960 (LQF30_11920) | 22391..27076 | + | 4686 | WP_162158611.1 | Polyketide synthase PksN | VF |
| LQF30_RS11965 (LQF30_11925) | 27069..28571 | + | 1503 | WP_130548392.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| LQF30_RS11970 (LQF30_11930) | 28583..34975 | + | 6393 | WP_263928728.1 | condensation domain-containing protein | - |
| LQF30_RS11975 (LQF30_11935) | 34972..36618 | + | 1647 | WP_162158613.1 | ABC transporter ATP-binding protein | - |
| LQF30_RS11980 (LQF30_11940) | 36665..38383 | + | 1719 | WP_162158614.1 | ABC transporter ATP-binding protein | - |
| LQF30_RS11985 (LQF30_11945) | 38405..39091 | + | 687 | WP_130548374.1 | thioesterase domain-containing protein | - |
| LQF30_RS11990 (LQF30_11950) | 39105..39830 | + | 726 | WP_263928729.1 | 4'-phosphopantetheinyl transferase superfamily protein | - |
| LQF30_RS11995 (LQF30_11955) | 42346..42651 | + | 306 | WP_237615022.1 | hypothetical protein | - |
| LQF30_RS12000 (LQF30_11960) | 42805..43011 | + | 207 | WP_162158616.1 | hypothetical protein | - |
| LQF30_RS12005 (LQF30_11965) | 43645..44988 | + | 1344 | WP_258500271.1 | replication initiator protein A | - |
| LQF30_RS12010 (LQF30_11970) | 45176..45569 | - | 394 | Protein_13 | IS6 family transposase IS431R | Transposase |
| LQF30_RS12015 (LQF30_11975) | 45694..46494 | + | 801 | WP_130548378.1 | ParA family protein | - |
| LQF30_RS12020 (LQF30_11980) | 46494..46694 | + | 201 | WP_130559168.1 | plasmid replication-associated protein | - |
| LQF30_RS12025 (LQF30_11985) | 46810..47045 | + | 236 | Protein_16 | hypothetical protein | - |
| LQF30_RS12030 (LQF30_11990) | 47556..48113 | - | 558 | WP_162158606.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| LQF30_RS12035 (LQF30_11995) | 48633..48940 | + | 308 | Protein_18 | NAD-dependent malic enzyme | - |
| LQF30_RS12040 (LQF30_12000) | 49128..49373 | + | 246 | WP_199798485.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LQF30_RS12045 (LQF30_12005) | 49370..49702 | + | 333 | WP_130548381.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LQF30_RS12050 (LQF30_12010) | 51013..51291 | + | 279 | WP_142589454.1 | hypothetical protein | - |
| LQF30_RS12055 (LQF30_12015) | 51293..51676 | + | 384 | WP_002494738.1 | hypothetical protein | - |
| LQF30_RS12060 (LQF30_12020) | 51688..52461 | + | 774 | WP_162158607.1 | hypothetical protein | Relaxase |
| LQF30_RS12065 (LQF30_12025) | 52446..52790 | - | 345 | WP_237615018.1 | hypothetical protein | - |
| LQF30_RS12070 (LQF30_12030) | 53255..54127 | + | 873 | WP_130548385.1 | Thiamine import ATP-binding protein ThiQ | VF |
| LQF30_RS12075 (LQF30_12035) | 54111..54860 | + | 750 | WP_130548386.1 | ABC transporter permease | - |
| LQF30_RS12080 (LQF30_12040) | 54860..55018 | + | 159 | WP_237615016.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|