MGE detailed information
MGE type: Prophage MGE length: 24304 bp
Accession: NZ_CP087695 Location: 1900305..1924608 Organism: Xylella taiwanensis strain PLS434 Replicon: chromosome
Accession: NZ_CP087695 Location: 1900305..1924608 Organism: Xylella taiwanensis strain PLS434 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH63_RS07965 (LPH63_07965) | 1896800..1897978 | - | 1179 | WP_038272696.1 | efflux RND transporter periplasmic adaptor subunit | - |
| LPH63_RS07970 (LPH63_07970) | 1897989..1899479 | - | 1491 | WP_038272685.1 | efflux transporter outer membrane subunit | - |
| LPH63_RS07975 (LPH63_07975) | 1899476..1899907 | - | 432 | WP_038272687.1 | MarR family transcriptional regulator | - |
| LPH63_RS07980 (LPH63_07980) | 1900305..1902554 | + | 2250 | WP_038272689.1 | DNA topoisomerase IV subunit A | - |
| LPH63_RS07985 (LPH63_07985) | 1904553..1904744 | - | 192 | WP_038270700.1 | hypothetical protein | - |
| LPH63_RS07990 (LPH63_07990) | 1905354..1907219 | - | 1866 | WP_038270699.1 | RNA polymerase sigma factor RpoD | - |
| LPH63_RS07995 (LPH63_07995) | 1907617..1908543 | + | 927 | WP_038270698.1 | lauroyl acyltransferase | - |
| LPH63_RS08000 (LPH63_08000) | 1909197..1909769 | - | 573 | WP_051482276.1 | hypothetical protein | - |
| LPH63_RS08005 (LPH63_08005) | 1909779..1910123 | - | 345 | WP_038270697.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| LPH63_RS08010 (LPH63_08010) | 1910127..1910507 | - | 381 | WP_038270696.1 | hypothetical protein | - |
| LPH63_RS08015 (LPH63_08015) | 1910685..1911512 | - | 828 | WP_038270695.1 | DUF2303 family protein | - |
| LPH63_RS08020 (LPH63_08020) | 1911516..1911848 | - | 333 | WP_038270693.1 | hypothetical protein | - |
| LPH63_RS08025 (LPH63_08025) | 1912450..1912800 | + | 351 | WP_230428181.1 | hypothetical protein | - |
| LPH63_RS08030 (LPH63_08030) | 1912911..1913102 | - | 192 | WP_051482275.1 | hypothetical protein | - |
| LPH63_RS08035 (LPH63_08035) | 1913180..1913485 | - | 306 | WP_051482274.1 | hypothetical protein | - |
| LPH63_RS08040 (LPH63_08040) | 1913923..1914129 | + | 207 | WP_038270689.1 | phage terminase large subunit family protein | - |
| LPH63_RS08045 (LPH63_08045) | 1914113..1914754 | + | 642 | WP_038270687.1 | phage terminase large subunit family protein | - |
| LPH63_RS08050 (LPH63_08050) | 1914773..1915222 | + | 450 | WP_230428180.1 | hypothetical protein | - |
| LPH63_RS08055 (LPH63_08055) | 1915321..1916705 | + | 1385 | Protein_1594 | phage major capsid protein | - |
| LPH63_RS08060 (LPH63_08060) | 1916744..1916992 | + | 249 | WP_038270686.1 | hypothetical protein | - |
| LPH63_RS08065 (LPH63_08065) | 1917119..1917349 | + | 231 | WP_230428500.1 | hypothetical protein | - |
| LPH63_RS08070 (LPH63_08070) | 1917330..1917623 | + | 294 | WP_038270685.1 | hypothetical protein | - |
| LPH63_RS08075 (LPH63_08075) | 1917713..1918162 | + | 450 | WP_230428179.1 | hypothetical protein | - |
| LPH63_RS08080 (LPH63_08080) | 1918138..1918791 | + | 654 | WP_230428178.1 | hypothetical protein | - |
| LPH63_RS12010 | 1918791..1919000 | + | 210 | WP_230428177.1 | phage baseplate assembly protein V | - |
| LPH63_RS12015 | 1918969..1919250 | + | 282 | WP_268980389.1 | phage baseplate assembly protein V | - |
| LPH63_RS08090 (LPH63_08090) | 1919260..1919559 | - | 300 | WP_081755408.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| LPH63_RS08095 (LPH63_08095) | 1919563..1919841 | - | 279 | WP_038270683.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LPH63_RS08100 (LPH63_08100) | 1919942..1920271 | + | 330 | WP_230428175.1 | GPW/gp25 family protein | - |
| LPH63_RS08105 (LPH63_08105) | 1920271..1921164 | + | 894 | WP_038270682.1 | baseplate J/gp47 family protein | - |
| LPH63_RS08110 (LPH63_08110) | 1921157..1921639 | + | 483 | Protein_1606 | phage tail protein I | - |
| LPH63_RS08115 (LPH63_08115) | 1921712..1921966 | + | 255 | WP_230428278.1 | phage tail protein | - |
| LPH63_RS08120 (LPH63_08120) | 1921963..1922043 | + | 81 | Protein_1608 | tail protein X | - |
| LPH63_RS08125 (LPH63_08125) | 1922231..1922827 | + | 597 | WP_162814073.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| LPH63_RS08130 (LPH63_08130) | 1923514..1924560 | - | 1047 | WP_038270717.1 | Sulfate/thiosulfate import ATP-binding protein CysA | VF |
| LPH63_RS08135 (LPH63_08135) | 1924574..1925518 | - | 945 | WP_051482278.1 | sulfate ABC transporter permease subunit CysW | - |
| LPH63_RS08140 (LPH63_08140) | 1925530..1926390 | - | 861 | WP_038270680.1 | sulfate ABC transporter permease subunit CysT | - |
| LPH63_RS08145 (LPH63_08145) | 1926394..1927497 | - | 1104 | WP_038270679.1 | sulfate ABC transporter substrate-binding protein | - |
| LPH63_RS08150 (LPH63_08150) | 1927834..1928079 | - | 246 | WP_230428174.1 | hypothetical protein | - |
| LPH63_RS08155 (LPH63_08155) | 1928281..1928439 | - | 159 | WP_160165146.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|