MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 104085 bp
Accession: NZ_CP087994 Location: 2056056..2160140 Organism: Acetobacterium wieringae strain Y Replicon: chromosome
Accession: NZ_CP087994 Location: 2056056..2160140 Organism: Acetobacterium wieringae strain Y Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNN31_RS09555 (LNN31_09530) | 2052128..2052601 | + | 474 | WP_228879688.1 | acetyl-CoA carboxylase biotin carboxyl carrier protein | - |
| LNN31_RS09560 (LNN31_09535) | 2052715..2053131 | + | 417 | WP_228879687.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| LNN31_RS09565 (LNN31_09540) | 2053144..2054496 | + | 1353 | WP_228879685.1 | acetyl-CoA carboxylase biotin carboxylase subunit | - |
| LNN31_RS09570 (LNN31_09545) | 2054512..2055399 | + | 888 | WP_228879683.1 | acetyl-CoA carboxylase, carboxyltransferase subunit beta | - |
| LNN31_RS09575 (LNN31_09550) | 2055386..2056177 | + | 792 | WP_228879680.1 | acetyl-CoA carboxylase carboxyltransferase subunit alpha | - |
| LNN31_RS09580 (LNN31_09555) | 2056319..2056963 | + | 645 | WP_070372249.1 | ethanolamine utilization microcompartment protein EutL | - |
| LNN31_RS09585 (LNN31_09560) | 2057025..2057612 | - | 588 | WP_148637120.1 | zinc ribbon domain-containing protein | - |
| LNN31_RS09590 (LNN31_09565) | 2057673..2058167 | - | 495 | WP_148637119.1 | Peptidyl-prolyl cis-trans isomerase B | VF |
| LNN31_RS09595 (LNN31_09570) | 2058278..2059510 | - | 1233 | WP_228879678.1 | FAD-dependent oxidoreductase | - |
| LNN31_RS09600 (LNN31_09575) | 2059507..2059956 | - | 450 | WP_228879676.1 | 4Fe-4S dicluster domain-containing protein | - |
| LNN31_RS09605 (LNN31_09580) | 2059969..2061852 | - | 1884 | WP_228879673.1 | anaerobic carbon-monoxide dehydrogenase catalytic subunit | - |
| LNN31_RS09610 (LNN31_09585) | 2062100..2062513 | - | 414 | WP_070372254.1 | transcriptional repressor | - |
| LNN31_RS09615 (LNN31_09590) | 2062742..2063230 | - | 489 | WP_228879670.1 | zinc ribbon domain-containing protein | - |
| LNN31_RS09620 (LNN31_09595) | 2063424..2065925 | - | 2502 | WP_228879667.1 | FAD-dependent oxidoreductase | - |
| LNN31_RS09625 (LNN31_09600) | 2065922..2066212 | - | 291 | WP_070372257.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LNN31_RS09630 (LNN31_09605) | 2066637..2067062 | - | 426 | WP_139142390.1 | MarR family transcriptional regulator | - |
| LNN31_RS09635 (LNN31_09610) | 2067138..2067617 | - | 480 | WP_148637113.1 | glutathione peroxidase | - |
| LNN31_RS09640 (LNN31_09615) | 2067778..2069064 | - | 1287 | WP_228879664.1 | helix-turn-helix transcriptional regulator | - |
| LNN31_RS09645 (LNN31_09620) | 2069361..2070353 | - | 993 | WP_228879661.1 | sensor domain-containing diguanylate cyclase | - |
| LNN31_RS09650 (LNN31_09625) | 2070552..2072435 | - | 1884 | WP_228879659.1 | leucine-rich repeat domain-containing protein | - |
| LNN31_RS09655 (LNN31_09630) | 2072486..2073313 | - | 828 | WP_070372262.1 | Chemotaxis protein methyltransferase 1 | VF |
| LNN31_RS09660 (LNN31_09635) | 2073547..2073948 | + | 402 | WP_070372263.1 | bacteriohemerythrin | - |
| LNN31_RS09665 (LNN31_09640) | 2074030..2074425 | - | 396 | WP_228879657.1 | response regulator | - |
| LNN31_RS09670 (LNN31_09645) | 2074427..2077594 | - | 3168 | WP_228879654.1 | PAS domain-containing hybrid sensor histidine kinase/response regulator | - |
| LNN31_RS09675 (LNN31_09650) | 2077651..2079375 | - | 1725 | WP_228879652.1 | Methyl-accepting chemotaxis protein I | VF |
| LNN31_RS09680 (LNN31_09655) | 2079359..2079880 | - | 522 | WP_070372266.1 | Chemotaxis protein CheW | VF |
| LNN31_RS09685 (LNN31_09660) | 2079965..2082076 | - | 2112 | WP_228879648.1 | Chemotaxis protein CheA | VF |
| LNN31_RS09690 (LNN31_09665) | 2082531..2083481 | - | 951 | WP_228879645.1 | Methyl-accepting chemotaxis protein CtpH | VF |
| LNN31_RS09695 (LNN31_09670) | 2083498..2084598 | - | 1101 | WP_228879643.1 | FIST N-terminal domain-containing protein | - |
| LNN31_RS09700 (LNN31_09675) | 2084944..2085822 | - | 879 | WP_228879640.1 | Transposon Tn10 TetD protein | VF |
| LNN31_RS09705 (LNN31_09680) | 2085889..2086323 | - | 435 | WP_228879637.1 | BRO family protein | - |
| LNN31_RS09710 (LNN31_09685) | 2086866..2087141 | + | 276 | WP_070372269.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LNN31_RS09715 (LNN31_09690) | 2087138..2087413 | + | 276 | WP_070372270.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| LNN31_RS09720 (LNN31_09695) | 2087699..2088052 | + | 354 | WP_148637101.1 | HNH endonuclease signature motif containing protein | - |
| LNN31_RS09725 (LNN31_09700) | 2088057..2088371 | - | 315 | WP_070372272.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LNN31_RS09730 (LNN31_09705) | 2088358..2088630 | - | 273 | WP_070372273.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| LNN31_RS09735 (LNN31_09710) | 2088693..2089216 | + | 524 | Protein_1885 | ParB N-terminal domain-containing protein | - |
| LNN31_RS09740 (LNN31_09715) | 2089557..2090012 | + | 456 | WP_070372276.1 | IS21 family transposase ISAs29 | Transposase |
| LNN31_RS09745 (LNN31_09720) | 2089975..2091548 | + | 1574 | Protein_1887 | Transposon Tn3 resolvase ; Integrase | Integrase |
| LNN31_RS09750 (LNN31_09725) | 2091653..2092609 | - | 957 | WP_148637098.1 | hypothetical protein | - |
| LNN31_RS09755 (LNN31_09730) | 2092713..2093297 | - | 585 | WP_228879883.1 | Fic family protein | - |
| LNN31_RS09760 (LNN31_09735) | 2093298..2093612 | - | 315 | Protein_1890 | BRO family protein | - |
| LNN31_RS09765 (LNN31_09740) | 2093646..2093873 | - | 228 | WP_228879635.1 | hypothetical protein | - |
| LNN31_RS09770 (LNN31_09745) | 2094138..2095811 | - | 1674 | WP_263992342.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| LNN31_RS09775 (LNN31_09750) | 2095874..2096044 | - | 171 | WP_263992343.1 | hypothetical protein | - |
| LNN31_RS09780 (LNN31_09755) | 2096152..2096508 | - | 357 | WP_263992344.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| LNN31_RS09785 (LNN31_09760) | 2096936..2097175 | - | 240 | WP_263992345.1 | helix-turn-helix domain-containing protein | - |
| LNN31_RS09790 (LNN31_09765) | 2097168..2097593 | - | 426 | WP_263992346.1 | sigma-70 family RNA polymerase sigma factor | - |
| LNN31_RS09795 (LNN31_09770) | 2098054..2099034 | - | 981 | WP_263992347.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| LNN31_RS09800 (LNN31_09775) | 2099081..2099251 | - | 171 | WP_263992348.1 | cysteine-rich KTR domain-containing protein | - |
| LNN31_RS09805 (LNN31_09780) | 2099690..2100043 | + | 354 | WP_263992349.1 | helix-turn-helix domain-containing protein | - |
| LNN31_RS09810 (LNN31_09785) | 2100293..2101585 | - | 1293 | WP_263992350.1 | relaxase/mobilization nuclease domain-containing protein | - |
| LNN31_RS09815 (LNN31_09790) | 2101651..2101977 | - | 327 | WP_263992351.1 | hypothetical protein | - |
| LNN31_RS09820 (LNN31_09795) | 2101970..2102758 | - | 789 | WP_263992352.1 | IS21 family transposase IS1474 | Transposase |
| LNN31_RS09825 (LNN31_09800) | 2102755..2104197 | - | 1443 | WP_263992353.1 | IS21 family transposase ISIde2 | Transposase |
| LNN31_RS09830 (LNN31_09805) | 2104258..2104548 | + | 291 | WP_263992354.1 | IS3 family transposase ISPar1 | Transposase |
| LNN31_RS09835 (LNN31_09810) | 2104545..2105438 | + | 894 | WP_263993166.1 | IS3 family transposase ISCce4 | Transposase |
| LNN31_RS09840 (LNN31_09815) | 2105485..2105667 | - | 183 | WP_263992355.1 | hypothetical protein | - |
| LNN31_RS09845 (LNN31_09820) | 2105832..2105978 | - | 147 | Protein_1907 | relaxase | - |
| LNN31_RS09850 (LNN31_09825) | 2106208..2106861 | - | 654 | WP_263992356.1 | IS1182 family transposase ISDre5 | Transposase |
| LNN31_RS09855 (LNN31_09830) | 2106865..2107407 | - | 543 | WP_263992357.1 | IS1182 family transposase ISDre5 | Transposase |
| LNN31_RS09860 (LNN31_09835) | 2108014..2109759 | - | 1746 | WP_263992358.1 | type I restriction-modification system subunit M | - |
| LNN31_RS09865 (LNN31_09840) | 2109752..2110864 | - | 1113 | WP_263992359.1 | AAA family ATPase | - |
| LNN31_RS09870 (LNN31_09845) | 2110861..2112060 | - | 1200 | WP_263992360.1 | restriction endonuclease subunit S | - |
| LNN31_RS09875 (LNN31_09850) | 2112053..2115061 | - | 3009 | WP_263992361.1 | type I restriction endonuclease subunit R | - |
| LNN31_RS09880 (LNN31_09855) | 2115112..2115327 | - | 216 | WP_263992362.1 | helix-turn-helix transcriptional regulator | - |
| LNN31_RS09885 (LNN31_09860) | 2115696..2115980 | - | 285 | WP_263992364.1 | CD1845 family protein | - |
| LNN31_RS09890 (LNN31_09865) | 2116064..2116399 | - | 336 | WP_263992365.1 | plasmid mobilization relaxosome protein MobC | - |
| LNN31_RS09895 (LNN31_09870) | 2116399..2121339 | - | 4941 | Protein_1917 | helicase-related protein | - |
| LNN31_RS09900 (LNN31_09875) | 2122713..2123072 | - | 360 | WP_263992367.1 | TnpV protein | - |
| LNN31_RS09905 (LNN31_09880) | 2123989..2124759 | - | 771 | WP_263992369.1 | hypothetical protein | - |
| LNN31_RS09910 (LNN31_09885) | 2125029..2126213 | - | 1185 | WP_263992370.1 | PIN domain-containing protein | - |
| LNN31_RS09915 (LNN31_09890) | 2126291..2126509 | - | 219 | WP_263992371.1 | transposon-transfer assisting family protein | - |
| LNN31_RS09920 (LNN31_09895) | 2126512..2128125 | - | 1614 | WP_263992374.1 | DNA repair protein RadC | - |
| LNN31_RS09925 (LNN31_09900) | 2128115..2128297 | - | 183 | WP_263992375.1 | hypothetical protein | - |
| LNN31_RS09930 (LNN31_09905) | 2128301..2128669 | - | 369 | WP_263992376.1 | hypothetical protein | - |
| LNN31_RS09935 (LNN31_09910) | 2128826..2129719 | - | 894 | WP_263993166.1 | IS3 family transposase ISCce4 | Transposase |
| LNN31_RS09940 (LNN31_09915) | 2129716..2130006 | - | 291 | WP_263992354.1 | IS3 family transposase ISPar1 | Transposase |
| LNN31_RS09945 (LNN31_09920) | 2130080..2131735 | - | 1656 | Protein_1927 | DNA topoisomerase III | - |
| LNN31_RS09950 (LNN31_09925) | 2131898..2132623 | - | 726 | WP_263992377.1 | DUF4366 domain-containing protein | - |
| LNN31_RS09955 (LNN31_09930) | 2132610..2132861 | - | 252 | WP_263992378.1 | DUF4315 family protein | - |
| LNN31_RS09960 (LNN31_09935) | 2132872..2134251 | - | 1380 | WP_263992379.1 | hypothetical protein | VF |
| LNN31_RS09965 (LNN31_09940) | 2134432..2135325 | - | 894 | WP_263993166.1 | IS3 family transposase ISCce4 | Transposase |
| LNN31_RS09970 (LNN31_09945) | 2135322..2135612 | - | 291 | WP_263992354.1 | IS3 family transposase ISPar1 | Transposase |
| LNN31_RS09975 (LNN31_09950) | 2135671..2135994 | - | 324 | WP_263992380.1 | hypothetical protein | - |
| LNN31_RS09980 (LNN31_09955) | 2136005..2138404 | - | 2400 | WP_263992381.1 | ATP-binding protein | - |
| LNN31_RS09985 (LNN31_09960) | 2138355..2138756 | - | 402 | WP_263992382.1 | PrgI family protein | - |
| LNN31_RS09990 (LNN31_09965) | 2138780..2139649 | - | 870 | WP_263992383.1 | CD0415/CD1112 family protein | - |
| LNN31_RS09995 (LNN31_09970) | 2139663..2139824 | - | 162 | WP_120151301.1 | Maff2 family protein | - |
| LNN31_RS10000 (LNN31_09975) | 2139846..2141456 | - | 1611 | WP_002569232.1 | hypothetical protein ; Integrase | Integrase |
| LNN31_RS10005 (LNN31_09980) | 2141568..2141756 | - | 189 | WP_002569233.1 | transposon-encoded TnpW family protein | - |
| LNN31_RS10010 (LNN31_09985) | 2141753..2142607 | - | 855 | WP_002569234.1 | ATP-binding protein | - |
| LNN31_RS10015 (LNN31_09990) | 2142604..2143353 | - | 750 | WP_002569235.1 | phage replisome organizer N-terminal domain-containing protein | - |
| LNN31_RS10020 (LNN31_09995) | 2143343..2143555 | - | 213 | WP_002569236.1 | hypothetical protein | - |
| LNN31_RS10025 (LNN31_10000) | 2143741..2145363 | - | 1623 | WP_002569237.1 | relaxase/mobilization nuclease domain-containing protein | - |
| LNN31_RS10030 (LNN31_10005) | 2145335..2145733 | - | 399 | WP_002569238.1 | plasmid mobilization relaxosome protein MobC | - |
| LNN31_RS10035 (LNN31_10010) | 2146358..2146561 | - | 204 | WP_003505336.1 | helix-turn-helix domain-containing protein | - |
| LNN31_RS10040 (LNN31_10015) | 2146551..2146997 | - | 447 | WP_003505338.1 | sigma-70 family RNA polymerase sigma factor | - |
| LNN31_RS10045 (LNN31_10020) | 2147202..2147969 | - | 768 | WP_003505400.1 | class I SAM-dependent methyltransferase | - |
| LNN31_RS10050 (LNN31_10025) | 2148183..2148638 | - | 456 | WP_003505401.1 | XRE family transcriptional regulator | - |
| LNN31_RS10055 (LNN31_10030) | 2148720..2150639 | - | 1920 | WP_003505402.1 | Peptide chain release factor 3 | VF |
| LNN31_RS10060 (LNN31_10035) | 2151001..2151522 | - | 522 | WP_003505403.1 | AAA family ATPase | - |
| LNN31_RS10065 (LNN31_10040) | 2151785..2151925 | - | 141 | WP_263992389.1 | Maff2 family protein | - |
| LNN31_RS10070 (LNN31_10045) | 2151970..2153745 | - | 1776 | WP_263992390.1 | type IV secretory system conjugative DNA transfer family protein | - |
| LNN31_RS10075 (LNN31_10050) | 2153742..2154221 | - | 480 | WP_263992391.1 | PcfB family protein | - |
| LNN31_RS10080 (LNN31_10055) | 2154290..2155201 | - | 912 | WP_263992392.1 | helix-turn-helix domain-containing protein | - |
| LNN31_RS10085 (LNN31_10060) | 2155286..2156209 | - | 924 | WP_263992393.1 | ParB/RepB/Spo0J family partition protein | - |
| LNN31_RS10090 (LNN31_10065) | 2156166..2156987 | - | 822 | WP_263992394.1 | Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein | VF |
| LNN31_RS10095 (LNN31_10070) | 2157061..2157753 | - | 693 | WP_263992395.1 | hypothetical protein | - |
| LNN31_RS10100 (LNN31_10075) | 2157753..2160686 | - | 2934 | WP_263992396.1 | SAM-dependent methyltransferase | - |
| LNN31_RS10105 (LNN31_10080) | 2160704..2160931 | - | 228 | WP_263992397.1 | helix-turn-helix transcriptional regulator | - |
| LNN31_RS10110 (LNN31_10085) | 2161203..2162879 | - | 1677 | WP_263992398.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| LNN31_RS10115 (LNN31_10090) | 2162906..2163280 | - | 375 | WP_070372282.1 | metal-dependent transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|