MGE detailed information
MGE type: Genomic_island MGE length: 21298 bp
Accession: NZ_CP087993 Location: 1607244..1628541 Organism: Xylella fastidiosa subsp. multiplex strain CFBP8416 Replicon: chromosome
Accession: NZ_CP087993 Location: 1607244..1628541 Organism: Xylella fastidiosa subsp. multiplex strain CFBP8416 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XYFPCFBP8416_RS07175 (XYFPCFBP8416_007125) | 1602560..1603381 | + | 822 | WP_162522144.1 | hypothetical protein | - |
| XYFPCFBP8416_RS07180 (XYFPCFBP8416_007130) | 1603631..1603951 | - | 321 | WP_225621864.1 | GH25 family lysozyme | - |
| XYFPCFBP8416_RS07185 (XYFPCFBP8416_007135) | 1604160..1604342 | + | 183 | WP_027700467.1 | hypothetical protein | - |
| XYFPCFBP8416_RS07190 (XYFPCFBP8416_007140) | 1604626..1605552 | - | 927 | WP_004085766.1 | Grx4 family monothiol glutaredoxin | - |
| XYFPCFBP8416_RS07195 (XYFPCFBP8416_007145) | 1605651..1606394 | + | 744 | WP_225621865.1 | polysaccharide deacetylase family protein | - |
| XYFPCFBP8416_RS07200 (XYFPCFBP8416_007150) | 1607038..1607229 | - | 192 | WP_021358405.1 | hypothetical protein | - |
| XYFPCFBP8416_RS07205 (XYFPCFBP8416_007155) | 1607647..1608066 | - | 420 | WP_004085763.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| XYFPCFBP8416_RS07210 (XYFPCFBP8416_007160) | 1608066..1608305 | - | 240 | WP_004085761.1 | ribbon-helix-helix domain-containing protein | - |
| XYFPCFBP8416_RS07215 (XYFPCFBP8416_007165) | 1608750..1608992 | + | 243 | WP_004085758.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| XYFPCFBP8416_RS07220 (XYFPCFBP8416_007170) | 1608985..1609272 | + | 288 | WP_004085905.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| XYFPCFBP8416_RS07225 (XYFPCFBP8416_007175) | 1609360..1609926 | + | 567 | WP_004085755.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| XYFPCFBP8416_RS07230 (XYFPCFBP8416_007180) | 1609979..1611169 | - | 1191 | WP_278279195.1 | IS607 family transposase ISCARN56 | Transposase |
| XYFPCFBP8416_RS07235 (XYFPCFBP8416_007185) | 1611169..1611795 | - | 627 | WP_038230952.1 | IS607 family transposase ISCfe1 | Transposase |
| XYFPCFBP8416_RS07240 (XYFPCFBP8416_007190) | 1612025..1613299 | - | 1275 | WP_012337985.1 | pyridoxal phosphate-dependent aminotransferase | - |
| XYFPCFBP8416_RS07245 (XYFPCFBP8416_007195) | 1613704..1615866 | + | 2163 | WP_012337986.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| XYFPCFBP8416_RS07250 (XYFPCFBP8416_007200) | 1615863..1617284 | + | 1422 | WP_004085930.1 | hypothetical protein | VF |
| XYFPCFBP8416_RS07255 (XYFPCFBP8416_007205) | 1617811..1618434 | + | 624 | WP_004086041.1 | hypothetical protein | - |
| XYFPCFBP8416_RS07260 (XYFPCFBP8416_007210) | 1618431..1618703 | + | 273 | WP_021358268.1 | hypothetical protein | - |
| XYFPCFBP8416_RS07265 (XYFPCFBP8416_007215) | 1618706..1619323 | + | 618 | WP_004086046.1 | hypothetical protein | - |
| XYFPCFBP8416_RS07270 (XYFPCFBP8416_007220) | 1619323..1620627 | + | 1305 | WP_228762200.1 | bacteriocin | - |
| XYFPCFBP8416_RS07275 (XYFPCFBP8416_007225) | 1621347..1621589 | + | 243 | WP_154128367.1 | hypothetical protein | - |
| XYFPCFBP8416_RS07280 (XYFPCFBP8416_007230) | 1621679..1623433 | - | 1755 | WP_154128369.1 | hypothetical protein | - |
| XYFPCFBP8416_RS07290 (XYFPCFBP8416_007240) | 1624053..1625003 | - | 951 | WP_012337991.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| XYFPCFBP8416_RS07295 (XYFPCFBP8416_007245) | 1625062..1625565 | - | 504 | WP_004085935.1 | Lipoprotein signal peptidase | VF |
| XYFPCFBP8416_RS07300 (XYFPCFBP8416_007250) | 1625710..1628541 | - | 2832 | WP_004085936.1 | isoleucine--tRNA ligase | - |
| XYFPCFBP8416_RS07305 (XYFPCFBP8416_007255) | 1628538..1629485 | - | 948 | WP_004085938.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| XYFPCFBP8416_RS07310 (XYFPCFBP8416_007260) | 1629647..1631257 | - | 1611 | WP_004085940.1 | murein biosynthesis integral membrane protein MurJ | - |
| XYFPCFBP8416_RS07315 (XYFPCFBP8416_007265) | 1631357..1631626 | + | 270 | WP_010894866.1 | 30S ribosomal protein S20 | - |
| XYFPCFBP8416_RS07320 (XYFPCFBP8416_007270) | 1631743..1632816 | - | 1074 | WP_004085947.1 | GTPase ObgE | - |
| XYFPCFBP8416_RS07325 (XYFPCFBP8416_007275) | 1632991..1633248 | - | 258 | WP_004085949.1 | 50S ribosomal protein L27 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|