MGE detailed information
MGE type: Prophage MGE length: 30022 bp
Accession: NZ_CP087691 Location: 1242191..1272212 Organism: Xylella taiwanensis strain PLS422 Replicon: chromosome
Accession: NZ_CP087691 Location: 1242191..1272212 Organism: Xylella taiwanensis strain PLS422 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH48_RS05260 (LPH48_05260) | 1237692..1238111 | - | 420 | WP_038269965.1 | hypothetical protein | - |
| LPH48_RS05265 (LPH48_05265) | 1238242..1238793 | + | 552 | WP_038272808.1 | putative Fe-S cluster assembly protein SufT | - |
| LPH48_RS05270 (LPH48_05270) | 1238852..1239940 | + | 1089 | WP_038272810.1 | branched-chain amino acid aminotransferase | - |
| LPH48_RS05275 (LPH48_05275) | 1240051..1240368 | - | 318 | WP_152536663.1 | hypothetical protein | - |
| LPH48_RS05280 (LPH48_05280) | 1240532..1240873 | - | 342 | WP_038272812.1 | hypothetical protein | - |
| LPH48_RS05285 (LPH48_05285) | 1241092..1241364 | - | 273 | WP_038272815.1 | DNA-binding transcriptional regulator Fis | - |
| LPH48_RS05290 (LPH48_05290) | 1241450..1242139 | - | 690 | WP_038272817.1 | DUF3426 domain-containing protein | - |
| LPH48_RS05295 (LPH48_05295) | 1242191..1242565 | - | 375 | WP_038272819.1 | helix-turn-helix transcriptional regulator | - |
| LPH48_RS05300 (LPH48_05300) | 1243075..1243341 | + | 267 | WP_114867105.1 | hypothetical protein | - |
| LPH48_RS05305 (LPH48_05305) | 1243616..1244845 | + | 1230 | WP_038272822.1 | O-antigen ligase | - |
| LPH48_RS05310 (LPH48_05310) | 1244885..1245748 | + | 864 | WP_051482381.1 | hypothetical protein | VF |
| LPH48_RS05315 (LPH48_05315) | 1245745..1246779 | + | 1035 | WP_038272823.1 | CDP-glycerol glycerophosphotransferase family protein | - |
| LPH48_RS05320 (LPH48_05320) | 1247628..1248824 | - | 1197 | WP_038272824.1 | GTP cyclohydrolase II RibA | - |
| LPH48_RS05325 (LPH48_05325) | 1248916..1249080 | - | 165 | WP_160165225.1 | hypothetical protein | - |
| LPH48_RS05330 (LPH48_05330) | 1251497..1252048 | + | 552 | WP_038272837.1 | TlpA disulfide reductase family protein | - |
| LPH48_RS05335 (LPH48_05335) | 1252358..1253566 | + | 1209 | WP_038272829.1 | hypothetical protein | - |
| LPH48_RS05340 (LPH48_05340) | 1254068..1254388 | - | 321 | WP_038272832.1 | hypothetical protein | - |
| LPH48_RS05345 (LPH48_05345) | 1254460..1255176 | - | 717 | WP_160165226.1 | portal protein | - |
| LPH48_RS05350 (LPH48_05350) | 1255173..1256279 | - | 1107 | WP_114867106.1 | phage terminase large subunit | - |
| LPH48_RS05355 (LPH48_05355) | 1256276..1256677 | - | 402 | WP_114867107.1 | lysozyme | - |
| LPH48_RS05360 (LPH48_05360) | 1256930..1257265 | - | 336 | WP_038273322.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LPH48_RS05365 (LPH48_05365) | 1257262..1257516 | - | 255 | WP_038273324.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LPH48_RS05370 (LPH48_05370) | 1257618..1258316 | - | 699 | WP_114867108.1 | hypothetical protein | - |
| LPH48_RS05375 (LPH48_05375) | 1258273..1259466 | + | 1194 | WP_230428203.1 | hypothetical protein | - |
| LPH48_RS05380 (LPH48_05380) | 1259470..1259742 | + | 273 | WP_114867070.1 | VRR-NUC domain-containing protein | - |
| LPH48_RS05385 (LPH48_05385) | 1259744..1260094 | - | 351 | WP_114867109.1 | DUF1640 domain-containing protein | - |
| LPH48_RS05390 (LPH48_05390) | 1260170..1261516 | + | 1347 | WP_114867110.1 | DEAD/DEAH box helicase | - |
| LPH48_RS05395 (LPH48_05395) | 1261531..1262415 | + | 885 | WP_114867111.1 | hypothetical protein | - |
| LPH48_RS05400 (LPH48_05400) | 1262479..1263015 | + | 537 | WP_038273354.1 | hypothetical protein | VF |
| LPH48_RS05405 (LPH48_05405) | 1263066..1263302 | + | 237 | WP_069636229.1 | DUF4224 domain-containing protein | - |
| LPH48_RS05410 (LPH48_05410) | 1263315..1264376 | + | 1062 | WP_038273275.1 | hypothetical protein ; Integrase | Integrase |
| LPH48_RS05415 (LPH48_05415) | 1264643..1265407 | - | 765 | WP_038272090.1 | hypothetical protein | VF |
| LPH48_RS05420 (LPH48_05420) | 1265452..1266066 | + | 615 | WP_230428204.1 | class I SAM-dependent methyltransferase | - |
| LPH48_RS05425 (LPH48_05425) | 1266080..1266532 | + | 453 | WP_038272094.1 | ribonuclease HI | - |
| LPH48_RS05430 (LPH48_05430) | 1266529..1267251 | + | 723 | WP_038272095.1 | DNA polymerase III subunit epsilon | - |
| LPH48_RS05435 (LPH48_05435) | 1267302..1268018 | - | 717 | WP_038272160.1 | hypothetical protein | VF |
| LPH48_RS05445 (LPH48_05445) | 1269964..1270371 | + | 408 | WP_038272096.1 | DUF6165 family protein | - |
| LPH48_RS05450 (LPH48_05450) | 1270389..1271441 | - | 1053 | WP_038272098.1 | hypothetical protein | VF |
| LPH48_RS05455 (LPH48_05455) | 1271463..1272212 | + | 750 | WP_038272101.1 | hypothetical protein | VF |
| LPH48_RS05460 (LPH48_05460) | 1272784..1274688 | + | 1905 | WP_230428205.1 | glucans biosynthesis glucosyltransferase MdoH | - |
| LPH48_RS05465 (LPH48_05465) | 1274721..1275392 | + | 672 | WP_038272161.1 | alpha/beta hydrolase | - |
| LPH48_RS05470 (LPH48_05470) | 1275444..1276442 | + | 999 | WP_051482362.1 | sensor histidine kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|