MGE detailed information
MGE type: Prophage MGE length: 38986 bp
Accession: NZ_CP087992 Location: 445297..484282 Organism: Xylella fastidiosa subsp. multiplex strain CFBP8433 Replicon: chromosome
Accession: NZ_CP087992 Location: 445297..484282 Organism: Xylella fastidiosa subsp. multiplex strain CFBP8433 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOK81_RS01815 (LOK81_01800) | 440669..442459 | + | 1791 | WP_004085196.1 | succinate dehydrogenase flavoprotein subunit | - |
| LOK81_RS01820 (LOK81_01805) | 442480..443265 | + | 786 | WP_004085195.1 | succinate dehydrogenase iron-sulfur subunit | - |
| LOK81_RS01825 (LOK81_01810) | 443386..443634 | + | 249 | WP_004085194.1 | succinate dehydrogenase assembly factor 2 | - |
| LOK81_RS01830 (LOK81_01815) | 443585..444037 | + | 453 | WP_004085193.1 | hypothetical protein | - |
| LOK81_RS01835 (LOK81_01820) | 444063..445304 | + | 1242 | WP_004085192.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| LOK81_RS01840 (LOK81_01825) | 445297..446019 | + | 723 | WP_004085191.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| LOK81_RS01845 (LOK81_01830) | 446367..448844 | + | 2478 | WP_012337634.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| LOK81_RS01850 (LOK81_01835) | 448829..449491 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| LOK81_RS01855 (LOK81_01840) | 449496..449933 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| LOK81_RS01860 (LOK81_01845) | 449951..451699 | + | 1749 | WP_004085187.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| LOK81_RS01865 (LOK81_01850) | 451696..452715 | + | 1020 | WP_004085186.1 | Tetraacyldisaccharide 4'-kinase | VF |
| LOK81_RS01870 (LOK81_01855) | 453090..454172 | - | 1083 | WP_012337635.1 | phage late control D family protein | - |
| LOK81_RS01875 (LOK81_01860) | 454163..454381 | - | 219 | WP_004085341.1 | tail protein X | - |
| LOK81_RS01880 (LOK81_01865) | 454378..454860 | - | 483 | WP_012337636.1 | phage tail protein | - |
| LOK81_RS01885 (LOK81_01870) | 454857..457112 | - | 2256 | WP_228762217.1 | phage tail tape measure protein | - |
| LOK81_RS01890 (LOK81_01875) | 457203..457490 | - | 288 | WP_012337638.1 | phage tail assembly protein | - |
| LOK81_RS01895 (LOK81_01880) | 457493..458002 | - | 510 | WP_128283754.1 | phage major tail tube protein | - |
| LOK81_RS01900 (LOK81_01885) | 458002..459180 | - | 1179 | WP_154436952.1 | phage tail sheath family protein | - |
| LOK81_RS01905 (LOK81_01890) | 459245..460837 | - | 1593 | WP_154436954.1 | tail fiber domain-containing protein | - |
| LOK81_RS01910 (LOK81_01895) | 460845..461402 | - | 558 | WP_004086970.1 | phage tail protein I | - |
| LOK81_RS01915 (LOK81_01900) | 461395..462288 | - | 894 | WP_154436956.1 | baseplate J/gp47 family protein | - |
| LOK81_RS01920 (LOK81_01905) | 462288..462611 | - | 324 | WP_228762566.1 | GPW/gp25 family protein | - |
| LOK81_RS01925 (LOK81_01910) | 462760..463074 | + | 315 | WP_004087029.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LOK81_RS01930 (LOK81_01915) | 463076..463357 | + | 282 | WP_004087027.1 | XRE family transcriptional regulator | - |
| LOK81_RS01935 (LOK81_01920) | 463369..463668 | + | 300 | WP_004087025.1 | HigA family addiction module antitoxin | - |
| LOK81_RS01940 (LOK81_01925) | 463673..464260 | - | 588 | WP_128283746.1 | phage baseplate assembly protein V | - |
| LOK81_RS01945 (LOK81_01930) | 464257..464799 | - | 543 | WP_154436958.1 | hypothetical protein | - |
| LOK81_RS01950 (LOK81_01935) | 464775..465296 | - | 522 | WP_154436960.1 | hypothetical protein | - |
| LOK81_RS01955 (LOK81_01940) | 465293..465616 | - | 324 | WP_154436962.1 | hypothetical protein | - |
| LOK81_RS01960 (LOK81_01945) | 465616..465876 | - | 261 | WP_012337650.1 | hypothetical protein | - |
| LOK81_RS01965 (LOK81_01950) | 465894..467768 | - | 1875 | WP_154436964.1 | phage major capsid protein | - |
| LOK81_RS01970 (LOK81_01955) | 467765..469351 | - | 1587 | WP_154436966.1 | phage portal protein | - |
| LOK81_RS01975 (LOK81_01960) | 469348..469896 | - | 549 | WP_012337653.1 | hypothetical protein | - |
| LOK81_RS01980 (LOK81_01965) | 469900..471852 | - | 1953 | WP_154436968.1 | phage terminase large subunit family protein | - |
| LOK81_RS01985 (LOK81_01970) | 471845..472378 | - | 534 | WP_050765486.1 | terminase small subunit | - |
| LOK81_RS01990 (LOK81_01975) | 472551..472775 | - | 225 | WP_012337656.1 | hypothetical protein | - |
| LOK81_RS01995 (LOK81_01980) | 472777..473238 | - | 462 | WP_169709972.1 | hypothetical protein | - |
| LOK81_RS02000 (LOK81_01985) | 473228..473557 | - | 330 | WP_004085022.1 | phage holin family protein | - |
| LOK81_RS02005 (LOK81_01990) | 473550..474050 | - | 501 | WP_128382956.1 | lysozyme | - |
| LOK81_RS02010 (LOK81_01995) | 474150..474881 | - | 732 | WP_169709925.1 | site-specific DNA-methyltransferase | - |
| LOK81_RS02015 (LOK81_02000) | 475071..475406 | - | 336 | WP_004085025.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LOK81_RS02020 (LOK81_02005) | 475403..475657 | - | 255 | WP_004089517.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LOK81_RS02025 (LOK81_02010) | 475710..476432 | - | 723 | WP_012337661.1 | hypothetical protein | - |
| LOK81_RS02030 (LOK81_02015) | 476375..476722 | - | 348 | WP_162010044.1 | hypothetical protein | - |
| LOK81_RS02035 (LOK81_02020) | 476910..478178 | + | 1269 | WP_249328055.1 | DNA polymerase | - |
| LOK81_RS02040 (LOK81_02025) | 478178..478453 | + | 276 | WP_201884958.1 | VRR-NUC domain-containing protein | - |
| LOK81_RS02045 (LOK81_02030) | 478455..478859 | - | 405 | WP_004085029.1 | hypothetical protein | - |
| LOK81_RS02050 (LOK81_02035) | 478944..480362 | + | 1419 | WP_169709926.1 | DEAD/DEAH box helicase | - |
| LOK81_RS02055 (LOK81_02040) | 480359..480523 | + | 165 | WP_004086189.1 | hypothetical protein | - |
| LOK81_RS02060 (LOK81_02045) | 480516..480764 | + | 249 | WP_004086191.1 | DUF4224 domain-containing protein | - |
| LOK81_RS02065 (LOK81_02050) | 480764..481783 | + | 1020 | WP_169709927.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LOK81_RS02070 (LOK81_02055) | 482560..483201 | + | 642 | WP_004085684.1 | Chromosome-partitioning ATPase Soj | VF |
| LOK81_RS02075 (LOK81_02060) | 483229..483705 | + | 477 | WP_004085683.1 | histidine phosphatase family protein | - |
| LOK81_RS02080 (LOK81_02065) | 483710..484282 | + | 573 | WP_004085682.1 | YceI family protein | - |
| LOK81_RS02085 (LOK81_02070) | 484279..486237 | + | 1959 | WP_272696034.1 | phospholipase D family protein | - |
| LOK81_RS02090 (LOK81_02075) | 487223..487615 | - | 393 | WP_071869548.1 | helix-turn-helix transcriptional regulator | - |
| LOK81_RS02095 (LOK81_02080) | 487885..488071 | + | 187 | Protein_395 | hypothetical protein | - |
| LOK81_RS02100 (LOK81_02085) | 488052..488237 | + | 186 | WP_237648888.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|